Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:32 (8223): wrapper (7.7.26015): starting
14:28:32 (8223): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 14:28:32] Arguments: --nthreads 12
[2026-02-06 14:28:32] Threads: 12
[2026-02-06 14:28:32] Checking for CVMFS
[2026-02-06 14:28:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 14:28:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 14:28:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 14:28:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 14:28:33] 2.11.2.0 3009 177048 105044 155958 0 51 14480195 20275200 1 130560 0 69617021 99.901 9941355 34197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 14:28:33] CVMFS is ok
[2026-02-06 14:28:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 14:28:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 14:28:33] Further information can be found at the LHC@home message board.
[2026-02-06 14:28:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 14:28:33] Checking for apptainer binary...
[2026-02-06 14:28:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 14:28:33] Running /usr/bin/apptainer --version
[2026-02-06 14:28:33] apptainer version 1.3.2-1.el7
[2026-02-06 14:28:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 14:28:34] c-115-42.aglt2.org
[2026-02-06 14:28:34] apptainer works
[2026-02-06 14:28:34] Set ATHENA_PROC_NUMBER=12
[2026-02-06 14:28:34] Set ATHENA_CORE_NUMBER=12
[2026-02-06 14:28:34] Starting ATLAS job with PandaID=6996352244
[2026-02-06 14:28:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 15:35:04]  *** The last 200 lines of the pilot log: ***
[2026-02-06 15:35:04]  is_tar=False
[2026-02-06 15:35:04]  lfn=log.48466714._000286.job.log.tgz.1
[2026-02-06 15:35:04]  mtime=0
[2026-02-06 15:35:04]  protocol_id=None
[2026-02-06 15:35:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-06 15:35:04]  replicas=None
[2026-02-06 15:35:04]  scope=mc23_13p6TeV
[2026-02-06 15:35:04]  status=None
[2026-02-06 15:35:04]  status_code=0
[2026-02-06 15:35:04]  storage_token=
[2026-02-06 15:35:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996352244/log.48466714._000286.job.log.tgz.1
[2026-02-06 15:35:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/bc/log.48466714._000286.job.log.tgz.1
[2026-02-06 15:35:04]  workdir=None
[2026-02-06 15:35:04] ]
[2026-02-06 15:35:04] 2026-02-06 20:34:20,769 | INFO     | transferring file log.48466714._000286.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996352244/log.48466714._000286.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-06 15:35:04] 2026-02-06 20:34:20,769 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996352244/log.48466714._000286.job.log.tgz.1 /tmp/boinchome/slots/0/log.48466714._000286.job
[2026-02-06 15:35:04] 2026-02-06 20:34:20,790 | INFO     | adding to output.list: log.48466714._000286.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/bc/log.48466714._000286.job.log.tg
[2026-02-06 15:35:04] 2026-02-06 20:34:20,791 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-06 15:35:04] 2026-02-06 20:34:20,792 | INFO     | summary of transferred files:
[2026-02-06 15:35:04] 2026-02-06 20:34:20,792 | INFO     |  -- lfn=log.48466714._000286.job.log.tgz.1, status_code=0, status=transferred
[2026-02-06 15:35:04] 2026-02-06 20:34:20,792 | INFO     | stage-out finished correctly
[2026-02-06 15:35:04] 2026-02-06 20:34:22,286 | WARNING  | process 16405 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 15:35:04] 2026-02-06 20:34:22,286 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996352244/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 15:35:04] 2026-02-06 20:34:22,367 | INFO     | number of running child processes to parent process 16405: 1
[2026-02-06 15:35:04] 2026-02-06 20:34:22,367 | INFO     | maximum number of monitored processes: 6
[2026-02-06 15:35:04] 2026-02-06 20:34:22,429 | INFO     | time since job start (3929s) is within the limit (349056.0s)
[2026-02-06 15:35:04] 2026-02-06 20:34:23,855 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-06 15:35:04] 2026-02-06 20:34:24,434 | INFO     | time since job start (3931s) is within the limit (349056.0s)
[2026-02-06 15:35:04] 2026-02-06 20:34:24,868 | INFO     | monitor loop #299: job 0:6996352244 is in state 'finished'
[2026-02-06 15:35:04] 2026-02-06 20:34:24,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,440 | INFO     | time since job start (3933s) is within the limit (349056.0s)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,612 | INFO     | job 6996352244 has state=finished
[2026-02-06 15:35:04] 2026-02-06 20:34:26,612 | INFO     | preparing for final server update for job 6996352244 in state='finished'
[2026-02-06 15:35:04] 2026-02-06 20:34:26,612 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996352244/jobReport.json
[2026-02-06 15:35:04] 2026-02-06 20:34:26,615 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-06 15:35:04] 2026-02-06 20:34:26,616 | INFO     | this job has now completed (state=finished)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,616 | INFO     | log transfer has been attempted: DONE
[2026-02-06 15:35:04] 2026-02-06 20:34:26,616 | INFO     | job 6996352244 has finished - writing final server update
