Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:22 (3156991): wrapper (7.7.26015): starting
06:51:22 (3156991): wrapper: running run_atlas (--nthreads 3)
[2026-02-07 06:51:22] Arguments: --nthreads 3
[2026-02-07 06:51:22] Threads: 3
[2026-02-07 06:51:22] Checking for CVMFS
[2026-02-07 06:51:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:51:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:51:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:51:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:51:23] 2.9.2.0 2962440 1275 72444 155973 2 50 26801122 36864001 0 130560 0 560897 99.980 53568 13295 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 06:51:23] CVMFS is ok
[2026-02-07 06:51:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:51:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:51:23] Further information can be found at the LHC@home message board.
[2026-02-07 06:51:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:51:23] Checking for apptainer binary...
[2026-02-07 06:51:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:51:23] Running /usr/bin/apptainer --version
[2026-02-07 06:51:23] apptainer version 1.4.1-1.1
[2026-02-07 06:51:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:51:23] magicA161a
[2026-02-07 06:51:23] apptainer works
[2026-02-07 06:51:23] Set ATHENA_PROC_NUMBER=3
[2026-02-07 06:51:23] Set ATHENA_CORE_NUMBER=3
[2026-02-07 06:51:23] Starting ATLAS job with PandaID=7003982518
[2026-02-07 06:51:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 08:15:44]  *** The last 200 lines of the pilot log: ***
[2026-02-07 08:15:44] 2026-02-07 07:15:04,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 08:15:44] 2026-02-07 07:15:04,786 | INFO     | [job] retrieve thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:04,786 | INFO     | [job] job monitor thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:04,797 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:04,895 | INFO     | [data] copytool_in thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,083 | INFO     | [payload] control thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,523 | INFO     | [job] control thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,580 | INFO     | [data] control thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,820 | INFO     | [payload] failed_post thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:05,953 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:06,161 | INFO     | [job] validate thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:06,253 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:06,342 | INFO     | [payload] validate_post thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:06,712 | INFO     | [data] copytool_out thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:06,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:15:44] 2026-02-07 07:15:07,777 | INFO     | [job] queue monitor thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:07,787 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 08:15:44] 2026-02-07 07:15:34,094 | INFO     | PID=3161034 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 08:15:44] 2026-02-07 07:15:34,094 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 08:15:44] 2026-02-07 07:15:34,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 08:15:44] 2026-02-07 07:15:34,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 08:15:44] 2026-02-07 07:15:38,233 | INFO     | [monitor] cgroup control has ended
[2026-02-07 08:15:44] 2026-02-07 07:15:39,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195023296320)>', '<ExcThread(monitor, started 140194669897472)>']
[2026-02-07 08:15:44] 2026-02-07 07:15:40,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 08:15:44] 2026-02-07 07:15:40,127 | INFO     | [monitor] control thread has ended
[2026-02-07 08:15:44] 2026-02-07 07:15:44,488 | INFO     | all workflow threads have been joined
[2026-02-07 08:15:44] 2026-02-07 07:15:44,489 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 08:15:44] 2026-02-07 07:15:44,489 | INFO     | traces error code: 0
[2026-02-07 08:15:44] 2026-02-07 07:15:44,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 08:15:44] 2026-02-07 07:15:44,538 [wrapper] ==== pilot stdout END ====
[2026-02-07 08:15:44] 2026-02-07 07:15:44,540 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 08:15:44] 2026-02-07 07:15:44,543 [wrapper] pilotpid: 3161034
[2026-02-07 08:15:44] 2026-02-07 07:15:44,545 [wrapper] Pilot exit status: 0
[2026-02-07 08:15:44] 2026-02-07 07:15:44,552 [wrapper] pandaids: 7003982518
[2026-02-07 08:15:44] 2026-02-07 07:15:44,568 [wrapper] cleanup supervisor_pilot 3170520 3161035
