Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:48:42 (2942918): wrapper (7.7.26015): starting
05:48:42 (2942918): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 05:48:42] Arguments: --nthreads 12
[2026-02-07 05:48:42] Threads: 12
[2026-02-07 05:48:42] Checking for CVMFS
[2026-02-07 05:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 05:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 05:48:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 05:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 05:48:45] 2.13.3.0 8359 1497 119028 155971 1 431 33461369 46080000 20760 130560 0 4852564 99.847 2506809 14484 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-07 05:48:45] CVMFS is ok
[2026-02-07 05:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 05:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 05:48:45] Further information can be found at the LHC@home message board.
[2026-02-07 05:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 05:48:45] Checking for apptainer binary...
[2026-02-07 05:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 05:48:45] Running /usr/bin/apptainer --version
[2026-02-07 05:48:45] apptainer version 1.4.5-2.el9
[2026-02-07 05:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 05:48:46] mff2104.farm.particle.cz
[2026-02-07 05:48:46] apptainer works
[2026-02-07 05:48:46] Set ATHENA_PROC_NUMBER=12
[2026-02-07 05:48:46] Set ATHENA_CORE_NUMBER=12
[2026-02-07 05:48:46] Starting ATLAS job with PandaID=6996348566
[2026-02-07 05:48:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 07:38:19]  *** The last 200 lines of the pilot log: ***
[2026-02-07 07:38:19]  guid=9c595223-d643-4232-a54c-9b2b704c63cc
[2026-02-07 07:38:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 07:38:19]  is_altstaged=None
[2026-02-07 07:38:19]  is_tar=False
[2026-02-07 07:38:19]  lfn=log.48442098._002446.job.log.tgz.1
[2026-02-07 07:38:19]  mtime=0
[2026-02-07 07:38:19]  protocol_id=None
[2026-02-07 07:38:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 07:38:19]  replicas=None
[2026-02-07 07:38:19]  scope=mc23_13p6TeV
[2026-02-07 07:38:19]  status=None
[2026-02-07 07:38:19]  status_code=0
[2026-02-07 07:38:19]  storage_token=
[2026-02-07 07:38:19]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6996348566/log.48442098._002446.job.log.tgz.1
[2026-02-07 07:38:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/13/log.48442098._002446.job.log.tgz.1
[2026-02-07 07:38:19]  workdir=None
[2026-02-07 07:38:19] ]
[2026-02-07 07:38:19] 2026-02-07 06:23:19,414 | INFO     | transferring file log.48442098._002446.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6996348566/log.48442098._002446.job.log.tgz.1 to /scratch/.boinc/slot
[2026-02-07 07:38:19] 2026-02-07 06:23:19,414 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6996348566/log.48442098._002446.job.log.tgz.1 /scratch/.boinc/slots/0/log.48442098._002446.j
[2026-02-07 07:38:19] 2026-02-07 06:23:19,664 | INFO     | adding to output.list: log.48442098._002446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/13/log.48442098._002446.job.log.tg
[2026-02-07 07:38:19] 2026-02-07 06:23:19,665 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 07:38:19] 2026-02-07 06:23:19,665 | INFO     | summary of transferred files:
[2026-02-07 07:38:19] 2026-02-07 06:23:19,665 | INFO     |  -- lfn=log.48442098._002446.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 07:38:19] 2026-02-07 06:23:19,665 | INFO     | stage-out finished correctly
[2026-02-07 07:38:19] 2026-02-07 06:23:21,027 | INFO     | time since job start (5529s) is within the limit (349056.0s)
[2026-02-07 07:38:19] 2026-02-07 06:23:21,443 | INFO     | monitor loop #387: job 0:6996348566 is in state 'finished'
[2026-02-07 07:38:19] 2026-02-07 06:23:21,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 07:38:19] 2026-02-07 06:23:22,933 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 07:38:19] 2026-02-07 06:23:23,044 | INFO     | time since job start (5531s) is within the limit (349056.0s)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,113 | INFO     | job 6996348566 has state=finished
[2026-02-07 07:38:19] 2026-02-07 06:23:23,113 | INFO     | preparing for final server update for job 6996348566 in state='finished'
