Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:05:33 (23953): wrapper (7.7.26015): starting
07:05:33 (23953): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 07:05:33] Arguments: --nthreads 8
[2026-02-07 07:05:33] Threads: 8
[2026-02-07 07:05:33] Checking for CVMFS
[2026-02-07 07:05:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 07:05:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 07:05:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 07:05:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 07:05:36] 2.11.2.0 13854 76791 110140 155973 1 202 17763796 25165825 3992 130560 0 35594041 99.805 27109077 2611 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-07 07:05:36] CVMFS is ok
[2026-02-07 07:05:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 07:05:36] Checking for apptainer binary...
[2026-02-07 07:05:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 07:05:36] Running /usr/bin/apptainer --version
[2026-02-07 07:05:36] apptainer version 1.3.2-1.el7
[2026-02-07 07:05:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 07:05:37] cg-vwn417.simple-grid.lan
[2026-02-07 07:05:37] apptainer works
[2026-02-07 07:05:37] Set ATHENA_PROC_NUMBER=8
[2026-02-07 07:05:37] Set ATHENA_CORE_NUMBER=8
[2026-02-07 07:05:37] Starting ATLAS job with PandaID=7004223967
[2026-02-07 07:05:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:25:51]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:25:51] 2026-02-07 10:25:14,377 | INFO     | total number of processed events: 400 (read)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,379 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7004223967/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,379 | INFO     | extracted standard info from prmon json
[2026-02-07 11:25:51] 2026-02-07 10:25:14,380 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:25:51] 2026-02-07 10:25:14,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:25:51] 2026-02-07 10:25:14,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:25:51] 2026-02-07 10:25:14,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:25:51] 2026-02-07 10:25:14,386 | INFO     | fitting pss+swap vs Time
[2026-02-07 11:25:51] 2026-02-07 10:25:14,387 | INFO     | sum of square deviations: 5141528960.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,389 | INFO     | sum of deviations: 37918060062.00001
[2026-02-07 11:25:51] 2026-02-07 10:25:14,390 | INFO     | mean x: 1770452140.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,390 | INFO     | mean y: 2466554.925490196
[2026-02-07 11:25:51] 2026-02-07 10:25:14,390 | INFO     | intersect: -13054371421.421618
[2026-02-07 11:25:51] 2026-02-07 10:25:14,390 | INFO     | chi2: 2.327557880812008
[2026-02-07 11:25:51] 2026-02-07 10:25:14,391 | INFO     | sum of square deviations: 4844974562.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,397 | INFO     | sum of deviations: 53657507927.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,402 | INFO     | mean x: 1770451987.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,402 | INFO     | mean y: 2474510.66
[2026-02-07 11:25:51] 2026-02-07 10:25:14,402 | INFO     | intersect: -19605067351.33907
[2026-02-07 11:25:51] 2026-02-07 10:25:14,403 | INFO     | chi2: 1.5550898254624435
[2026-02-07 11:25:51] 2026-02-07 10:25:14,403 | INFO     | current chi2=1.5550898254624435 (change=33.18792033992624 %)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,404 | INFO     | sum of square deviations: 4560048290.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,406 | INFO     | sum of deviations: 52305856538.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,406 | INFO     | mean x: 1770451835.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,406 | INFO     | mean y: 2473787.702040816
[2026-02-07 11:25:51] 2026-02-07 10:25:14,406 | INFO     | intersect: -20305425120.304665
[2026-02-07 11:25:51] 2026-02-07 10:25:14,407 | INFO     | chi2: 1.5554352066498551
[2026-02-07 11:25:51] 2026-02-07 10:25:14,407 | INFO     | current chi2=1.5554352066498551 (change=-0.022209725879273102 %)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,407 | INFO     | right removable region: 244
[2026-02-07 11:25:51] 2026-02-07 10:25:14,408 | INFO     | sum of square deviations: 4844974562.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,410 | INFO     | sum of deviations: -3908830834.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,411 | INFO     | mean x: 1770452292.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,411 | INFO     | mean y: 2487890.888
[2026-02-07 11:25:51] 2026-02-07 10:25:14,411 | INFO     | intersect: 1430854215.989833
[2026-02-07 11:25:51] 2026-02-07 10:25:14,411 | INFO     | chi2: 0.8082176678703308
[2026-02-07 11:25:51] 2026-02-07 10:25:14,411 | INFO     | current chi2=0.8082176678703308 (change=65.27615168958245 %)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,412 | INFO     | sum of square deviations: 4560048290.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,414 | INFO     | sum of deviations: -2488462365.000002
[2026-02-07 11:25:51] 2026-02-07 10:25:14,414 | INFO     | mean x: 1770452445.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,415 | INFO     | mean y: 2487121.6
