Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:13 (563703): wrapper (7.7.26015): starting
16:39:13 (563703): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 16:39:13] Arguments: --nthreads 12
[2026-02-06 16:39:13] Threads: 12
[2026-02-06 16:39:13] Checking for CVMFS
[2026-02-06 16:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 16:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 16:39:13] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 16:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 16:39:13] 2.11.5.0 3627452 132485 232944 155965 2 396 40965413 45568000 24318 130560 0 1130649952 99.812 669230936 22688 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 16:39:13] CVMFS is ok
[2026-02-06 16:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 16:39:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 16:39:13] Further information can be found at the LHC@home message board.
[2026-02-06 16:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 16:39:13] Checking for apptainer binary...
[2026-02-06 16:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 16:39:13] Running /usr/bin/apptainer --version
[2026-02-06 16:39:13] apptainer version 1.4.1-1.el9
[2026-02-06 16:39:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 16:39:14] wns0050.triumf.lcg
[2026-02-06 16:39:14] apptainer works
[2026-02-06 16:39:14] Set ATHENA_PROC_NUMBER=12
[2026-02-06 16:39:14] Set ATHENA_CORE_NUMBER=12
[2026-02-06 16:39:14] Starting ATLAS job with PandaID=6998370023
[2026-02-06 16:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 16:44:11]  *** The last 200 lines of the pilot log: ***
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | wrong length of table data, x=[1770424844.0], y=[1317.0] (must be same and length>=4)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . Timing measurements:
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . get job = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . initial setup = 28 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload setup = 20 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-in = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload execution = 51 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-out = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . log creation = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:44:11] 2026-02-07 00:43:20,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998370023/pilotlog.txt
[2026-02-06 16:44:11] 2026-02-07 00:43:20,388 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 16:44:11] - Log from pilotlog.txt -
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6998370023/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | extracted standard info from prmon json
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | wrong length of table data, x=[1770424844.0], y=[1317.0] (must be same and length>=4)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . Timing measurements:
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . get job = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . initial setup = 28 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload setup = 20 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-in = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload execution = 51 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-out = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . log creation = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:44:11] 2026-02-07 00:43:20,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998370023/pilotlog.txt
[2026-02-06 16:44:11] 2026-02-07 00:43:20,388 | WARNING  | 
[2026-02-06 16:44:11] [begin log extracts]
[2026-02-06 16:44:11] - Log from pilotlog.txt -
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6998370023/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | extracted standard info from prmon json
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:44:11] 2026-02-07 00:43:20,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:44:11] 2026-02-07 00:43:20,236 | WARNING  | wrong length of table data, x=[1770424844.0], y=[1317.0] (must be same and length>=4)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | could have reported an average CPU frequency of 2727 MHz (4 samples)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . Timing measurements:
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . get job = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . initial setup = 28 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload setup = 20 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-in = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . payload execution = 51 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . stage-out = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | . log creation = 0 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | ..............................
[2026-02-06 16:44:11] 2026-02-07 00:43:20,247 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:44:11] 2026-02-07 00:43:20,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998370023/pilotlog.txt
[2026-02-06 16:44:11] [end log extracts]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,388 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,389 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | 
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | job summary report
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | --------------------------------------------------
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | PanDA job id: 6998370023
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | task id: 48508763
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 16:41:11,543 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | pilot state: failed 
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | transexitcode: 65
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | exeerrorcode: 65
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | exitcode: 65
[2026-02-06 16:44:11] 2026-02-07 00:43:20,733 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | nevents: 0
