Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-09 08:12:09 (6644): vboxwrapper version 26210
2026-02-09 08:12:09 (6644): BOINC client version: 8.2.4
2026-02-09 08:12:09 (6644): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-09 08:12:09 (6644): Successfully copied 'init_data.xml' to the shared directory.
2026-02-09 08:12:10 (6644): Create VM. (boinc_7800db2e86567c96, slot#1)
2026-02-09 08:12:10 (6644): Setting Memory Size for VM. (4800MB)
2026-02-09 08:12:10 (6644): Setting CPU Count for VM. (8)
2026-02-09 08:12:11 (6644): Setting Chipset Options for VM.
2026-02-09 08:12:11 (6644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-09 08:12:11 (6644): Setting Boot Options for VM.
2026-02-09 08:12:12 (6644): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-09 08:12:12 (6644): Enabling VM Network Access.
2026-02-09 08:12:12 (6644): Disabling USB Support for VM.
2026-02-09 08:12:12 (6644): Disabling COM Port Support for VM.
2026-02-09 08:12:13 (6644): Disabling LPT Port Support for VM.
2026-02-09 08:12:13 (6644): Disabling Audio Support for VM.
2026-02-09 08:12:13 (6644): Disabling Clipboard Support for VM.
2026-02-09 08:12:13 (6644): Disabling Drag and Drop Support for VM.
2026-02-09 08:12:14 (6644): Adding storage controller(s) to VM.
2026-02-09 08:12:14 (6644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-09 08:12:16 (6644): Adding VirtualBox Guest Additions to VM.
2026-02-09 08:12:16 (6644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-09 08:12:16 (6644): forwarding host port 57827 to guest port 80
2026-02-09 08:12:17 (6644): Enabling remote desktop for VM.
2026-02-09 08:12:17 (6644): Enabling shared directory for VM.
2026-02-09 08:12:18 (6644): Starting VM using VBoxManage interface. (boinc_7800db2e86567c96, slot#1)
2026-02-09 08:12:25 (6644): Successfully started VM. (PID = '8384')
2026-02-09 08:12:25 (6644): Reporting VM Process ID to BOINC.
2026-02-09 08:12:25 (6644): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-09 08:12:25 (6644): Guest Log: CPUID EDX: 0x178bfbff
2026-02-09 08:12:25 (6644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-09 08:12:25 (6644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-09 08:12:25 (6644): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-09 08:12:25 (6644): Detected: Web Application Enabled (http://localhost:57827)
2026-02-09 08:12:25 (6644): Detected: Remote Desktop Enabled (localhost:57828)
2026-02-09 08:12:26 (6644): VM state change detected. (old = 'running', new = 'paused')
2026-02-09 08:12:30 (6644): Preference change detected
2026-02-09 08:12:30 (6644): Setting CPU throttle for VM. (100%)
2026-02-09 08:12:30 (6644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 08:12:31 (6644): VM state change detected. (old = 'paused', new = 'running')
2026-02-09 08:12:32 (6644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-09 08:12:32 (6644): Guest Log: BIOS: Booting from Hard Disk...
2026-02-09 08:12:35 (6644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-09 08:12:35 (6644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-09 08:12:35 (6644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-09 08:12:43 (6644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-09 08:12:43 (6644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-09 08:12:51 (6644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000172 main     Log opened 2026-02-09T08:12:44.105493000Z
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000324 main     OS Product: Linux
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000368 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000406 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000444 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000446 main     Process ID: 1370
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.000447 main     Package type: LINUX_64BITS_GENERIC
2026-02-09 08:12:51 (6644): Guest Log: 00:00:00.001738 main     5.2.32 r132073 started. Verbose level = 0
2026-02-09 08:12:51 (6644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-09 08:12:51 (6644): Guest Log: [INFO] Mounting shared directory
2026-02-09 08:12:51 (6644): Guest Log: [INFO] Checking for init_data.xml
2026-02-09 08:12:57 (6644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-09 08:12:57 (6644): Guest Log: [INFO] Detected branch: prod
2026-02-09 08:12:57 (6644): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-09 08:12:57 (6644): Guest Log: Copying input files
2026-02-09 08:13:01 (6644): Guest Log: 00:00:10.003837 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 816 715 005 000ns (GuestNow=1 770 653 580 823 554 000 ns GuestLast=1 770 624 764 108 549 000 ns fSetTimeLastLoop=true )
2026-02-09 08:13:02 (6644): Guest Log: Copied input files into RunAtlas.
2026-02-09 08:13:02 (6644): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-09 08:13:02 (6644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-09 08:13:02 (6644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-09 08:13:02 (6644): Guest Log: Further information can be found at the LHC@home message board.
