Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:46 (16883): wrapper (7.7.26015): starting
06:14:46 (16883): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 06:14:46] Arguments: --nthreads 8
[2026-02-07 06:14:46] Threads: 8
[2026-02-07 06:14:46] Checking for CVMFS
[2026-02-07 06:14:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:14:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:14:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:14:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:14:49] 2.11.2.0 6978 76724 132640 155972 2 93 24725112 25165825 1088 130560 0 25648917 99.820 17474613 3442 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-07 06:14:49] CVMFS is ok
[2026-02-07 06:14:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:14:49] Checking for apptainer binary...
[2026-02-07 06:14:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:14:49] Running /usr/bin/apptainer --version
[2026-02-07 06:14:49] apptainer version 1.3.2-1.el7
[2026-02-07 06:14:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:15:11] cg-vwn361.simple-grid.lan
[2026-02-07 06:15:11] apptainer works
[2026-02-07 06:15:11] Set ATHENA_PROC_NUMBER=8
[2026-02-07 06:15:11] Set ATHENA_CORE_NUMBER=8
[2026-02-07 06:15:11] Starting ATLAS job with PandaID=7004057998
[2026-02-07 06:15:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:18:20]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:18:20] 2026-02-07 10:17:37,037 | INFO     | log transfer has been attempted: DONE
[2026-02-07 11:18:20] 2026-02-07 10:17:37,037 | INFO     | job 7004057998 has finished - writing final server update
[2026-02-07 11:18:20] 2026-02-07 10:17:37,037 | INFO     | total number of processed events: 400 (read)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,040 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7004057998/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,040 | INFO     | extracted standard info from prmon json
[2026-02-07 11:18:20] 2026-02-07 10:17:37,040 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:18:20] 2026-02-07 10:17:37,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:18:20] 2026-02-07 10:17:37,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:18:20] 2026-02-07 10:17:37,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:18:20] 2026-02-07 10:17:37,047 | INFO     | fitting pss+swap vs Time
[2026-02-07 11:18:20] 2026-02-07 10:17:37,048 | INFO     | sum of square deviations: 7253894147.5
[2026-02-07 11:18:20] 2026-02-07 10:17:37,051 | INFO     | sum of deviations: 107583613006.99997
[2026-02-07 11:18:20] 2026-02-07 10:17:37,051 | INFO     | mean x: 1770450695.5
[2026-02-07 11:18:20] 2026-02-07 10:17:37,051 | INFO     | mean y: 2510320.6573426574
[2026-02-07 11:18:20] 2026-02-07 10:17:37,051 | INFO     | intersect: -26255314593.742672
[2026-02-07 11:18:20] 2026-02-07 10:17:37,052 | INFO     | chi2: 8.189909550280403
[2026-02-07 11:18:20] 2026-02-07 10:17:37,053 | INFO     | sum of square deviations: 6880054580.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,055 | INFO     | sum of deviations: 124813584130.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,056 | INFO     | mean x: 1770450543.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,056 | INFO     | mean y: 2517236.857651246
[2026-02-07 11:18:20] 2026-02-07 10:17:37,056 | INFO     | intersect: -32115872992.06619
[2026-02-07 11:18:20] 2026-02-07 10:17:37,056 | INFO     | chi2: 7.485458240415662
[2026-02-07 11:18:20] 2026-02-07 10:17:37,056 | INFO     | current chi2=7.485458240415662 (change=8.601454088593957 %)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,057 | INFO     | right removable region: 280
[2026-02-07 11:18:20] 2026-02-07 10:17:37,057 | INFO     | sum of square deviations: 6880054580.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,060 | INFO     | sum of deviations: 4872346025.000004
[2026-02-07 11:18:20] 2026-02-07 10:17:37,060 | INFO     | mean x: 1770450848.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,060 | INFO     | mean y: 2552196.5231316728
[2026-02-07 11:18:20] 2026-02-07 10:17:37,061 | INFO     | intersect: -1251253140.5430586
[2026-02-07 11:18:20] 2026-02-07 10:17:37,061 | INFO     | chi2: 3.2327084822607026
[2026-02-07 11:18:20] 2026-02-07 10:17:37,061 | INFO     | current chi2=3.2327084822607026 (change=60.52815403620638 %)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,062 | INFO     | sum of square deviations: 6519285025.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,064 | INFO     | sum of deviations: -61668898641.500015
[2026-02-07 11:18:20] 2026-02-07 10:17:37,065 | INFO     | mean x: 1770451000.5
[2026-02-07 11:18:20] 2026-02-07 10:17:37,065 | INFO     | mean y: 2580237.547101449
[2026-02-07 11:18:20] 2026-02-07 10:17:37,065 | INFO     | intersect: 16750085965.688938
[2026-02-07 11:18:20] 2026-02-07 10:17:37,066 | INFO     | chi2: 1.061612971231553
[2026-02-07 11:18:20] 2026-02-07 10:17:37,066 | INFO     | current chi2=1.061612971231553 (change=67.16026276241452 %)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,066 | INFO     | sum of square deviations: 6171352920.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,069 | INFO     | sum of deviations: -69068729311.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,069 | INFO     | mean x: 1770451153.0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,069 | INFO     | mean y: 2583448.557195572