[2026-02-06 15:35:04] 2026-02-06 20:34:26,616 | INFO     | total number of processed events: 400 (read)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,618 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996352244/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,618 | INFO     | extracted standard info from prmon json
[2026-02-06 15:35:04] 2026-02-06 20:34:26,618 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 15:35:04] 2026-02-06 20:34:26,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 15:35:04] 2026-02-06 20:34:26,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 15:35:04] 2026-02-06 20:34:26,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 15:35:04] 2026-02-06 20:34:26,620 | INFO     | fitting pss+swap vs Time
[2026-02-06 15:35:04] 2026-02-06 20:34:26,620 | INFO     | sum of square deviations: 57407588.0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,620 | INFO     | sum of deviations: -4301262988.0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | mean x: 1770408170.0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | mean y: 2916203.3157894737
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | intersect: 132650731597.9255
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | chi2: 0.06584336281460075
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | current memory leak: -74.92 B/s (using 57 data points, chi2=0.07)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,621 | INFO     | ..............................
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . Timing measurements:
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . get job = 0 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . initial setup = 7 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . payload setup = 7 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . stage-in = 0 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . payload execution = 3904 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . stage-out = 0 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | . log creation = 0 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,622 | INFO     | ..............................
[2026-02-06 15:35:04] 2026-02-06 20:34:26,692 | INFO     | 
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | job summary report
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | --------------------------------------------------
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | PanDA job id: 6996352244
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | task id: 48466714
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | errors: (none)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,693 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | pilot state: finished 
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | transexitcode: 0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | exeerrorcode: 0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | exeerrordiag: 
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | exitcode: 0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,694 | INFO     | exitmsg: OK
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | cpuconsumptiontime: 42388 s
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | nevents: 400
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | neventsw: 0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | pid: 16405
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | pgrp: 16405
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | corecount: 12
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | event service: False
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | sizes: {0: 2282617, 1: 2283078, 11: 2283078, 3915: 2308852, 3916: 2317850, 3919: 2317906, 3922: 2318228}
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | --------------------------------------------------
[2026-02-06 15:35:04] 2026-02-06 20:34:26,695 | INFO     | 
[2026-02-06 15:35:04] 2026-02-06 20:34:26,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 15:35:04] 2026-02-06 20:34:26,719 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,719 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,719 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 15:35:04] 2026-02-06 20:34:26,722 | INFO     | job 6996352244 has completed (purged errors)
[2026-02-06 15:35:04] 2026-02-06 20:34:26,723 | INFO     | overall cleanup function is called
[2026-02-06 15:35:04] 2026-02-06 20:34:27,730 | INFO     | --- collectZombieJob: --- 10, [16405]
[2026-02-06 15:35:04] 2026-02-06 20:34:27,730 | INFO     | zombie collector waiting for pid 16405
[2026-02-06 15:35:04] 2026-02-06 20:34:27,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 15:35:04] 2026-02-06 20:34:27,731 | INFO     | collected zombie processes
[2026-02-06 15:35:04] 2026-02-06 20:34:27,731 | INFO     | will attempt to kill all subprocesses of pid=16405
[2026-02-06 15:35:04] 2026-02-06 20:34:27,815 | INFO     | process IDs to be killed: [16405] (in reverse order)
[2026-02-06 15:35:04] 2026-02-06 20:34:27,866 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 15:35:04] 2026-02-06 20:34:27,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 15:35:04] 2026-02-06 20:34:27,870 | INFO     | did not find any defunct processes belonging to 16405
[2026-02-06 15:35:04] 2026-02-06 20:34:27,874 | INFO     | did not find any defunct processes belonging to 16405
[2026-02-06 15:35:04] 2026-02-06 20:34:27,874 | INFO     | ready for new job