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | neventsw: 0
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | pid: 573409
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | pgrp: 573409
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | corecount: 12
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | event service: False
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | sizes: {0: 2283117, 1: 2283117, 76: 2306286, 78: 2310694, 195: 2310832}
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | --------------------------------------------------
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | 
[2026-02-06 16:44:11] 2026-02-07 00:43:20,734 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 16:44:11] 2026-02-07 00:43:20,827 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,827 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 16:44:11] 2026-02-07 00:43:20,828 | INFO     | job 6998370023 has completed (purged errors)
[2026-02-06 16:44:11] 2026-02-07 00:43:20,829 | INFO     | overall cleanup function is called
[2026-02-06 16:44:11] 2026-02-07 00:43:21,837 | INFO     | --- collectZombieJob: --- 10, [573409]
[2026-02-06 16:44:11] 2026-02-07 00:43:21,837 | INFO     | zombie collector waiting for pid 573409
[2026-02-06 16:44:11] 2026-02-07 00:43:21,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 16:44:11] 2026-02-07 00:43:21,837 | INFO     | collected zombie processes
[2026-02-06 16:44:11] 2026-02-07 00:43:21,837 | INFO     | will attempt to kill all subprocesses of pid=573409
[2026-02-06 16:44:11] 2026-02-07 00:43:22,713 | INFO     | process IDs to be killed: [573409] (in reverse order)
[2026-02-06 16:44:11] 2026-02-07 00:43:23,256 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 16:44:11] 2026-02-07 00:43:23,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 16:44:11] 2026-02-07 00:43:23,283 | INFO     | did not find any defunct processes belonging to 573409
[2026-02-06 16:44:11] 2026-02-07 00:43:23,332 | INFO     | did not find any defunct processes belonging to 573409
[2026-02-06 16:44:11] 2026-02-07 00:43:23,332 | INFO     | ready for new job
[2026-02-06 16:44:11] 2026-02-07 00:43:23,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 16:44:11] 2026-02-07 00:43:23,333 | INFO     | **************************************
[2026-02-06 16:44:11] 2026-02-07 00:43:23,334 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 16:44:11] 2026-02-07 00:43:23,334 | INFO     | **************************************
[2026-02-06 16:44:11] 2026-02-07 00:43:23,334 | INFO     | 
[2026-02-06 16:44:11] 2026-02-07 00:43:23,335 | INFO     | architecture information:
[2026-02-06 16:44:11] 2026-02-07 00:43:23,352 | INFO     | executing command: cat /etc/os-release
[2026-02-06 16:44:11] 2026-02-07 00:43:23,406 | INFO     | cat /etc/os-release:
[2026-02-06 16:44:11] NAME="CentOS Linux"
[2026-02-06 16:44:11] VERSION="7 (Core)"
[2026-02-06 16:44:11] ID="centos"
[2026-02-06 16:44:11] ID_LIKE="rhel fedora"
[2026-02-06 16:44:11] VERSION_ID="7"
[2026-02-06 16:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 16:44:11] ANSI_COLOR="0;31"
[2026-02-06 16:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 16:44:11] HOME_URL="https://www.centos.org/"
[2026-02-06 16:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 16:44:11] 
[2026-02-06 16:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 16:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 16:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 16:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 16:44:11] 
[2026-02-06 16:44:11] 2026-02-07 00:43:23,406 | INFO     | **************************************
[2026-02-06 16:44:11] 2026-02-07 00:43:23,910 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 16:44:11] 2026-02-07 00:43:23,944 | INFO     | sufficient remaining disk space (2143952044032 B)
[2026-02-06 16:44:11] 2026-02-07 00:43:23,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 16:44:11] 2026-02-07 00:43:23,945 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 16:44:11] 2026-02-07 00:43:23,945 | INFO     | update_server=False
[2026-02-06 16:44:11] 2026-02-07 00:43:23,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 16:44:11] 2026-02-07 00:43:23,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:44:11] 2026-02-07 00:43:23,945 | INFO     | aborting loop
[2026-02-06 16:44:11] 2026-02-07 00:43:24,690 | INFO     | all job control threads have been joined
[2026-02-06 16:44:11] 2026-02-07 00:43:24,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 16:44:11] 2026-02-07 00:43:24,951 | INFO     | [job] retrieve thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:24,951 | INFO     | [job] job monitor thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:24,995 | INFO     | all data control threads have been joined
[2026-02-06 16:44:11] 2026-02-07 00:43:25,026 | INFO     | all payload control threads have been joined
[2026-02-06 16:44:11] 2026-02-07 00:43:25,306 | INFO     | [payload] failed_post thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,365 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,440 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,480 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,554 | INFO     | [data] copytool_in thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,696 | INFO     | [job] control thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:25,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:44:11] 2026-02-07 00:43:26,001 | INFO     | [data] control thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,032 | INFO     | [payload] control thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,240 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,266 | INFO     | [job] validate thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,369 | INFO     | [payload] validate_post thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,747 | INFO     | [job] queue monitor thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:26,818 | INFO     | [data] copytool_out thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:27,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 16:44:11] 2026-02-07 00:43:31,166 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 16:44:11] 2026-02-07 00:43:54,156 | INFO     | PID=567433 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 16:44:11] 2026-02-07 00:43:54,156 | INFO     | .. there are 42 such processes running