[2026-02-07 07:38:19] 2026-02-07 06:23:23,114 | INFO     | reading metadata from: /scratch/.boinc/slots/0/PanDA_Pilot-6996348566/jobReport.json
[2026-02-07 07:38:19] 2026-02-07 06:23:23,116 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/0/workernode_map.json
[2026-02-07 07:38:19] 2026-02-07 06:23:23,117 | INFO     | this job has now completed (state=finished)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,117 | INFO     | log transfer has been attempted: DONE
[2026-02-07 07:38:19] 2026-02-07 06:23:23,117 | INFO     | job 6996348566 has finished - writing final server update
[2026-02-07 07:38:19] 2026-02-07 06:23:23,117 | INFO     | total number of processed events: 400 (read)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,136 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6996348566/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,137 | INFO     | extracted standard info from prmon json
[2026-02-07 07:38:19] 2026-02-07 06:23:23,137 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 07:38:19] 2026-02-07 06:23:23,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 07:38:19] 2026-02-07 06:23:23,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 07:38:19] 2026-02-07 06:23:23,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 07:38:19] 2026-02-07 06:23:23,139 | INFO     | fitting pss+swap vs Time
[2026-02-07 07:38:19] 2026-02-07 06:23:23,139 | INFO     | sum of square deviations: 177279670.4096387
[2026-02-07 07:38:19] 2026-02-07 06:23:23,140 | INFO     | sum of deviations: -680114021.3975905
[2026-02-07 07:38:19] 2026-02-07 06:23:23,140 | INFO     | mean x: 1770442732.0843372
[2026-02-07 07:38:19] 2026-02-07 06:23:23,140 | INFO     | mean y: 2697154.7710843375
[2026-02-07 07:38:19] 2026-02-07 06:23:23,140 | INFO     | intersect: 6794806613.174886
[2026-02-07 07:38:19] 2026-02-07 06:23:23,140 | INFO     | chi2: 0.006331013992311471
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | current memory leak: -3.84 B/s (using 83 data points, chi2=0.01)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | could have reported an average CPU frequency of 2705 MHz (7 samples)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | ..............................
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | . Timing measurements:
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | . get job = 0 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,141 | INFO     | . initial setup = 40 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | . payload setup = 32 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | . stage-in = 0 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | . payload execution = 5485 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | . stage-out = 2 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | . log creation = 0 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,142 | INFO     | ..............................
[2026-02-07 07:38:19] 2026-02-07 06:23:23,258 | INFO     | 
[2026-02-07 07:38:19] 2026-02-07 06:23:23,258 | INFO     | job summary report
[2026-02-07 07:38:19] 2026-02-07 06:23:23,258 | INFO     | --------------------------------------------------
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | PanDA job id: 6996348566
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | task id: 48442098
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | errors: (none)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | pilot state: finished 
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | transexitcode: 0
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | exeerrorcode: 0
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | exeerrordiag: 
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | exitcode: 0
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | exitmsg: OK
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | cpuconsumptiontime: 39300 s
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | nevents: 400
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | neventsw: 0
[2026-02-07 07:38:19] 2026-02-07 06:23:23,259 | INFO     | pid: 2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | pgrp: 2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | corecount: 12
