Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:09:44 (837542): wrapper (7.7.26015): starting
19:09:44 (837542): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 19:09:44] Arguments: --nthreads 8
[2026-02-06 19:09:44] Threads: 8
[2026-02-06 19:09:44] Checking for CVMFS
[2026-02-06 19:09:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 19:09:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 19:09:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 19:09:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 19:09:47] 2.13.3.0 10097 62523 161488 155964 1 117 32322873 39288833 6971 16776704 0 32081706 99.667 43059765 40860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 19:09:47] CVMFS is ok
[2026-02-06 19:09:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 19:09:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 19:09:47] Further information can be found at the LHC@home message board.
[2026-02-06 19:09:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 19:09:47] Checking for apptainer binary...
[2026-02-06 19:09:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 19:09:47] Running /usr/bin/apptainer --version
[2026-02-06 19:09:47] apptainer version 1.4.5-2.el9
[2026-02-06 19:09:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 19:09:47] c-210-15.aglt2.org
[2026-02-06 19:09:47] apptainer works
[2026-02-06 19:09:47] Set ATHENA_PROC_NUMBER=8
[2026-02-06 19:09:47] Set ATHENA_CORE_NUMBER=8
[2026-02-06 19:09:47] Starting ATLAS job with PandaID=7004058502
[2026-02-06 19:09:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 00:16:03]  *** The last 200 lines of the pilot log: ***
[2026-02-07 00:16:03] 2026-02-07 05:15:11,300 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 00:16:03] 2026-02-07 05:15:11,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 00:16:03] 2026-02-07 05:15:11,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 00:16:03] 2026-02-07 05:15:11,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 00:16:03] 2026-02-07 05:15:11,492 | INFO     | fitting pss+swap vs Time
[2026-02-07 00:16:03] 2026-02-07 05:15:11,492 | INFO     | sum of square deviations: 8289865353.056831
[2026-02-07 00:16:03] 2026-02-07 05:15:11,547 | INFO     | sum of deviations: 21917209449.080242
[2026-02-07 00:16:03] 2026-02-07 05:15:11,548 | INFO     | mean x: 1770432151.270903
[2026-02-07 00:16:03] 2026-02-07 05:15:11,548 | INFO     | mean y: 2589370.147157191
[2026-02-07 00:16:03] 2026-02-07 05:15:11,548 | INFO     | intersect: -4678178123.92098
[2026-02-07 00:16:03] 2026-02-07 05:15:11,548 | INFO     | chi2: 2.5488218166903582
[2026-02-07 00:16:03] 2026-02-07 05:15:11,549 | INFO     | sum of square deviations: 7881071252.343549
[2026-02-07 00:16:03] 2026-02-07 05:15:11,660 | INFO     | sum of deviations: 41665579866.8129
[2026-02-07 00:16:03] 2026-02-07 05:15:11,661 | INFO     | mean x: 1770431998.792517
[2026-02-07 00:16:03] 2026-02-07 05:15:11,661 | INFO     | mean y: 2596635.9149659863
[2026-02-07 00:16:03] 2026-02-07 05:15:11,661 | INFO     | intersect: -9357308062.639233
[2026-02-07 00:16:03] 2026-02-07 05:15:11,662 | INFO     | chi2: 1.8365260828705108
[2026-02-07 00:16:03] 2026-02-07 05:15:11,662 | INFO     | current chi2=1.8365260828705108 (change=27.946078033213105 %)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,662 | INFO     | sum of square deviations: 7485934137.972304
[2026-02-07 00:16:03] 2026-02-07 05:15:11,696 | INFO     | monitor loop #1231: job 0:7004058502 is in state 'finished'
[2026-02-07 00:16:03] 2026-02-07 05:15:11,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,742 | INFO     | sum of deviations: 41169894086.833916