[2026-02-07 11:25:51] 2026-02-07 10:25:14,415 | INFO     | intersect: 968640109.07302
[2026-02-07 11:25:51] 2026-02-07 10:25:14,415 | INFO     | chi2: 0.7920299967425403
[2026-02-07 11:25:51] 2026-02-07 10:25:14,415 | INFO     | current chi2=0.7920299967425403 (change=2.002885085455425 %)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,415 | INFO     | left removable region: 20
[2026-02-07 11:25:51] 2026-02-07 10:25:14,416 | INFO     | sum of square deviations: 3485088600.0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,418 | INFO     | sum of deviations: 9271350502.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,418 | INFO     | mean x: 1770452414.5
[2026-02-07 11:25:51] 2026-02-07 10:25:14,418 | INFO     | mean y: 2497648.4866071427
[2026-02-07 11:25:51] 2026-02-07 10:25:14,418 | INFO     | intersect: -4707421313.925686
[2026-02-07 11:25:51] 2026-02-07 10:25:14,419 | INFO     | chi2: 0.0008526420668140004
[2026-02-07 11:25:51] 2026-02-07 10:25:14,419 | INFO     | current memory leak: 2.66 B/s (using 224 data points, chi2=0.00)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | ..............................
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . Timing measurements:
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . get job = 0 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . initial setup = 8 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . payload setup = 10 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . stage-in = 0 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,420 | INFO     | . payload execution = 15525 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,421 | INFO     | . stage-out = 3 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,421 | INFO     | . log creation = 1 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,421 | INFO     | ..............................
[2026-02-07 11:25:51] 2026-02-07 10:25:14,585 | INFO     | 
[2026-02-07 11:25:51] 2026-02-07 10:25:14,585 | INFO     | job summary report
[2026-02-07 11:25:51] 2026-02-07 10:25:14,585 | INFO     | --------------------------------------------------
[2026-02-07 11:25:51] 2026-02-07 10:25:14,585 | INFO     | PanDA job id: 7004223967
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | task id: 48317892
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | errors: (none)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | pilot state: finished 
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | transexitcode: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | exeerrorcode: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | exeerrordiag: 
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | exitcode: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,586 | INFO     | exitmsg: OK
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | cpuconsumptiontime: 60885 s
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | nevents: 400
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | neventsw: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | pid: 32391
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | pgrp: 32391
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | corecount: 8
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | event service: False
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | sizes: {0: 2282552, 1: 2283069, 2: 2283069, 15540: 2314296, 15543: 2323294, 15545: 2323350, 15546: 2323672}
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | --------------------------------------------------
[2026-02-07 11:25:51] 2026-02-07 10:25:14,587 | INFO     | 
[2026-02-07 11:25:51] 2026-02-07 10:25:14,588 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-07 11:25:51] 2026-02-07 10:25:14,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:25:51] 2026-02-07 10:25:14,891 | INFO     | job 7004223967 has completed (purged errors)
[2026-02-07 11:25:51] 2026-02-07 10:25:14,891 | INFO     | overall cleanup function is called
[2026-02-07 11:25:51] 2026-02-07 10:25:15,900 | INFO     | --- collectZombieJob: --- 10, [32391]
[2026-02-07 11:25:51] 2026-02-07 10:25:15,900 | INFO     | zombie collector waiting for pid 32391
[2026-02-07 11:25:51] 2026-02-07 10:25:15,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:25:51] 2026-02-07 10:25:15,900 | INFO     | collected zombie processes
[2026-02-07 11:25:51] 2026-02-07 10:25:15,900 | INFO     | will attempt to kill all subprocesses of pid=32391
[2026-02-07 11:25:51] 2026-02-07 10:25:16,052 | INFO     | process IDs to be killed: [32391] (in reverse order)
[2026-02-07 11:25:51] 2026-02-07 10:25:16,874 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:25:51] 2026-02-07 10:25:16,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:25:51] 2026-02-07 10:25:16,878 | INFO     | did not find any defunct processes belonging to 32391
[2026-02-07 11:25:51] 2026-02-07 10:25:16,881 | INFO     | did not find any defunct processes belonging to 32391
[2026-02-07 11:25:51] 2026-02-07 10:25:16,881 | INFO     | ready for new job