[2026-02-06 15:35:04] 2026-02-06 20:34:27,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 15:35:04] 2026-02-06 20:34:27,876 | INFO     | **************************************
[2026-02-06 15:35:04] 2026-02-06 20:34:27,876 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 15:35:04] 2026-02-06 20:34:27,876 | INFO     | **************************************
[2026-02-06 15:35:04] 2026-02-06 20:34:27,876 | INFO     | 
[2026-02-06 15:35:04] 2026-02-06 20:34:27,877 | INFO     | architecture information:
[2026-02-06 15:35:04] 2026-02-06 20:34:27,877 | INFO     | executing command: cat /etc/os-release
[2026-02-06 15:35:04] 2026-02-06 20:34:27,892 | INFO     | cat /etc/os-release:
[2026-02-06 15:35:04] NAME="CentOS Linux"
[2026-02-06 15:35:04] VERSION="7 (Core)"
[2026-02-06 15:35:04] ID="centos"
[2026-02-06 15:35:04] ID_LIKE="rhel fedora"
[2026-02-06 15:35:04] VERSION_ID="7"
[2026-02-06 15:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 15:35:04] ANSI_COLOR="0;31"
[2026-02-06 15:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 15:35:04] HOME_URL="https://www.centos.org/"
[2026-02-06 15:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 15:35:04] 
[2026-02-06 15:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 15:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 15:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 15:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 15:35:04] 
[2026-02-06 15:35:04] 2026-02-06 20:34:27,892 | INFO     | **************************************
[2026-02-06 15:35:04] 2026-02-06 20:34:28,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 15:35:04] 2026-02-06 20:34:28,412 | INFO     | sufficient remaining disk space (17937989632 B)
[2026-02-06 15:35:04] 2026-02-06 20:34:28,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 15:35:04] 2026-02-06 20:34:28,413 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 15:35:04] 2026-02-06 20:34:28,413 | INFO     | update_server=False
[2026-02-06 15:35:04] 2026-02-06 20:34:28,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 15:35:04] 2026-02-06 20:34:28,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 15:35:04] 2026-02-06 20:34:28,414 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-06 15:35:04] 2026-02-06 20:34:28,414 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 15:35:04] 2026-02-06 20:34:28,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 15:35:04] 2026-02-06 20:34:28,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 15:35:04] 2026-02-06 20:34:28,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 15:35:04] 2026-02-06 20:34:28,415 | INFO     | aborting loop
[2026-02-06 15:35:04] 2026-02-06 20:34:28,614 | INFO     | all job control threads have been joined
[2026-02-06 15:35:04] 2026-02-06 20:34:28,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 15:35:04] 2026-02-06 20:34:29,416 | INFO     | [job] job monitor thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,417 | INFO     | [job] retrieve thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,419 | INFO     | [job] queue monitor thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,428 | INFO     | all data control threads have been joined
[2026-02-06 15:35:04] 2026-02-06 20:34:29,439 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,619 | INFO     | [job] control thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,624 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,625 | INFO     | [data] copytool_in thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:29,663 | INFO     | all payload control threads have been joined
[2026-02-06 15:35:04] 2026-02-06 20:34:29,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 15:35:04] 2026-02-06 20:34:30,046 | INFO     | [payload] validate_post thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,433 | INFO     | [data] control thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,442 | INFO     | [job] validate thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,569 | INFO     | [payload] failed_post thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,668 | INFO     | [payload] control thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,882 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:30,887 | INFO     | [data] copytool_out thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:33,941 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:39,199 | INFO     | job.realtimelogging is not enabled
[2026-02-06 15:35:04] 2026-02-06 20:34:40,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 15:35:04] 2026-02-06 20:34:59,199 | INFO     | [monitor] cgroup control has ended
[2026-02-06 15:35:04] 2026-02-06 20:34:59,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717881124672)>', '<ExcThread(monitor, started 140716483278592)>']
[2026-02-06 15:35:04] 2026-02-06 20:34:59,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 15:35:04] 2026-02-06 20:34:59,554 | INFO     | [monitor] control thread has ended
[2026-02-06 15:35:04] 2026-02-06 20:35:04,551 | INFO     | all workflow threads have been joined
[2026-02-06 15:35:04] 2026-02-06 20:35:04,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 15:35:04] 2026-02-06 20:35:04,552 | INFO     | traces error code: 0
[2026-02-06 15:35:04] 2026-02-06 20:35:04,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 15:35:04] 2026-02-06 20:35:04,647 [wrapper] ==== pilot stdout END ====