[2026-02-07 00:16:03] 2026-02-07 05:15:11,742 | INFO     | mean x: 1770431846.3114188
[2026-02-07 00:16:03] 2026-02-07 05:15:11,742 | INFO     | mean y: 2596444.868512111
[2026-02-07 00:16:03] 2026-02-07 05:15:11,742 | INFO     | intersect: -9734129828.326038
[2026-02-07 00:16:03] 2026-02-07 05:15:11,743 | INFO     | chi2: 1.837147358812756
[2026-02-07 00:16:03] 2026-02-07 05:15:11,743 | INFO     | current chi2=1.837147358812756 (change=-0.03382886570683479 %)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,743 | INFO     | right removable region: 288
[2026-02-07 00:16:03] 2026-02-07 05:15:11,744 | INFO     | sum of square deviations: 7880839452.343553
[2026-02-07 00:16:03] 2026-02-07 05:15:11,767 | INFO     | sum of deviations: -33793852522.83675
[2026-02-07 00:16:03] 2026-02-07 05:15:11,767 | INFO     | mean x: 1770432303.792517
[2026-02-07 00:16:03] 2026-02-07 05:15:11,767 | INFO     | mean y: 2610017.3469387754
[2026-02-07 00:16:03] 2026-02-07 05:15:11,767 | INFO     | intersect: 7594406365.671058
[2026-02-07 00:16:03] 2026-02-07 05:15:11,767 | INFO     | chi2: 0.8925399634779593
[2026-02-07 00:16:03] 2026-02-07 05:15:11,768 | INFO     | current chi2=0.8925399634779593 (change=64.98225346183982 %)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,768 | INFO     | sum of square deviations: 7485488226.346022
[2026-02-07 00:16:03] 2026-02-07 05:15:11,797 | INFO     | sum of deviations: -48330400340.390976
[2026-02-07 00:16:03] 2026-02-07 05:15:11,797 | INFO     | mean x: 1770432456.314879
[2026-02-07 00:16:03] 2026-02-07 05:15:11,797 | INFO     | mean y: 2615603.1141868513
[2026-02-07 00:16:03] 2026-02-07 05:15:11,797 | INFO     | intersect: 11433494498.649908
[2026-02-07 00:16:03] 2026-02-07 05:15:11,798 | INFO     | chi2: 0.7830724883429048
[2026-02-07 00:16:03] 2026-02-07 05:15:11,798 | INFO     | current chi2=0.7830724883429048 (change=12.264714143274071 %)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,798 | INFO     | left removable region: 20
[2026-02-07 00:16:03] 2026-02-07 05:15:11,825 | INFO     | sum of square deviations: 5969655034.936555
[2026-02-07 00:16:03] 2026-02-07 05:15:11,827 | INFO     | sum of deviations: -26134327009.53359
[2026-02-07 00:16:03] 2026-02-07 05:15:11,828 | INFO     | mean x: 1770432425.8768656
[2026-02-07 00:16:03] 2026-02-07 05:15:11,828 | INFO     | mean y: 2623397.317164179
[2026-02-07 00:16:03] 2026-02-07 05:15:11,828 | INFO     | intersect: 7753332558.125413
[2026-02-07 00:16:03] 2026-02-07 05:15:11,832 | INFO     | chi2: 0.05384697964217355
[2026-02-07 00:16:03] 2026-02-07 05:15:11,833 | INFO     | current memory leak: -4.38 B/s (using 268 data points, chi2=0.05)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,833 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | ..............................
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . Timing measurements:
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . get job = 0 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . initial setup = 12 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . payload setup = 15 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . stage-in = 0 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . payload execution = 18243 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,834 | INFO     | . stage-out = 5 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,835 | INFO     | . log creation = 0 s
[2026-02-07 00:16:03] 2026-02-07 05:15:11,835 | INFO     | ..............................
