Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-07 03:58:27 (7644): vboxwrapper version 26210
2026-02-07 03:58:27 (7644): BOINC client version: 8.2.8
2026-02-07 03:58:28 (7644): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-07 03:58:29 (7644): Successfully copied 'init_data.xml' to the shared directory.
2026-02-07 03:58:29 (7644): Create VM. (boinc_96079c07d19691af, slot#0)
2026-02-07 03:58:30 (7644): Setting Memory Size for VM. (4800MB)
2026-02-07 03:58:30 (7644): Setting CPU Count for VM. (8)
2026-02-07 03:58:30 (7644): Setting Chipset Options for VM.
2026-02-07 03:58:30 (7644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-07 03:58:31 (7644): Setting Boot Options for VM.
2026-02-07 03:58:31 (7644): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-07 03:58:32 (7644): Enabling VM Network Access.
2026-02-07 03:58:32 (7644): Disabling USB Support for VM.
2026-02-07 03:58:32 (7644): Disabling COM Port Support for VM.
2026-02-07 03:58:33 (7644): Disabling LPT Port Support for VM.
2026-02-07 03:58:33 (7644): Disabling Audio Support for VM.
2026-02-07 03:58:33 (7644): Disabling Clipboard Support for VM.
2026-02-07 03:58:33 (7644): Disabling Drag and Drop Support for VM.
2026-02-07 03:58:34 (7644): Adding storage controller(s) to VM.
2026-02-07 03:58:34 (7644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-07 03:58:36 (7644): Adding VirtualBox Guest Additions to VM.
2026-02-07 03:58:37 (7644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-07 03:58:37 (7644): forwarding host port 53110 to guest port 80
2026-02-07 03:58:37 (7644): Enabling remote desktop for VM.
2026-02-07 03:58:38 (7644): Required extension pack not installed, remote desktop not enabled.
2026-02-07 03:58:38 (7644): Enabling shared directory for VM.
2026-02-07 03:58:38 (7644): Starting VM using VBoxManage interface. (boinc_96079c07d19691af, slot#0)
2026-02-07 03:58:46 (7644): Successfully started VM. (PID = '3996')
2026-02-07 03:58:46 (7644): Reporting VM Process ID to BOINC.
2026-02-07 03:58:46 (7644): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-07 03:58:46 (7644): Guest Log: CPUID EDX: 0x178bfbff
2026-02-07 03:58:46 (7644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-07 03:58:46 (7644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-07 03:58:46 (7644): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-07 03:58:46 (7644): Detected: Web Application Enabled (http://localhost:53110)
2026-02-07 03:58:46 (7644): Preference change detected
2026-02-07 03:58:46 (7644): Setting CPU throttle for VM. (100%)
2026-02-07 03:58:46 (7644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-07 03:58:48 (7644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-07 03:58:48 (7644): Guest Log: BIOS: Booting from Hard Disk...
2026-02-07 03:58:51 (7644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-07 03:58:51 (7644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-07 03:58:51 (7644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-07 03:58:58 (7644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-07 03:58:58 (7644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-07 03:59:21 (7644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000391 main     Log opened 2026-02-07T03:59:18.143102000Z
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000620 main     OS Product: Linux
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000700 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000790 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000860 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000863 main     Process ID: 1396
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.000865 main     Package type: LINUX_64BITS_GENERIC
2026-02-07 03:59:21 (7644): Guest Log: 00:00:00.003481 main     5.2.32 r132073 started. Verbose level = 0
2026-02-07 03:59:21 (7644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-07 03:59:21 (7644): Guest Log: [INFO] Mounting shared directory
2026-02-07 03:59:21 (7644): Guest Log: [INFO] Checking for init_data.xml
2026-02-07 03:59:31 (7644): Guest Log: 00:00:10.038805 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 490 821 000ns (GuestNow=1 770 458 370 640 041 000 ns GuestLast=1 770 436 758 149 220 000 ns fSetTimeLastLoop=true )
2026-02-07 03:59:37 (7644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-07 03:59:37 (7644): Guest Log: [INFO] Detected branch: prod
2026-02-07 03:59:37 (7644): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-07 03:59:37 (7644): Guest Log: Copying input files
2026-02-07 03:59:44 (7644): Guest Log: Copied input files into RunAtlas.
2026-02-07 03:59:44 (7644): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-07 03:59:44 (7644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-07 03:59:44 (7644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-07 03:59:44 (7644): Guest Log: Further information can be found at the LHC@home message board.