2026-02-09 08:13:12 (6644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-09 08:13:12 (6644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-09 08:13:12 (6644): Guest Log: 2.6.3.0 1650 0 30148 156056 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-09 08:13:13 (6644): Guest Log: copied the webapp to /var/www
2026-02-09 08:13:13 (6644): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-09 08:13:13 (6644): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-09 08:13:13 (6644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-09 08:13:13 (6644): Guest Log:  *** Starting ATLAS job. (PandaID=7004058403 taskID=48431096) ***
2026-02-09 09:34:38 (6644): VM state change detected. (old = 'running', new = 'paused')
2026-02-09 09:34:58 (6644): VM state change detected. (old = 'paused', new = 'running')
2026-02-09 09:52:55 (6644): Status Report: Elapsed Time: '6000.000000'
2026-02-09 09:52:55 (6644): Status Report: CPU Time: '40196.750000'
2026-02-09 11:32:59 (6644): Status Report: Elapsed Time: '12000.000000'
2026-02-09 11:32:59 (6644): Status Report: CPU Time: '87285.734375'
2026-02-09 12:42:56 (6644): Guest Log:  *** Job finished ***
2026-02-09 12:42:56 (6644): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:12,191 | INFO     | [data] copytool_in thread has finished
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:13,619 | INFO     | [data] queue_monitor thread has finished
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:36,390 | INFO     | [monitor] cgroup control has ended
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:36,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396876461888)>', '<ExcThread(monitor, started 140396290103040)>']
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:36,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:36,912 | INFO     | [monitor] control thread has ended
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,860 | INFO     | all workflow threads have been joined
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,860 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,860 | INFO     | traces error code: 0
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,974 [wrapper] ==== pilot stdout END ====
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,979 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,984 [wrapper] pilotpid: 6085
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:41,989 [wrapper] Pilot exit status: 0
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,072 [wrapper] pandaids: 7004058403
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,112 [wrapper] cleanup supervisor_pilot 28987 6086
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,117 [wrapper] Test setup, not cleaning
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,125 [wrapper] apfmon messages muted
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,131 [wrapper] ==== wrapper stdout END ====
2026-02-09 12:42:56 (6644): Guest Log: 2026-02-09 20:42:42,136 [wrapper] ==== wrapper stderr END ====
2026-02-09 12:42:56 (6644): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 12:42:56 (6644): Guest Log:     "exeErrorCode": 0,
2026-02-09 12:42:56 (6644): Guest Log:     "exeErrorDiag": "",
2026-02-09 12:42:56 (6644): Guest Log:     "pilotErrorCode": 0,
2026-02-09 12:42:56 (6644): Guest Log:     "pilotErrorDiag": "",
2026-02-09 12:42:56 (6644): Guest Log:  *** Listing of results directory ***
2026-02-09 12:42:56 (6644): Guest Log: total 287796
2026-02-09 12:42:56 (6644): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 16:59 pilot3.tar.gz
2026-02-09 12:42:56 (6644): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 17:00 runpilot2-wrapper.sh
2026-02-09 12:42:56 (6644): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 17:00 queuedata.json
2026-02-09 12:42:56 (6644): Guest Log: -rwxr-xr-x. 1 atlas atlas      8759 Feb  9 16:13 init_data.xml
2026-02-09 12:42:56 (6644): Guest Log: -rwxr-xr-x. 1 atlas atlas    597953 Feb  9 16:13 input.tar.gz
2026-02-09 12:42:56 (6644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  9 16:13 start_atlas.sh
2026-02-09 12:42:56 (6644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 16:13 EVNT.48431094._000282.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 12:42:56 (6644): Guest Log: -rw-r--r--. 1 atlas atlas      2554 Feb  9 16:13 pandaJob.out
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas   1009480 Feb  9 16:14 agis_schedconf.cvmfs.json
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas       426 Feb  9 16:14 workernode_map.json
2026-02-09 12:42:56 (6644): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 16:14 pilot3
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas 285343306 Feb  9 20:40 HITS.48431096._006686.pool.root.1
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 20:41 pilot_heartbeat.json
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas      1034 Feb  9 20:41 memory_monitor_summary.json
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  9 20:42 agis_ddmendpoints.agis.ALL.json
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas    524722 Feb  9 20:42 log.48431096._006686.job.log.tgz.1
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas      6389 Feb  9 20:42 heartbeat.json
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas      4608 Feb  9 20:42 pilotlog.txt
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas   2217594 Feb  9 20:42 log.48431096._006686.job.log.1
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 20:42 output.list
2026-02-09 12:42:56 (6644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 20:42 runtime_log
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas   2764800 Feb  9 20:42 result.tar.gz
2026-02-09 12:42:56 (6644): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Feb  9 20:42 runtime_log.err
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas       662 Feb  9 20:42 ewsKDmvMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjOZKDm4zWSIn.diag
2026-02-09 12:42:56 (6644): Guest Log: Looking for outputfile HITS.48431096._006686.pool.root.1
2026-02-09 12:42:56 (6644): Guest Log: HITS file was successfully produced
2026-02-09 12:42:56 (6644): Guest Log: -rw-------. 1 atlas atlas 285343306 Feb  9 20:40 /home/atlas/RunAtlas/HITS.48431096._006686.pool.root.1
2026-02-09 12:42:58 (6644): Guest Log: Successfully finished the ATLAS job!
2026-02-09 12:42:58 (6644): Guest Log: Copying the results back to the shared directory!
2026-02-09 12:42:58 (6644): Guest Log:  *** Contents of shared directory: ***
2026-02-09 12:42:58 (6644): Guest Log: total 938756
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root 672550640 Feb  9 16:12 ATLAS.root_0
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root 285343306 Feb  9  2026 HITS.pool.root.1
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root      8759 Feb  9 16:12 init_data.xml
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root    597953 Feb  6 21:32 input.tar.gz
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root   2764800 Feb  9  2026 result.tar.gz
2026-02-09 12:42:58 (6644): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 21:32 start_atlas.sh
2026-02-09 12:42:58 (6644): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 12:42:59 (6644): VM Completion File Detected.
2026-02-09 12:42:59 (6644): Powering off VM.
2026-02-09 12:43:00 (6644): Successfully stopped VM.
2026-02-09 12:43:00 (6644): Deregistering VM. (boinc_7800db2e86567c96, slot#1)
2026-02-09 12:43:00 (6644): Removing network bandwidth throttle group from VM.
2026-02-09 12:43:01 (6644): Removing VM from VirtualBox.
2026-02-09 12:43:06 (6644): called boinc_finish(0)

</stderr_txt>
]]>

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