[2026-02-07 11:18:20] 2026-02-07 10:17:37,069 | INFO     | intersect: 19817170789.464745
[2026-02-07 11:18:20] 2026-02-07 10:17:37,070 | INFO     | chi2: 0.9938760500962378
[2026-02-07 11:18:20] 2026-02-07 10:17:37,070 | INFO     | current chi2=0.9938760500962378 (change=6.380566456034829 %)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,070 | INFO     | left removable region: 30
[2026-02-07 11:18:20] 2026-02-07 10:17:37,071 | INFO     | sum of square deviations: 4844974562.5
[2026-02-07 11:18:20] 2026-02-07 10:17:37,073 | INFO     | sum of deviations: -27676293896.000004
[2026-02-07 11:18:20] 2026-02-07 10:17:37,073 | INFO     | mean x: 1770451427.5
[2026-02-07 11:18:20] 2026-02-07 10:17:37,074 | INFO     | mean y: 2581312.416
[2026-02-07 11:18:20] 2026-02-07 10:17:37,074 | INFO     | intersect: 10116057328.438478
[2026-02-07 11:18:20] 2026-02-07 10:17:37,074 | INFO     | chi2: 0.17130831235343932
[2026-02-07 11:18:20] 2026-02-07 10:17:37,074 | INFO     | current memory leak: -5.71 B/s (using 250 data points, chi2=0.17)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,075 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,075 | INFO     | ..............................
[2026-02-07 11:18:20] 2026-02-07 10:17:37,075 | INFO     | . Timing measurements:
[2026-02-07 11:18:20] 2026-02-07 10:17:37,075 | INFO     | . get job = 0 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . initial setup = 119 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . payload setup = 151 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . stage-in = 0 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . payload execution = 17578 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . stage-out = 3 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | . log creation = 1 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,076 | INFO     | ..............................
[2026-02-07 11:18:20] 2026-02-07 10:17:37,278 | INFO     | 
[2026-02-07 11:18:20] 2026-02-07 10:17:37,278 | INFO     | job summary report
[2026-02-07 11:18:20] 2026-02-07 10:17:37,278 | INFO     | --------------------------------------------------
[2026-02-07 11:18:20] 2026-02-07 10:17:37,278 | INFO     | PanDA job id: 7004057998
[2026-02-07 11:18:20] 2026-02-07 10:17:37,278 | INFO     | task id: 48431096
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | errors: (none)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | pilot state: finished 
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | transexitcode: 0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | exeerrorcode: 0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | exeerrordiag: 
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | exitcode: 0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | exitmsg: OK
[2026-02-07 11:18:20] 2026-02-07 10:17:37,279 | INFO     | cpuconsumptiontime: 85604 s
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | nevents: 400
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | neventsw: 0
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | pid: 25342
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | pgrp: 25342
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | corecount: 8
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | event service: False
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | sizes: {0: 2281988, 1: 2283046, 2: 2283106, 12: 2283134, 17735: 2315311, 17739: 2324309, 17741: 2324493, 17744: 2324687}
[2026-02-07 11:18:20] 2026-02-07 10:17:37,280 | INFO     | --------------------------------------------------
[2026-02-07 11:18:20] 2026-02-07 10:17:37,281 | INFO     | 
[2026-02-07 11:18:20] 2026-02-07 10:17:37,281 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-07 11:18:20] 2026-02-07 10:17:37,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:18:20] 2026-02-07 10:17:37,399 | INFO     | job 7004057998 has completed (purged errors)
[2026-02-07 11:18:20] 2026-02-07 10:17:37,400 | INFO     | overall cleanup function is called
[2026-02-07 11:18:20] 2026-02-07 10:17:38,408 | INFO     | --- collectZombieJob: --- 10, [25342]
[2026-02-07 11:18:20] 2026-02-07 10:17:38,408 | INFO     | zombie collector waiting for pid 25342
[2026-02-07 11:18:20] 2026-02-07 10:17:38,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:18:20] 2026-02-07 10:17:38,408 | INFO     | collected zombie processes
[2026-02-07 11:18:20] 2026-02-07 10:17:38,408 | INFO     | will attempt to kill all subprocesses of pid=25342
[2026-02-07 11:18:20] 2026-02-07 10:17:38,501 | INFO     | process IDs to be killed: [25342] (in reverse order)
[2026-02-07 11:18:20] 2026-02-07 10:17:39,403 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:18:20] 2026-02-07 10:17:39,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:18:20] 2026-02-07 10:17:39,406 | INFO     | did not find any defunct processes belonging to 25342
[2026-02-07 11:18:20] 2026-02-07 10:17:39,408 | INFO     | did not find any defunct processes belonging to 25342