[2026-02-06 15:35:04] 2026-02-06 20:35:04,651 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 15:35:04] 2026-02-06 20:35:04,655 [wrapper] pilotpid: 11983
[2026-02-06 15:35:04] 2026-02-06 20:35:04,658 [wrapper] Pilot exit status: 0
[2026-02-06 15:35:04] 2026-02-06 20:35:04,673 [wrapper] pandaids: 6996352244
[2026-02-06 15:35:04] 2026-02-06 20:35:04,712 [wrapper] cleanup supervisor_pilot  8361 11984
[2026-02-06 15:35:04] 2026-02-06 20:35:04,716 [wrapper] Test setup, not cleaning
[2026-02-06 15:35:04] 2026-02-06 20:35:04,720 [wrapper] apfmon messages muted
[2026-02-06 15:35:04] 2026-02-06 20:35:04,723 [wrapper] ==== wrapper stdout END ====
[2026-02-06 15:35:04] 2026-02-06 20:35:04,727 [wrapper] ==== wrapper stderr END ====
[2026-02-06 15:35:04]  *** Error codes and diagnostics ***
[2026-02-06 15:35:04]     "exeErrorCode": 0,
[2026-02-06 15:35:04]     "exeErrorDiag": "",
[2026-02-06 15:35:04]     "pilotErrorCode": 0,
[2026-02-06 15:35:04]     "pilotErrorDiag": "",
[2026-02-06 15:35:04]  *** Listing of results directory ***
[2026-02-06 15:35:04] total 714664
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas    584627 Feb  6 00:55 pilot3.tar.gz
[2026-02-06 15:35:04] -rwx------ 1 boincer umatlas     36322 Feb  6 00:56 runpilot2-wrapper.sh
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas      5111 Feb  6 00:58 queuedata.json
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas       100 Feb  6 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 15:35:04] -rwxr-xr-x 1 boincer umatlas      7986 Feb  6 14:28 run_atlas
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas       105 Feb  6 14:28 job.xml
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas 532818386 Feb  6 14:28 EVNT.48466711._000004.pool.root.1
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 14:28 start_atlas.sh
[2026-02-06 15:35:04] drwxrwx--x 2 boincer umatlas      4096 Feb  6 14:28 shared
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas    597939 Feb  6 14:28 input.tar.gz
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas         0 Feb  6 14:28 boinc_lockfile
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas      2496 Feb  6 14:28 pandaJob.out
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas        57 Feb  6 14:28 setup.sh.local
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas   1009512 Feb  6 14:28 agis_schedconf.cvmfs.json
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas   1513088 Feb  6 14:28 agis_ddmendpoints.agis.ALL.json
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas       445 Feb  6 14:28 workernode_map.json
[2026-02-06 15:35:04] drwx------ 5 boincer umatlas      4096 Feb  6 14:28 pilot3
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas      5953 Feb  6 15:28 init_data.xml
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas        95 Feb  6 15:33 pilot_heartbeat.json
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas 193086510 Feb  6 15:33 HITS.48466714._000286.pool.root.1
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas       530 Feb  6 15:33 boinc_task_state.xml
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas      1044 Feb  6 15:34 memory_monitor_summary.json
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas    403471 Feb  6 15:34 log.48466714._000286.job.log.tgz.1
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas      6413 Feb  6 15:34 heartbeat.json
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas      8192 Feb  6 15:34 boinc_mmap_file
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas        27 Feb  6 15:34 wrapper_checkpoint.txt
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas      4620 Feb  6 15:35 pilotlog.txt
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas    579598 Feb  6 15:35 log.48466714._000286.job.log.1
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas       357 Feb  6 15:35 output.list
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas       620 Feb  6 15:35 runtime_log
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas   1003520 Feb  6 15:35 result.tar.gz
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas      9343 Feb  6 15:35 runtime_log.err
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas       659 Feb  6 15:35 AlMODml0T88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzEYKDmqvCHdn.diag
[2026-02-06 15:35:04] -rw-r--r-- 1 boincer umatlas     21491 Feb  6 15:35 stderr.txt
[2026-02-06 15:35:04] HITS file was successfully produced:
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas 193086510 Feb  6 15:33 shared/HITS.pool.root.1
[2026-02-06 15:35:04]  *** Contents of shared directory: ***
[2026-02-06 15:35:04] total 710480
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas 532818386 Feb  6 14:28 ATLAS.root_0
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 14:28 start_atlas.sh
[2026-02-06 15:35:04] -rw-r--r-- 2 boincer umatlas    597939 Feb  6 14:28 input.tar.gz
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas 193086510 Feb  6 15:33 HITS.pool.root.1
[2026-02-06 15:35:04] -rw------- 1 boincer umatlas   1003520 Feb  6 15:35 result.tar.gz
15:35:06 (8223): run_atlas exited; CPU time 42360.767017
15:35:06 (8223): called boinc_finish(0)

</stderr_txt>
]]>

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