[2026-02-07 11:25:51] 2026-02-07 10:25:16,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:25:51] 2026-02-07 10:25:16,884 | INFO     | **************************************
[2026-02-07 11:25:51] 2026-02-07 10:25:16,884 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 11:25:51] 2026-02-07 10:25:16,884 | INFO     | **************************************
[2026-02-07 11:25:51] 2026-02-07 10:25:16,884 | INFO     | 
[2026-02-07 11:25:51] 2026-02-07 10:25:16,892 | INFO     | pilot is running in a VM
[2026-02-07 11:25:51] 2026-02-07 10:25:16,892 | INFO     | architecture information:
[2026-02-07 11:25:51] 2026-02-07 10:25:16,903 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:25:51] 2026-02-07 10:25:17,148 | INFO     | cat /etc/os-release:
[2026-02-07 11:25:51] NAME="CentOS Linux"
[2026-02-07 11:25:51] VERSION="7 (Core)"
[2026-02-07 11:25:51] ID="centos"
[2026-02-07 11:25:51] ID_LIKE="rhel fedora"
[2026-02-07 11:25:51] VERSION_ID="7"
[2026-02-07 11:25:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:25:51] ANSI_COLOR="0;31"
[2026-02-07 11:25:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:25:51] HOME_URL="https://www.centos.org/"
[2026-02-07 11:25:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:25:51] 
[2026-02-07 11:25:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:25:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:25:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:25:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:25:51] 
[2026-02-07 11:25:51] 2026-02-07 10:25:17,148 | INFO     | **************************************
[2026-02-07 11:25:51] 2026-02-07 10:25:17,652 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-07 11:25:51] 2026-02-07 10:25:17,844 | INFO     | sufficient remaining disk space (494861811712 B)
[2026-02-07 11:25:51] 2026-02-07 10:25:17,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:25:51] 2026-02-07 10:25:17,844 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:25:51] 2026-02-07 10:25:17,844 | INFO     | update_server=False
[2026-02-07 11:25:51] 2026-02-07 10:25:17,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:25:51] 2026-02-07 10:25:17,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:25:51] 2026-02-07 10:25:18,310 | INFO     | all data control threads have been joined
[2026-02-07 11:25:51] 2026-02-07 10:25:18,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:25:51] 2026-02-07 10:25:18,398 | INFO     | aborting loop
[2026-02-07 11:25:51] 2026-02-07 10:25:18,767 | INFO     | all payload control threads have been joined
[2026-02-07 11:25:51] 2026-02-07 10:25:18,839 | INFO     | all job control threads have been joined
[2026-02-07 11:25:51] 2026-02-07 10:25:18,851 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:18,949 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,264 | INFO     | [job] validate thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,317 | INFO     | [data] control thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,404 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,446 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,474 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:25:51] 2026-02-07 10:25:19,703 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,773 | INFO     | [payload] control thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,844 | INFO     | [job] control thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,852 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:19,856 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:20,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:25:51] 2026-02-07 10:25:20,327 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:20,606 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:24,067 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:28,601 | INFO     | job.realtimelogging is not enabled
[2026-02-07 11:25:51] 2026-02-07 10:25:29,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:25:51] 2026-02-07 10:25:33,344 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:25:51] 2026-02-07 10:25:34,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222573061952)>', '<ExcThread(monitor, started 140221689624320)>']
[2026-02-07 11:25:51] 2026-02-07 10:25:39,735 | INFO     | all workflow threads have been joined
[2026-02-07 11:25:51] 2026-02-07 10:25:39,735 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:25:51] 2026-02-07 10:25:39,735 | INFO     | traces error code: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:39,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:25:51] 2026-02-07 10:25:46,961 | INFO     | PID=27937 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 11:25:51] 2026-02-07 10:25:46,962 | INFO     | .. there are 9 such processes running
[2026-02-07 11:25:51] 2026-02-07 10:25:46,962 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:25:51] 2026-02-07 10:25:46,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:25:51] 2026-02-07 10:25:46,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:25:51] 2026-02-07 10:25:46,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:25:51] 2026-02-07 10:25:46,963 | CRITICAL | thread 'MainThread' is not alive
[2026-02-07 11:25:51] 2026-02-07 10:25:46,963 | INFO     | [monitor] control thread has ended