[2026-02-07 11:18:20] 2026-02-07 10:17:39,408 | INFO     | ready for new job
[2026-02-07 11:18:20] 2026-02-07 10:17:39,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:18:20] 2026-02-07 10:17:39,411 | INFO     | **************************************
[2026-02-07 11:18:20] 2026-02-07 10:17:39,411 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 11:18:20] 2026-02-07 10:17:39,411 | INFO     | **************************************
[2026-02-07 11:18:20] 2026-02-07 10:17:39,411 | INFO     | 
[2026-02-07 11:18:20] 2026-02-07 10:17:39,412 | INFO     | pilot is running in a VM
[2026-02-07 11:18:20] 2026-02-07 10:17:39,412 | INFO     | architecture information:
[2026-02-07 11:18:20] 2026-02-07 10:17:39,415 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:18:20] 2026-02-07 10:17:39,655 | INFO     | cat /etc/os-release:
[2026-02-07 11:18:20] NAME="CentOS Linux"
[2026-02-07 11:18:20] VERSION="7 (Core)"
[2026-02-07 11:18:20] ID="centos"
[2026-02-07 11:18:20] ID_LIKE="rhel fedora"
[2026-02-07 11:18:20] VERSION_ID="7"
[2026-02-07 11:18:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:18:20] ANSI_COLOR="0;31"
[2026-02-07 11:18:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:18:20] HOME_URL="https://www.centos.org/"
[2026-02-07 11:18:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:18:20] 
[2026-02-07 11:18:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:18:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:18:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:18:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:18:20] 
[2026-02-07 11:18:20] 2026-02-07 10:17:39,656 | INFO     | **************************************
[2026-02-07 11:18:20] 2026-02-07 10:17:40,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-07 11:18:20] 2026-02-07 10:17:40,455 | INFO     | sufficient remaining disk space (495572746240 B)
[2026-02-07 11:18:20] 2026-02-07 10:17:40,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:18:20] 2026-02-07 10:17:40,456 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:18:20] 2026-02-07 10:17:40,456 | INFO     | update_server=False
[2026-02-07 11:18:20] 2026-02-07 10:17:40,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:18:20] 2026-02-07 10:17:40,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:18:20] 2026-02-07 10:17:40,457 | INFO     | aborting loop
[2026-02-07 11:18:20] 2026-02-07 10:17:40,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:18:20] 2026-02-07 10:17:40,709 | INFO     | all job control threads have been joined
[2026-02-07 11:18:20] 2026-02-07 10:17:40,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:18:20] 2026-02-07 10:17:41,034 | INFO     | all payload control threads have been joined
[2026-02-07 11:18:20] 2026-02-07 10:17:41,462 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:41,463 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:41,493 | INFO     | all data control threads have been joined
[2026-02-07 11:18:20] 2026-02-07 10:17:41,699 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:41,715 | INFO     | [job] control thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:41,847 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,040 | INFO     | [payload] control thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,106 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,241 | INFO     | [job] validate thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,256 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:18:20] 2026-02-07 10:17:42,464 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,499 | INFO     | [data] control thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,612 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,777 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:42,806 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:43,294 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:17:45,006 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:18:20] 2026-02-07 10:18:09,506 | INFO     | PID=20872 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 11:18:20] 2026-02-07 10:18:09,506 | INFO     | .. there are 2 such processes running
[2026-02-07 11:18:20] 2026-02-07 10:18:09,506 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:18:20] 2026-02-07 10:18:09,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:18:20] 2026-02-07 10:18:09,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:18:20] 2026-02-07 10:18:10,377 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:18:20] 2026-02-07 10:18:10,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779936790336)>', '<ExcThread(monitor, started 139779333138176)>']
[2026-02-07 11:18:20] 2026-02-07 10:18:11,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:18:20] 2026-02-07 10:18:11,523 | INFO     | [monitor] control thread has ended
[2026-02-07 11:18:20] 2026-02-07 10:18:15,558 | INFO     | all workflow threads have been joined
[2026-02-07 11:18:20] 2026-02-07 10:18:15,558 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:18:20] 2026-02-07 10:18:15,559 | INFO     | traces error code: 0