[2026-02-07 00:16:03] 2026-02-07 05:15:13,995 | INFO     | 
[2026-02-07 00:16:03] 2026-02-07 05:15:14,026 | INFO     | job summary report
[2026-02-07 00:16:03] 2026-02-07 05:15:14,026 | INFO     | --------------------------------------------------
[2026-02-07 00:16:03] 2026-02-07 05:15:14,026 | INFO     | PanDA job id: 7004058502
[2026-02-07 00:16:03] 2026-02-07 05:15:14,026 | INFO     | task id: 48431096
[2026-02-07 00:16:03] 2026-02-07 05:15:14,026 | INFO     | errors: (none)
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | pilot state: finished 
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | transexitcode: 0
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | exeerrorcode: 0
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | exeerrordiag: 
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | exitcode: 0
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | exitmsg: OK
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | cpuconsumptiontime: 75484 s
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | nevents: 400
[2026-02-07 00:16:03] 2026-02-07 05:15:14,027 | INFO     | neventsw: 0
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | pid: 847356
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | pgrp: 847356
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | corecount: 8
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | event service: False
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | sizes: {0: 2281992, 1: 2282677, 2: 2283138, 14: 2283138, 18264: 2315785, 18265: 2315784, 18271: 2324966, 18274: 2325022, 18277: 2325216}
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | --------------------------------------------------
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | 
[2026-02-07 00:16:03] 2026-02-07 05:15:14,028 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 00:16:03] 2026-02-07 05:15:14,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 00:16:03] 2026-02-07 05:15:14,137 | INFO     | job 7004058502 has completed (purged errors)
[2026-02-07 00:16:03] 2026-02-07 05:15:14,138 | INFO     | overall cleanup function is called
[2026-02-07 00:16:03] 2026-02-07 05:15:15,291 | INFO     | --- collectZombieJob: --- 10, [847356]
[2026-02-07 00:16:03] 2026-02-07 05:15:15,295 | INFO     | zombie collector waiting for pid 847356
[2026-02-07 00:16:03] 2026-02-07 05:15:15,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 00:16:03] 2026-02-07 05:15:15,296 | INFO     | collected zombie processes
[2026-02-07 00:16:03] 2026-02-07 05:15:15,296 | INFO     | will attempt to kill all subprocesses of pid=847356
[2026-02-07 00:16:03] 2026-02-07 05:15:15,384 | INFO     | PID=842533 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 00:16:03] 2026-02-07 05:15:15,384 | INFO     | .. there are 8 such processes running
[2026-02-07 00:16:03] 2026-02-07 05:15:15,592 | INFO     | process IDs to be killed: [847356] (in reverse order)
[2026-02-07 00:16:03] 2026-02-07 05:15:15,670 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 00:16:03] 2026-02-07 05:15:15,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 00:16:03] 2026-02-07 05:15:15,687 | INFO     | did not find any defunct processes belonging to 847356
[2026-02-07 00:16:03] 2026-02-07 05:15:15,703 | INFO     | did not find any defunct processes belonging to 847356
[2026-02-07 00:16:03] 2026-02-07 05:15:15,703 | INFO     | ready for new job
[2026-02-07 00:16:03] 2026-02-07 05:15:15,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 00:16:03] 2026-02-07 05:15:15,710 | INFO     | **************************************
[2026-02-07 00:16:03] 2026-02-07 05:15:15,710 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 00:16:03] 2026-02-07 05:15:15,710 | INFO     | **************************************
[2026-02-07 00:16:03] 2026-02-07 05:15:15,710 | INFO     | 
[2026-02-07 00:16:03] 2026-02-07 05:15:15,712 | INFO     | architecture information:
[2026-02-07 00:16:03] 2026-02-07 05:15:15,716 | INFO     | executing command: cat /etc/os-release
[2026-02-07 00:16:03] 2026-02-07 05:15:15,849 | INFO     | cat /etc/os-release:
[2026-02-07 00:16:03] NAME="CentOS Linux"
[2026-02-07 00:16:03] VERSION="7 (Core)"
[2026-02-07 00:16:03] ID="centos"
[2026-02-07 00:16:03] ID_LIKE="rhel fedora"
[2026-02-07 00:16:03] VERSION_ID="7"
[2026-02-07 00:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 00:16:03] ANSI_COLOR="0;31"
[2026-02-07 00:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 00:16:03] HOME_URL="https://www.centos.org/"
[2026-02-07 00:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 00:16:03] 
[2026-02-07 00:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 00:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 00:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 00:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 00:16:03] 