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | event service: False
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | sizes: {0: 2282661, 1: 2283122, 5523: 2309826, 5526: 2318826, 5529: 2318882, 5530: 2319076}
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | --------------------------------------------------
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | 
[2026-02-07 07:38:19] 2026-02-07 06:23:23,260 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-02-07 07:38:19] 2026-02-07 06:23:23,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,448 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,449 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 07:38:19] 2026-02-07 06:23:23,449 | INFO     | job 6996348566 has completed (purged errors)
[2026-02-07 07:38:19] 2026-02-07 06:23:23,449 | INFO     | overall cleanup function is called
[2026-02-07 07:38:19] 2026-02-07 06:23:24,468 | INFO     | --- collectZombieJob: --- 10, [2958262]
[2026-02-07 07:38:19] 2026-02-07 06:23:24,468 | INFO     | zombie collector waiting for pid 2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:24,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 07:38:19] 2026-02-07 06:23:24,469 | INFO     | collected zombie processes
[2026-02-07 07:38:19] 2026-02-07 06:23:24,469 | INFO     | will attempt to kill all subprocesses of pid=2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:24,964 | INFO     | process IDs to be killed: [2958262] (in reverse order)
[2026-02-07 07:38:19] 2026-02-07 06:23:25,550 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 07:38:19] 2026-02-07 06:23:25,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 07:38:19] 2026-02-07 06:23:25,577 | INFO     | did not find any defunct processes belonging to 2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:25,604 | INFO     | did not find any defunct processes belonging to 2958262
[2026-02-07 07:38:19] 2026-02-07 06:23:25,605 | INFO     | ready for new job
[2026-02-07 07:38:19] 2026-02-07 06:23:25,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 07:38:19] 2026-02-07 06:23:25,607 | INFO     | **************************************
[2026-02-07 07:38:19] 2026-02-07 06:23:25,607 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 07:38:19] 2026-02-07 06:23:25,607 | INFO     | **************************************
[2026-02-07 07:38:19] 2026-02-07 06:23:25,607 | INFO     | 
[2026-02-07 07:38:19] 2026-02-07 06:23:25,624 | INFO     | architecture information:
[2026-02-07 07:38:19] 2026-02-07 06:23:25,627 | INFO     | executing command: cat /etc/os-release
[2026-02-07 07:38:19] 2026-02-07 06:23:25,791 | INFO     | cat /etc/os-release:
[2026-02-07 07:38:19] NAME="CentOS Linux"
[2026-02-07 07:38:19] VERSION="7 (Core)"
[2026-02-07 07:38:19] ID="centos"
[2026-02-07 07:38:19] ID_LIKE="rhel fedora"
[2026-02-07 07:38:19] VERSION_ID="7"
[2026-02-07 07:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 07:38:19] ANSI_COLOR="0;31"
[2026-02-07 07:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 07:38:19] HOME_URL="https://www.centos.org/"
[2026-02-07 07:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 07:38:19] 
[2026-02-07 07:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 07:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 07:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 07:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 07:38:19] 
[2026-02-07 07:38:19] 2026-02-07 06:23:25,791 | INFO     | **************************************
[2026-02-07 07:38:19] 2026-02-07 06:23:26,294 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-02-07 07:38:19] 2026-02-07 06:23:26,438 | INFO     | sufficient remaining disk space (1473786150912 B)
[2026-02-07 07:38:19] 2026-02-07 06:23:26,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 07:38:19] 2026-02-07 06:23:26,438 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 07:38:19] 2026-02-07 06:23:26,438 | INFO     | update_server=False