[2026-02-07 11:18:20] 2026-02-07 10:18:15,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:18:20] 2026-02-07 10:18:16,022 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:18:20] 2026-02-07 10:18:16,086 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:18:20] 2026-02-07 10:18:16,144 [wrapper] pilotpid: 20872
[2026-02-07 11:18:20] 2026-02-07 10:18:16,232 [wrapper] Pilot exit status: 0
[2026-02-07 11:18:20] 2026-02-07 10:18:16,712 [wrapper] pandaids: 7004057998
[2026-02-07 11:18:20] 2026-02-07 10:18:17,687 [wrapper] cleanup supervisor_pilot 15845 20873
[2026-02-07 11:18:20] 2026-02-07 10:18:17,772 [wrapper] Test setup, not cleaning
[2026-02-07 11:18:20] 2026-02-07 10:18:17,822 [wrapper] apfmon messages muted
[2026-02-07 11:18:20] 2026-02-07 10:18:17,905 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:18:20] 2026-02-07 10:18:17,985 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:18:20]  *** Error codes and diagnostics ***
[2026-02-07 11:18:20]     "exeErrorCode": 0,
[2026-02-07 11:18:20]     "exeErrorDiag": "",
[2026-02-07 11:18:20]     "pilotErrorCode": 0,
[2026-02-07 11:18:20]     "pilotErrorDiag": "",
[2026-02-07 11:18:20]  *** Listing of results directory ***
[2026-02-07 11:18:20] total 945920
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-07 11:18:20] -rwx------. 1 boinc boinc     36322 Feb  6 18:00 runpilot2-wrapper.sh
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc      5111 Feb  6 18:00 queuedata.json
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc       100 Feb  7 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:18:20] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 06:14 run_atlas
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc       105 Feb  7 06:14 job.xml
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc      6390 Feb  7 06:14 init_data.xml
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc 679913128 Feb  7 06:14 EVNT.48431094._000279.pool.root.1
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc     15845 Feb  7 06:14 start_atlas.sh
[2026-02-07 11:18:20] drwxrwx--x. 2 boinc boinc        68 Feb  7 06:14 shared
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc    597956 Feb  7 06:14 input.tar.gz
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc         0 Feb  7 06:14 boinc_lockfile
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc      2552 Feb  7 06:15 pandaJob.out
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc       415 Feb  7 06:21 workernode_map.json
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc   1009512 Feb  7 06:21 agis_schedconf.cvmfs.json
[2026-02-07 11:18:20] drwx------. 5 boinc boinc      4096 Feb  7 06:21 pilot3
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc 278808283 Feb  7 11:16 HITS.48431096._006492.pool.root.1
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc       532 Feb  7 11:16 boinc_task_state.xml
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc        95 Feb  7 11:17 pilot_heartbeat.json
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc      1021 Feb  7 11:17 memory_monitor_summary.json
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc   1513088 Feb  7 11:17 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc    496023 Feb  7 11:17 log.48431096._006492.job.log.tgz.1
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc      6321 Feb  7 11:17 heartbeat.json
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc        28 Feb  7 11:18 wrapper_checkpoint.txt
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc      4880 Feb  7 11:18 pilotlog.txt
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc   2490805 Feb  7 11:18 log.48431096._006492.job.log.1
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc       357 Feb  7 11:18 output.list
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc       620 Feb  7 11:18 runtime_log
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc   3000320 Feb  7 11:18 result.tar.gz
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc       656 Feb  7 11:18 XRUNDmgMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1NZKDmd1llFn.diag
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc      8816 Feb  7 11:18 runtime_log.err
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc      8192 Feb  7 11:18 boinc_mmap_file
[2026-02-07 11:18:20] -rw-r--r--. 1 boinc boinc     20642 Feb  7 11:18 stderr.txt
[2026-02-07 11:18:20] HITS file was successfully produced:
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc 278808283 Feb  7 11:16 shared/HITS.pool.root.1
[2026-02-07 11:18:20]  *** Contents of shared directory: ***
[2026-02-07 11:18:20] total 939788
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc 679913128 Feb  7 06:14 ATLAS.root_0
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc     15845 Feb  7 06:14 start_atlas.sh
[2026-02-07 11:18:20] -rw-r--r--. 2 boinc boinc    597956 Feb  7 06:14 input.tar.gz
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc 278808283 Feb  7 11:16 HITS.pool.root.1
[2026-02-07 11:18:20] -rw-------. 1 boinc boinc   3000320 Feb  7 11:18 result.tar.gz
11:18:22 (16883): run_atlas exited; CPU time 85813.405423
11:18:22 (16883): called boinc_finish(0)

</stderr_txt>
]]>

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