[2026-02-07 08:15:44] 2026-02-07 07:15:44,570 [wrapper] Test setup, not cleaning
[2026-02-07 08:15:44] 2026-02-07 07:15:44,572 [wrapper] apfmon messages muted
[2026-02-07 08:15:44] 2026-02-07 07:15:44,575 [wrapper] ==== wrapper stdout END ====
[2026-02-07 08:15:44] 2026-02-07 07:15:44,577 [wrapper] ==== wrapper stderr END ====
[2026-02-07 08:15:44]  *** Error codes and diagnostics ***
[2026-02-07 08:15:44]     "exeErrorCode": 0,
[2026-02-07 08:15:44]     "exeErrorDiag": "",
[2026-02-07 08:15:44]     "pilotErrorCode": 0,
[2026-02-07 08:15:44]     "pilotErrorDiag": "",
[2026-02-07 08:15:44]  *** Listing of results directory ***
[2026-02-07 08:15:44] total 665672
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc    584627 Feb  6 15:32 pilot3.tar.gz
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      5111 Feb  6 15:35 queuedata.json
[2026-02-07 08:15:44] -rwx------ 1 boinc boinc     36322 Feb  6 15:35 runpilot2-wrapper.sh
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc       100 Feb  7 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 08:15:44] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 06:51 run_atlas
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc       105 Feb  7 06:51 job.xml
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc 495446161 Feb  7 06:51 EVNT.48317889._000209.pool.root.1
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc    597952 Feb  7 06:51 input.tar.gz
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc     15845 Feb  7 06:51 start_atlas.sh
[2026-02-07 08:15:44] drwxrwx--x 2 boinc boinc      4096 Feb  7 06:51 shared
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc         0 Feb  7 06:51 boinc_setup_complete
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      6448 Feb  7 06:51 init_data.xml
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc         0 Feb  7 06:51 boinc_lockfile
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      2523 Feb  7 06:51 pandaJob.out
[2026-02-07 08:15:44] -rw------- 1 boinc boinc   1009512 Feb  7 06:51 agis_schedconf.cvmfs.json
[2026-02-07 08:15:44] -rw------- 1 boinc boinc   1513088 Feb  7 06:51 agis_ddmendpoints.agis.ALL.json
[2026-02-07 08:15:44] -rw------- 1 boinc boinc       427 Feb  7 06:51 workernode_map.json
[2026-02-07 08:15:44] drwx------ 5 boinc boinc      4096 Feb  7 06:51 pilot3
[2026-02-07 08:15:44] -rw------- 1 boinc boinc 180218494 Feb  7 08:14 HITS.48317892._014608.pool.root.1
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc       530 Feb  7 08:14 boinc_task_state.xml
[2026-02-07 08:15:44] -rw------- 1 boinc boinc        95 Feb  7 08:14 pilot_heartbeat.json
[2026-02-07 08:15:44] -rw------- 1 boinc boinc      1016 Feb  7 08:14 memory_monitor_summary.json
[2026-02-07 08:15:44] -rw------- 1 boinc boinc    295952 Feb  7 08:15 log.48317892._014608.job.log.tgz.1
[2026-02-07 08:15:44] -rw------- 1 boinc boinc      6313 Feb  7 08:15 heartbeat.json
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc        27 Feb  7 08:15 wrapper_checkpoint.txt
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      8192 Feb  7 08:15 boinc_mmap_file
[2026-02-07 08:15:44] -rw------- 1 boinc boinc      5272 Feb  7 08:15 pilotlog.txt
[2026-02-07 08:15:44] -rw------- 1 boinc boinc    733330 Feb  7 08:15 log.48317892._014608.job.log.1
[2026-02-07 08:15:44] -rw------- 1 boinc boinc       357 Feb  7 08:15 output.list
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc       620 Feb  7 08:15 runtime_log
[2026-02-07 08:15:44] -rw------- 1 boinc boinc   1044480 Feb  7 08:15 result.tar.gz
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      8916 Feb  7 08:15 runtime_log.err
[2026-02-07 08:15:44] -rw------- 1 boinc boinc       661 Feb  7 08:15 mp4LDmI7b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwDZKDmZYwj3m.diag
[2026-02-07 08:15:44] -rw-r--r-- 1 boinc boinc      6560 Feb  7 08:15 stderr.txt
[2026-02-07 08:15:44] HITS file was successfully produced:
[2026-02-07 08:15:44] -rw------- 1 boinc boinc 180218494 Feb  7 08:14 shared/HITS.pool.root.1
[2026-02-07 08:15:44]  *** Contents of shared directory: ***
[2026-02-07 08:15:44] total 661460
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc 495446161 Feb  7 06:51 ATLAS.root_0
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc    597952 Feb  7 06:51 input.tar.gz
[2026-02-07 08:15:44] -rw-r--r-- 2 boinc boinc     15845 Feb  7 06:51 start_atlas.sh
[2026-02-07 08:15:44] -rw------- 1 boinc boinc 180218494 Feb  7 08:14 HITS.pool.root.1
[2026-02-07 08:15:44] -rw------- 1 boinc boinc   1044480 Feb  7 08:15 result.tar.gz
08:16:06 (3156991): run_atlas exited; CPU time 14307.004144
08:16:06 (3156991): called boinc_finish(0)

</stderr_txt>
]]>

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