[2026-02-07 07:38:19] 2026-02-07 06:23:26,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 07:38:19] 2026-02-07 06:23:26,466 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 07:38:19] 2026-02-07 06:23:26,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 07:38:19] 2026-02-07 06:23:26,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:38:19] 2026-02-07 06:23:26,467 | INFO     | will abort loop
[2026-02-07 07:38:19] 2026-02-07 06:23:27,076 | INFO     | all data control threads have been joined
[2026-02-07 07:38:19] 2026-02-07 06:23:27,287 | INFO     | all payload control threads have been joined
[2026-02-07 07:38:19] 2026-02-07 06:23:27,444 | INFO     | [job] retrieve thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:27,472 | INFO     | [job] job monitor thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:27,583 | INFO     | all job control threads have been joined
[2026-02-07 07:38:19] 2026-02-07 06:23:27,689 | INFO     | [data] copytool_in thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:27,858 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:27,874 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:27,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 07:38:19] 2026-02-07 06:23:28,081 | INFO     | [data] control thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,180 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:38:19] 2026-02-07 06:23:28,293 | INFO     | [payload] control thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,516 | INFO     | [job] validate thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,589 | INFO     | [job] control thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,710 | INFO     | [payload] validate_post thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,717 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:28,718 | INFO     | [payload] failed_post thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:29,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 07:38:19] 2026-02-07 06:23:29,278 | INFO     | [job] queue monitor thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:29,889 | INFO     | [data] copytool_out thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:33,143 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 07:38:19] 2026-02-07 06:23:57,012 | INFO     | PID=2947910 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 07:38:19] 2026-02-07 06:23:57,012 | INFO     | .. there are 18 such processes running
[2026-02-07 07:38:19] 2026-02-07 06:23:57,012 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 07:38:19] 2026-02-07 06:23:57,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 07:38:19] 2026-02-07 06:23:57,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 07:38:19] 2026-02-07 06:24:20,571 | INFO     | [monitor] cgroup control has ended
[2026-02-07 07:38:19] 2026-02-07 06:24:22,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634568767296)>', '<ExcThread(monitor, started 140634295125760)>']
[2026-02-07 07:38:19] 2026-02-07 06:24:23,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 07:38:19] 2026-02-07 06:24:23,174 | INFO     | [monitor] control thread has ended
[2026-02-07 07:38:19] 2026-02-07 06:24:27,461 | INFO     | all workflow threads have been joined
[2026-02-07 07:38:19] 2026-02-07 06:24:27,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 07:38:19] 2026-02-07 06:24:27,462 | INFO     | traces error code: 0
[2026-02-07 07:38:19] 2026-02-07 06:24:27,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 07:38:19] 2026-02-07 06:24:27,802 [wrapper] ==== pilot stdout END ====
[2026-02-07 07:38:19] 2026-02-07 06:24:27,830 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 07:38:19] 2026-02-07 06:24:27,873 [wrapper] pilotpid: 2947910
[2026-02-07 07:38:19] 2026-02-07 06:24:27,919 [wrapper] Pilot exit status: 0
[2026-02-07 07:38:19] 2026-02-07 06:24:28,101 [wrapper] pandaids: 6996348566
[2026-02-07 07:38:19] 2026-02-07 06:24:28,630 [wrapper] cleanup supervisor_pilot 3153664 2947911
[2026-02-07 07:38:19] 2026-02-07 06:24:28,660 [wrapper] Test setup, not cleaning
[2026-02-07 07:38:19] 2026-02-07 06:24:28,704 [wrapper] apfmon messages muted
[2026-02-07 07:38:19] 2026-02-07 06:24:28,748 [wrapper] ==== wrapper stdout END ====
[2026-02-07 07:38:19] 2026-02-07 06:24:28,796 [wrapper] ==== wrapper stderr END ====
[2026-02-07 07:38:19]  *** Error codes and diagnostics ***