[2026-02-07 11:25:51] 2026-02-07 10:25:47,377 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:25:51] 2026-02-07 10:25:47,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:25:51] 2026-02-07 10:25:47,477 [wrapper] pilotpid: 27937
[2026-02-07 11:25:51] 2026-02-07 10:25:47,548 [wrapper] Pilot exit status: 0
[2026-02-07 11:25:51] 2026-02-07 10:25:48,002 [wrapper] pandaids: 7004223967
[2026-02-07 11:25:51] 2026-02-07 10:25:48,786 [wrapper] cleanup supervisor_pilot 23387 27938
[2026-02-07 11:25:51] 2026-02-07 10:25:48,879 [wrapper] Test setup, not cleaning
[2026-02-07 11:25:51] 2026-02-07 10:25:49,001 [wrapper] apfmon messages muted
[2026-02-07 11:25:51] 2026-02-07 10:25:49,088 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:25:51] 2026-02-07 10:25:49,177 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:25:51]  *** Error codes and diagnostics ***
[2026-02-07 11:25:51]     "exeErrorCode": 0,
[2026-02-07 11:25:51]     "exeErrorDiag": "",
[2026-02-07 11:25:51]     "pilotErrorCode": 0,
[2026-02-07 11:25:51]     "pilotErrorDiag": "",
[2026-02-07 11:25:51]  *** Listing of results directory ***
[2026-02-07 11:25:51] total 665216
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc      5111 Feb  6 17:59 queuedata.json
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-07 11:25:51] -rwx------. 1 boinc boinc     36322 Feb  6 17:59 runpilot2-wrapper.sh
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc       100 Feb  7 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:25:51] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 07:05 run_atlas
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc       105 Feb  7 07:05 job.xml
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc 490330582 Feb  7 07:05 EVNT.48317889._000281.pool.root.1
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc     15845 Feb  7 07:05 start_atlas.sh
[2026-02-07 11:25:51] drwxrwx--x. 2 boinc boinc        68 Feb  7 07:05 shared
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc    597939 Feb  7 07:05 input.tar.gz
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc      6390 Feb  7 07:05 init_data.xml
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc         0 Feb  7 07:05 boinc_lockfile
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc      2523 Feb  7 07:05 pandaJob.out
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc   1009512 Feb  7 07:05 agis_schedconf.cvmfs.json
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc       415 Feb  7 07:06 workernode_map.json
[2026-02-07 11:25:51] drwx------. 5 boinc boinc      4096 Feb  7 07:06 pilot3
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc 181558267 Feb  7 11:23 HITS.48317892._014928.pool.root.1
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc       531 Feb  7 11:23 boinc_task_state.xml
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc      1016 Feb  7 11:25 memory_monitor_summary.json
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc   1513088 Feb  7 11:25 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc    521245 Feb  7 11:25 log.48317892._014928.job.log.tgz.1
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc      6321 Feb  7 11:25 heartbeat.json
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc      8192 Feb  7 11:25 boinc_mmap_file
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc        28 Feb  7 11:25 wrapper_checkpoint.txt
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc        95 Feb  7 11:25 pilot_heartbeat.json
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc       890 Feb  7 11:25 pilotlog.txt
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc   2162721 Feb  7 11:25 log.48317892._014928.job.log.1
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc       357 Feb  7 11:25 output.list
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc       620 Feb  7 11:25 runtime_log
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc   2703360 Feb  7 11:25 result.tar.gz
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc      8816 Feb  7 11:25 runtime_log.err
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc       655 Feb  7 11:25 pnLMDmwLe88n9Rq4apOajLDm4fhM0noT9bVooX4SDmyuYKDmDdg75m.diag
[2026-02-07 11:25:51] -rw-r--r--. 1 boinc boinc     20634 Feb  7 11:25 stderr.txt
[2026-02-07 11:25:51] HITS file was successfully produced:
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc 181558267 Feb  7 11:23 shared/HITS.pool.root.1
[2026-02-07 11:25:51]  *** Contents of shared directory: ***
[2026-02-07 11:25:51] total 659384
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc 490330582 Feb  7 07:05 ATLAS.root_0
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc     15845 Feb  7 07:05 start_atlas.sh
[2026-02-07 11:25:51] -rw-r--r--. 2 boinc boinc    597939 Feb  7 07:05 input.tar.gz
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc 181558267 Feb  7 11:23 HITS.pool.root.1
[2026-02-07 11:25:51] -rw-------. 1 boinc boinc   2703360 Feb  7 11:25 result.tar.gz
11:25:53 (23953): run_atlas exited; CPU time 61121.496924
11:25:53 (23953): called boinc_finish(0)

</stderr_txt>
]]>

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