[2026-02-07 00:16:03] 2026-02-07 05:15:15,850 | INFO     | **************************************
[2026-02-07 00:16:03] 2026-02-07 05:15:16,353 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 00:16:03] 2026-02-07 05:15:16,591 | INFO     | sufficient remaining disk space (49740251136 B)
[2026-02-07 00:16:03] 2026-02-07 05:15:16,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 00:16:03] 2026-02-07 05:15:16,591 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 00:16:03] 2026-02-07 05:15:16,591 | INFO     | update_server=False
[2026-02-07 00:16:03] 2026-02-07 05:15:16,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 00:16:03] 2026-02-07 05:15:16,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 00:16:03] 2026-02-07 05:15:16,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 00:16:03] 2026-02-07 05:15:16,957 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 00:16:03] 2026-02-07 05:15:16,957 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 00:16:03] 2026-02-07 05:15:16,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 00:16:03] 2026-02-07 05:15:16,958 | INFO     | will abort loop
[2026-02-07 00:16:03] 2026-02-07 05:15:17,307 | INFO     | all data control threads have been joined
[2026-02-07 00:16:03] 2026-02-07 05:15:17,413 | INFO     | all job control threads have been joined
[2026-02-07 00:16:03] 2026-02-07 05:15:17,597 | INFO     | [job] retrieve thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:17,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:17,963 | INFO     | [job] job monitor thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,014 | INFO     | all payload control threads have been joined
[2026-02-07 00:16:03] 2026-02-07 05:15:18,313 | INFO     | [data] control thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,420 | INFO     | [job] control thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,587 | INFO     | [payload] failed_post thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,621 | INFO     | [data] copytool_out thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,912 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,920 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,959 | INFO     | [data] copytool_in thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,964 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:18,969 | INFO     | [job] validate thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:19,020 | INFO     | [payload] control thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:19,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 00:16:03] 2026-02-07 05:15:19,193 | INFO     | [payload] validate_post thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:20,042 | INFO     | [job] queue monitor thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:20,649 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 00:16:03] 2026-02-07 05:15:48,434 | INFO     | PID=842533 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 00:16:03] 2026-02-07 05:15:48,434 | INFO     | .. there are 8 such processes running
[2026-02-07 00:16:03] 2026-02-07 05:15:48,435 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 00:16:03] 2026-02-07 05:15:48,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 00:16:03] 2026-02-07 05:15:48,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 00:16:03] 2026-02-07 05:15:53,627 | INFO     | [monitor] cgroup control has ended
[2026-02-07 00:16:03] 2026-02-07 05:15:55,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714801424192)>', '<ExcThread(monitor, started 140714428049152)>']
[2026-02-07 00:16:03] 2026-02-07 05:15:56,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 00:16:03] 2026-02-07 05:15:56,572 | INFO     | [monitor] control thread has ended
[2026-02-07 00:16:03] 2026-02-07 05:16:00,736 | INFO     | all workflow threads have been joined
[2026-02-07 00:16:03] 2026-02-07 05:16:00,736 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 00:16:03] 2026-02-07 05:16:00,737 | INFO     | traces error code: 0
[2026-02-07 00:16:03] 2026-02-07 05:16:00,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 00:16:03] 2026-02-07 05:16:01,554 [wrapper] ==== pilot stdout END ====
[2026-02-07 00:16:03] 2026-02-07 05:16:01,577 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 00:16:03] 2026-02-07 05:16:01,592 [wrapper] pilotpid: 842533
[2026-02-07 00:16:03] 2026-02-07 05:16:01,612 [wrapper] Pilot exit status: 0
[2026-02-07 00:16:03] 2026-02-07 05:16:01,901 [wrapper] pandaids: 7004058502
[2026-02-07 00:16:03] 2026-02-07 05:16:02,822 [wrapper] cleanup supervisor_pilot 1299829 842534
[2026-02-07 00:16:03] 2026-02-07 05:16:02,879 [wrapper] Test setup, not cleaning