[2026-02-07 07:38:19]     "exeErrorCode": 0,
[2026-02-07 07:38:19]     "exeErrorDiag": "",
[2026-02-07 07:38:19]     "pilotErrorCode": 0,
[2026-02-07 07:38:19]     "pilotErrorDiag": "",
[2026-02-07 07:38:19]  *** Listing of results directory ***
[2026-02-07 07:38:19] total 670416
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:58 pilot3.tar.gz
[2026-02-07 07:38:19] -rwx------ 1 boinc boinc     36322 Feb  6 06:09 runpilot2-wrapper.sh
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc      5111 Feb  6 06:09 queuedata.json
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc       100 Feb  7 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 07:38:19] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 05:48 run_atlas
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc       105 Feb  7 05:48 job.xml
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc      6676 Feb  7 05:48 init_data.xml
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc 496319290 Feb  7 05:48 EVNT.48442096._000049.pool.root.1
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc    597950 Feb  7 05:48 input.tar.gz
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:48 start_atlas.sh
[2026-02-07 07:38:19] drwxrwx--x 2 boinc boinc      4096 Feb  7 05:48 shared
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc         0 Feb  7 05:48 boinc_lockfile
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc      2528 Feb  7 05:48 pandaJob.out
[2026-02-07 07:38:19] -rw------- 1 boinc boinc   1009504 Feb  7 05:50 agis_schedconf.cvmfs.json
[2026-02-07 07:38:19] -rw------- 1 boinc boinc   1513088 Feb  7 05:50 agis_ddmendpoints.agis.ALL.json
[2026-02-07 07:38:19] -rw------- 1 boinc boinc       435 Feb  7 05:51 workernode_map.json
[2026-02-07 07:38:19] drwx------ 5 boinc boinc      4096 Feb  7 05:51 pilot3
[2026-02-07 07:38:19] -rw------- 1 boinc boinc 183801890 Feb  7 07:22 HITS.48442098._002446.pool.root.1
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc       529 Feb  7 07:22 boinc_task_state.xml
[2026-02-07 07:38:19] -rw------- 1 boinc boinc        95 Feb  7 07:23 pilot_heartbeat.json
[2026-02-07 07:38:19] -rw------- 1 boinc boinc      1028 Feb  7 07:23 memory_monitor_summary.json
[2026-02-07 07:38:19] -rw------- 1 boinc boinc    433745 Feb  7 07:23 log.48442098._002446.job.log.tgz.1
[2026-02-07 07:38:19] -rw------- 1 boinc boinc      6339 Feb  7 07:23 heartbeat.json
[2026-02-07 07:38:19] -rw------- 1 boinc boinc      5009 Feb  7 07:24 pilotlog.txt
[2026-02-07 07:38:19] -rw------- 1 boinc boinc    787388 Feb  7 07:24 log.48442098._002446.job.log.1
[2026-02-07 07:38:19] -rw------- 1 boinc boinc       357 Feb  7 07:24 output.list
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc       620 Feb  7 07:24 runtime_log
[2026-02-07 07:38:19] -rw------- 1 boinc boinc   1239040 Feb  7 07:24 result.tar.gz
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc      8879 Feb  7 07:24 runtime_log.err
[2026-02-07 07:38:19] -rw------- 1 boinc boinc       663 Feb  7 07:24 njSLDm1GT88n9Rq4apOajLDm4fhM0noT9bVooX4SDmBaXKDmUzVSSo.diag
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc        26 Feb  7 07:38 wrapper_checkpoint.txt
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc      8192 Feb  7 07:38 boinc_mmap_file
[2026-02-07 07:38:19] -rw-r--r-- 1 boinc boinc     21407 Feb  7 07:38 stderr.txt
[2026-02-07 07:38:19] HITS file was successfully produced:
[2026-02-07 07:38:19] -rw------- 1 boinc boinc 183801890 Feb  7 07:22 shared/HITS.pool.root.1
[2026-02-07 07:38:19]  *** Contents of shared directory: ***
[2026-02-07 07:38:19] total 666004
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc 496319290 Feb  7 05:48 ATLAS.root_0
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc    597950 Feb  7 05:48 input.tar.gz
[2026-02-07 07:38:19] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:48 start_atlas.sh
[2026-02-07 07:38:19] -rw------- 1 boinc boinc 183801890 Feb  7 07:22 HITS.pool.root.1
[2026-02-07 07:38:19] -rw------- 1 boinc boinc   1239040 Feb  7 07:24 result.tar.gz
07:38:21 (2942918): run_atlas exited; CPU time 39467.894638
07:38:21 (2942918): called boinc_finish(0)

</stderr_txt>
]]>

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