2026-02-07 04:00:51 (7644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-07 04:00:51 (7644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-07 04:00:51 (7644): Guest Log: 2.6.3.0 1679 1 32168 155978 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-07 04:00:54 (7644): Guest Log: copied the webapp to /var/www
2026-02-07 04:00:54 (7644): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-07 04:00:54 (7644): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-07 04:00:54 (7644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-07 04:00:54 (7644): Guest Log:  *** Starting ATLAS job. (PandaID=7004058303 taskID=48317952) ***
2026-02-07 05:38:50 (7644): Status Report: Elapsed Time: '6000.000000'
2026-02-07 05:38:50 (7644): Status Report: CPU Time: '42794.734375'
2026-02-07 06:42:14 (7644): Guest Log:  *** Job finished ***
2026-02-07 06:42:14 (7644): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-07 06:42:14 (7644): Guest Log: 2026-02-07 12:41:35,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-07 06:42:14 (7644): Guest Log: 2026-02-07 12:41:35,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-07 06:42:14 (7644): Guest Log: 2026-02-07 12:42:04,451 | INFO     | [monitor] cgroup control has ended
2026-02-07 06:42:14 (7644): Guest Log: 2026-02-07 12:42:05,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698980087616)>', '<ExcThread(monitor, started 139698534065920)>']
2026-02-07 06:42:14 (7644): Guest Log: 2026-02-07 12:42:06,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:06,365 | INFO     | [monitor] control thread has ended
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,724 | INFO     | all workflow threads have been joined
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,725 | INFO     | end of generic workflow (traces error code: 0)
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,725 | INFO     | traces error code: 0
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,896 [wrapper] ==== pilot stdout END ====
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,905 [wrapper] ==== wrapper stdout RESUME ====
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,914 [wrapper] pilotpid: 6134
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:10,922 [wrapper] Pilot exit status: 0
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,029 [wrapper] pandaids: 7004058303
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,087 [wrapper] cleanup supervisor_pilot 27051 6135
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,104 [wrapper] Test setup, not cleaning
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,113 [wrapper] apfmon messages muted
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,122 [wrapper] ==== wrapper stdout END ====
2026-02-07 06:42:15 (7644): Guest Log: 2026-02-07 12:42:11,132 [wrapper] ==== wrapper stderr END ====
2026-02-07 06:42:15 (7644): Guest Log:  *** Error codes and diagnostics ***
2026-02-07 06:42:15 (7644): Guest Log:     "exeErrorCode": 0,
2026-02-07 06:42:15 (7644): Guest Log:     "exeErrorDiag": "",
2026-02-07 06:42:15 (7644): Guest Log:     "pilotErrorCode": 0,
2026-02-07 06:42:15 (7644): Guest Log:     "pilotErrorDiag": "",
2026-02-07 06:42:15 (7644): Guest Log:  *** Listing of results directory ***
2026-02-07 06:42:15 (7644): Guest Log: total 185680
2026-02-07 06:42:15 (7644): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 14:32 pilot3.tar.gz
2026-02-07 06:42:15 (7644): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 14:36 runpilot2-wrapper.sh
2026-02-07 06:42:15 (7644): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 14:38 queuedata.json
2026-02-07 06:42:15 (7644): Guest Log: -rwxr-xr-x. 1 atlas atlas      5980 Feb  7 09:59 init_data.xml
2026-02-07 06:42:15 (7644): Guest Log: -rwxr-xr-x. 1 atlas atlas    597951 Feb  7 09:59 input.tar.gz
2026-02-07 06:42:15 (7644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  7 09:59 start_atlas.sh
2026-02-07 06:42:15 (7644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  7 09:59 EVNT.48317949._000257.pool.root.1 -> /data/./ATLAS.root_0
2026-02-07 06:42:15 (7644): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Feb  7 10:00 pandaJob.out
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas   1009504 Feb  7 10:01 agis_schedconf.cvmfs.json
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  7 10:01 agis_ddmendpoints.agis.ALL.json
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas       440 Feb  7 10:01 workernode_map.json
2026-02-07 06:42:15 (7644): Guest Log: drwx------. 5 atlas atlas      4096 Feb  7 10:01 pilot3
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas 182759086 Feb  7 12:40 HITS.48317952._013715.pool.root.1
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas      1032 Feb  7 12:40 memory_monitor_summary.json
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas    412384 Feb  7 12:41 log.48317952._013715.job.log.tgz.1
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas      6395 Feb  7 12:41 heartbeat.json
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas        95 Feb  7 12:41 pilot_heartbeat.json
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas      5316 Feb  7 12:42 pilotlog.txt
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas   1343858 Feb  7 12:42 log.48317952._013715.job.log.1
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas       357 Feb  7 12:42 output.list
2026-02-07 06:42:15 (7644): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  7 12:42 runtime_log
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas   1771520 Feb  7 12:42 result.tar.gz
2026-02-07 06:42:15 (7644): Guest Log: -rw-r--r--. 1 atlas atlas      8754 Feb  7 12:42 runtime_log.err
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas       656 Feb  7 12:42 JYAMDmV7b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwFZKDmypljbm.diag
2026-02-07 06:42:15 (7644): Guest Log: Looking for outputfile HITS.48317952._013715.pool.root.1
2026-02-07 06:42:15 (7644): Guest Log: HITS file was successfully produced
2026-02-07 06:42:15 (7644): Guest Log: -rw-------. 1 atlas atlas 182759086 Feb  7 12:40 /home/atlas/RunAtlas/HITS.48317952._013715.pool.root.1
2026-02-07 06:42:17 (7644): Guest Log: Successfully finished the ATLAS job!
2026-02-07 06:42:17 (7644): Guest Log: Copying the results back to the shared directory!
2026-02-07 06:42:17 (7644): Guest Log:  *** Contents of shared directory: ***
2026-02-07 06:42:18 (7644): Guest Log: total 667556
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root 498419607 Feb  7 09:58 ATLAS.root_0
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root 182759086 Feb  7 12:42 HITS.pool.root.1
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root      5980 Feb  7 09:58 init_data.xml
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root    597951 Feb  6 20:35 input.tar.gz
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root   1771520 Feb  7 12:42 result.tar.gz
2026-02-07 06:42:18 (7644): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 20:35 start_atlas.sh
2026-02-07 06:42:18 (7644): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-07 06:42:18 (7644): VM Completion File Detected.
2026-02-07 06:42:18 (7644): Powering off VM.
2026-02-07 06:42:21 (7644): Successfully stopped VM.
2026-02-07 06:42:21 (7644): Deregistering VM. (boinc_96079c07d19691af, slot#0)
2026-02-07 06:42:21 (7644): Removing network bandwidth throttle group from VM.
2026-02-07 06:42:22 (7644): Removing VM from VirtualBox.
2026-02-07 06:42:27 (7644): called boinc_finish(0)

</stderr_txt>
]]>

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