[2026-02-07 00:16:03] 2026-02-07 05:16:02,930 [wrapper] apfmon messages muted
[2026-02-07 00:16:03] 2026-02-07 05:16:03,019 [wrapper] ==== wrapper stdout END ====
[2026-02-07 00:16:03] 2026-02-07 05:16:03,088 [wrapper] ==== wrapper stderr END ====
[2026-02-07 00:16:03]  *** Error codes and diagnostics ***
[2026-02-07 00:16:03]     "exeErrorCode": 0,
[2026-02-07 00:16:03]     "exeErrorDiag": "",
[2026-02-07 00:16:03]     "pilotErrorCode": 0,
[2026-02-07 00:16:03]     "pilotErrorDiag": "",
[2026-02-07 00:16:03]  *** Listing of results directory ***
[2026-02-07 00:16:03] total 945008
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 11:59 pilot3.tar.gz
[2026-02-07 00:16:03] -rwx------. 1 boincer umatlas     36322 Feb  6 12:00 runpilot2-wrapper.sh
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 12:00 queuedata.json
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas       100 Feb  6 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 00:16:03] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 19:09 run_atlas
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas       105 Feb  6 19:09 job.xml
[2026-02-07 00:16:03] -rw-r--r--. 2 boincer umatlas 672707469 Feb  6 19:09 EVNT.48431094._000284.pool.root.1
[2026-02-07 00:16:03] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 19:09 start_atlas.sh
[2026-02-07 00:16:03] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 19:09 shared
[2026-02-07 00:16:03] -rw-r--r--. 2 boincer umatlas    597948 Feb  6 19:09 input.tar.gz
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas         0 Feb  6 19:09 boinc_lockfile
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas      2554 Feb  6 19:09 pandaJob.out
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas        57 Feb  6 19:09 setup.sh.local
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas   1009520 Feb  6 19:10 agis_schedconf.cvmfs.json
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas       433 Feb  6 19:10 workernode_map.json
[2026-02-07 00:16:03] drwx------. 5 boincer umatlas      4096 Feb  6 19:10 pilot3
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas      6663 Feb  7 00:09 init_data.xml
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas 285049554 Feb  7 00:13 HITS.48431096._006785.pool.root.1
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas       531 Feb  7 00:13 boinc_task_state.xml
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas      1042 Feb  7 00:14 memory_monitor_summary.json
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas   1513088 Feb  7 00:15 agis_ddmendpoints.agis.ALL.json
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas    551160 Feb  7 00:15 log.48431096._006785.job.log.tgz.1
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas      6385 Feb  7 00:15 heartbeat.json
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas        95 Feb  7 00:15 pilot_heartbeat.json
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 00:15 boinc_mmap_file
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas        28 Feb  7 00:15 wrapper_checkpoint.txt
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas      5004 Feb  7 00:16 pilotlog.txt
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas   2440446 Feb  7 00:16 log.48431096._006785.job.log.1
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas       357 Feb  7 00:16 output.list
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas       620 Feb  7 00:16 runtime_log
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas   3010560 Feb  7 00:16 result.tar.gz
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas      9342 Feb  7 00:16 runtime_log.err
[2026-02-07 00:16:03] -rw-------. 1 boincer umatlas       657 Feb  7 00:16 MrDMDmwMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmuPZKDm7zZebm.diag
[2026-02-07 00:16:03] -rw-r--r--. 1 boincer umatlas     21006 Feb  7 00:16 stderr.txt
[2026-02-07 00:16:03] HITS file was successfully produced:
[2026-02-07 00:16:04] -rw-------. 1 boincer umatlas 285049554 Feb  7 00:13 shared/HITS.pool.root.1
[2026-02-07 00:16:04]  *** Contents of shared directory: ***
[2026-02-07 00:16:04] total 938864
[2026-02-07 00:16:04] -rw-r--r--. 2 boincer umatlas 672707469 Feb  6 19:09 ATLAS.root_0
[2026-02-07 00:16:04] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 19:09 start_atlas.sh
[2026-02-07 00:16:04] -rw-r--r--. 2 boincer umatlas    597948 Feb  6 19:09 input.tar.gz
[2026-02-07 00:16:04] -rw-------. 1 boincer umatlas 285049554 Feb  7 00:13 HITS.pool.root.1
[2026-02-07 00:16:04] -rw-------. 1 boincer umatlas   3010560 Feb  7 00:16 result.tar.gz
00:16:05 (837542): run_atlas exited; CPU time 75865.898154
00:16:05 (837542): called boinc_finish(0)

</stderr_txt>
]]>

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