[2026-02-06 16:44:11] 2026-02-07 00:43:54,157 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 16:44:11] 2026-02-07 00:43:54,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 16:44:11] 2026-02-07 00:43:54,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 16:44:11] 2026-02-07 00:44:04,220 | INFO     | [monitor] cgroup control has ended
[2026-02-06 16:44:11] 2026-02-07 00:44:05,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677139285824)>', '<ExcThread(monitor, started 140676595435264)>']
[2026-02-06 16:44:11] 2026-02-07 00:44:06,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 16:44:11] 2026-02-07 00:44:06,228 | INFO     | [monitor] control thread has ended
[2026-02-06 16:44:11] 2026-02-07 00:44:10,252 | INFO     | all workflow threads have been joined
[2026-02-06 16:44:11] 2026-02-07 00:44:10,252 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 16:44:11] 2026-02-07 00:44:10,252 | INFO     | traces error code: 0
[2026-02-06 16:44:11] 2026-02-07 00:44:10,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 16:44:11] 2026-02-07 00:44:10,598 [wrapper] ==== pilot stdout END ====
[2026-02-06 16:44:11] 2026-02-07 00:44:10,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 16:44:11] 2026-02-07 00:44:10,663 [wrapper] pilotpid: 567433
[2026-02-06 16:44:11] 2026-02-07 00:44:10,690 [wrapper] Pilot exit status: 0
[2026-02-06 16:44:11] 2026-02-07 00:44:10,856 [wrapper] pandaids: 6998370023
[2026-02-06 16:44:11] 2026-02-07 00:44:11,173 [wrapper] cleanup supervisor_pilot  567439 567434
[2026-02-06 16:44:11] 2026-02-07 00:44:11,198 [wrapper] Test setup, not cleaning
[2026-02-06 16:44:11] 2026-02-07 00:44:11,240 [wrapper] apfmon messages muted
[2026-02-06 16:44:11] 2026-02-07 00:44:11,268 [wrapper] ==== wrapper stdout END ====
[2026-02-06 16:44:11] 2026-02-07 00:44:11,281 [wrapper] ==== wrapper stderr END ====
[2026-02-06 16:44:11]  *** Error codes and diagnostics ***
[2026-02-06 16:44:11]     "exeErrorCode": 65,
[2026-02-06 16:44:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:44:11]     "pilotErrorCode": 1305,
[2026-02-06 16:44:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:44:11]  *** Listing of results directory ***
[2026-02-06 16:44:11] total 662776
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc    584627 Feb  6 10:42 pilot3.tar.gz
[2026-02-06 16:44:11] -rwx------. 1 boinc boinc     36322 Feb  6 10:45 runpilot2-wrapper.sh
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc      5111 Feb  6 10:48 queuedata.json
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc       100 Feb  6 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 16:44:11] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 16:39 run_atlas
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc       105 Feb  6 16:39 job.xml
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc      6593 Feb  6 16:39 init_data.xml
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc 674536251 Feb  6 16:39 EVNT.48508760._000012.pool.root.1
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:39 start_atlas.sh
[2026-02-06 16:44:11] drwxrwx--x. 2 boinc boinc      4096 Feb  6 16:39 shared
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc    597942 Feb  6 16:39 input.tar.gz
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc         0 Feb  6 16:39 boinc_lockfile
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc      2545 Feb  6 16:39 pandaJob.out
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc   1009520 Feb  6 16:39 agis_schedconf.cvmfs.json
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc   1513088 Feb  6 16:39 agis_ddmendpoints.agis.ALL.json
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc       444 Feb  6 16:40 workernode_map.json
[2026-02-06 16:44:11] drwx------. 5 boinc boinc      4096 Feb  6 16:40 pilot3
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc       970 Feb  6 16:41 memory_monitor_summary.json
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc     21566 Feb  6 16:41 log.48508763._000549.job.log.tgz.1
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc      7028 Feb  6 16:43 heartbeat.json
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc        95 Feb  6 16:43 pilot_heartbeat.json
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc        22 Feb  6 16:44 wrapper_checkpoint.txt
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc      8192 Feb  6 16:44 boinc_mmap_file
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc       524 Feb  6 16:44 boinc_task_state.xml
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc      4818 Feb  6 16:44 pilotlog.txt
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc     85509 Feb  6 16:44 log.48508763._000549.job.log.1
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc       188 Feb  6 16:44 output.list
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc       620 Feb  6 16:44 runtime_log
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc    122880 Feb  6 16:44 result.tar.gz
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc      8635 Feb  6 16:44 runtime_log.err
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc       643 Feb  6 16:44 l9FNDmt0f88n9Rq4apOajLDm4fhM0noT9bVooX4SDmGLZKDm8kLH6n.diag
[2026-02-06 16:44:11] -rw-r--r--. 1 boinc boinc     21683 Feb  6 16:44 stderr.txt
[2026-02-06 16:44:11] No HITS result produced
[2026-02-06 16:44:11]  *** Contents of shared directory: ***
[2026-02-06 16:44:11] total 659452
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc 674536251 Feb  6 16:39 ATLAS.root_0
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:39 start_atlas.sh
[2026-02-06 16:44:11] -rw-r--r--. 2 boinc boinc    597942 Feb  6 16:39 input.tar.gz
[2026-02-06 16:44:11] -rw-------. 1 boinc boinc    122880 Feb  6 16:44 result.tar.gz
16:44:13 (563703): run_atlas exited; CPU time 21.723678
16:44:13 (563703): called boinc_finish(0)

</stderr_txt>
]]>

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