Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:33:18 (2158525): wrapper (7.7.26015): starting
16:33:18 (2158525): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 16:33:18] Arguments: --nthreads 12
[2026-02-06 16:33:18] Threads: 12
[2026-02-06 16:33:18] Checking for CVMFS
[2026-02-06 16:33:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 16:33:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 16:33:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 16:33:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 16:33:19] 2.11.5.0 3857663 97611 230092 155965 2 378 43712826 45568000 22011 130560 0 508716792 99.786 332248607 17075 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 16:33:19] CVMFS is ok
[2026-02-06 16:33:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 16:33:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 16:33:19] Further information can be found at the LHC@home message board.
[2026-02-06 16:33:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 16:33:19] Checking for apptainer binary...
[2026-02-06 16:33:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 16:33:19] Running /usr/bin/apptainer --version
[2026-02-06 16:33:19] apptainer version 1.4.1-1.el9
[2026-02-06 16:33:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 16:33:21] wns0075.triumf.lcg
[2026-02-06 16:33:21] apptainer works
[2026-02-06 16:33:21] Set ATHENA_PROC_NUMBER=12
[2026-02-06 16:33:21] Set ATHENA_CORE_NUMBER=12
[2026-02-06 16:33:21] Starting ATLAS job with PandaID=6998369959
[2026-02-06 16:33:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 16:40:10]  *** The last 200 lines of the pilot log: ***
[2026-02-06 16:40:10] 2026-02-07 00:39:31,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:40:10] 2026-02-07 00:39:31,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | WARNING  | wrong length of table data, x=[1770424577.0, 1770424638.0], y=[3066.0, 616579.0] (must be same and length>=4)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | INFO     | could have reported an average CPU frequency of 1351 MHz (4 samples)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . Timing measurements:
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . get job = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . initial setup = 39 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload setup = 33 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-in = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload execution = 105 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-out = 1 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . log creation = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998369959/pilotlog.txt
[2026-02-06 16:40:10] 2026-02-07 00:39:31,975 | INFO     | time since job start (268s) is within the limit (349056.0s)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,999 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 16:40:10] - Log from pilotlog.txt -
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | INFO     | extracted standard info from prmon json
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:40:10] 2026-02-07 00:39:31,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:40:10] 2026-02-07 00:39:31,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | WARNING  | wrong length of table data, x=[1770424577.0, 1770424638.0], y=[3066.0, 616579.0] (must be same and length>=4)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | INFO     | could have reported an average CPU frequency of 1351 MHz (4 samples)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . Timing measurements:
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . get job = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . initial setup = 39 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload setup = 33 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-in = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload execution = 105 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-out = 1 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . log creation = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998369959/pilotlog.txt
[2026-02-06 16:40:10] 2026-02-07 00:39:31,975 | INFO     | time since job start (268s) is within the limit (349056.0s)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,000 | WARNING  | 
[2026-02-06 16:40:10] [begin log extracts]
[2026-02-06 16:40:10] - Log from pilotlog.txt -
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | INFO     | extracted standard info from prmon json
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:40:10] 2026-02-07 00:39:31,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:40:10] 2026-02-07 00:39:31,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:40:10] 2026-02-07 00:39:31,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | WARNING  | wrong length of table data, x=[1770424577.0, 1770424638.0], y=[3066.0, 616579.0] (must be same and length>=4)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,932 | INFO     | could have reported an average CPU frequency of 1351 MHz (4 samples)
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . Timing measurements:
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . get job = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . initial setup = 39 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload setup = 33 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-in = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . payload execution = 105 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . stage-out = 1 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | . log creation = 0 s
[2026-02-06 16:40:10] 2026-02-07 00:39:31,933 | INFO     | ..............................
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:40:10] 2026-02-07 00:39:31,935 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998369959/pilotlog.txt
[2026-02-06 16:40:10] 2026-02-07 00:39:31,975 | INFO     | time since job start (268s) is within the limit (349056.0s)
[2026-02-06 16:40:10] [end log extracts]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,000 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,001 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 16:40:10] 2026-02-07 00:39:32,450 | INFO     | 
[2026-02-06 16:40:10] 2026-02-07 00:39:32,450 | INFO     | job summary report
[2026-02-06 16:40:10] 2026-02-07 00:39:32,450 | INFO     | --------------------------------------------------
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | PanDA job id: 6998369959
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | task id: 48508763
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 16:37:21,063 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | pilot state: failed 
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | transexitcode: 65
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | exeerrorcode: 65
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | exitcode: 65
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,451 | INFO     | cpuconsumptiontime: 25 s
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | nevents: 0
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | neventsw: 0
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | pid: 2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | pgrp: 2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | corecount: 12
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | event service: False
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | sizes: {0: 2282030, 1: 2282712, 2: 2283173, 3: 2283173, 143: 2306427, 144: 2306403, 145: 2310851, 148: 2310879, 265: 2311045}
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | --------------------------------------------------
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | 
[2026-02-06 16:40:10] 2026-02-07 00:39:32,452 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 16:40:10] 2026-02-07 00:39:32,790 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,790 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,790 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,790 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | job 6998369959 has completed (purged errors)
[2026-02-06 16:40:10] 2026-02-07 00:39:32,792 | INFO     | overall cleanup function is called
[2026-02-06 16:40:10] 2026-02-07 00:39:33,821 | INFO     | --- collectZombieJob: --- 10, [2167198]
[2026-02-06 16:40:10] 2026-02-07 00:39:33,821 | INFO     | zombie collector waiting for pid 2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:33,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 16:40:10] 2026-02-07 00:39:33,822 | INFO     | collected zombie processes
[2026-02-06 16:40:10] 2026-02-07 00:39:33,822 | INFO     | will attempt to kill all subprocesses of pid=2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:35,230 | INFO     | process IDs to be killed: [2167198] (in reverse order)
[2026-02-06 16:40:10] 2026-02-07 00:39:35,519 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 16:40:10] 2026-02-07 00:39:35,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 16:40:10] 2026-02-07 00:39:35,580 | INFO     | did not find any defunct processes belonging to 2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:35,627 | INFO     | did not find any defunct processes belonging to 2167198
[2026-02-06 16:40:10] 2026-02-07 00:39:35,628 | INFO     | ready for new job
[2026-02-06 16:40:10] 2026-02-07 00:39:35,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 16:40:10] 2026-02-07 00:39:35,630 | INFO     | **************************************
[2026-02-06 16:40:10] 2026-02-07 00:39:35,641 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 16:40:10] 2026-02-07 00:39:35,641 | INFO     | **************************************
[2026-02-06 16:40:10] 2026-02-07 00:39:35,641 | INFO     | 
[2026-02-06 16:40:10] 2026-02-07 00:39:35,645 | INFO     | architecture information:
[2026-02-06 16:40:10] 2026-02-07 00:39:35,661 | INFO     | executing command: cat /etc/os-release
[2026-02-06 16:40:10] 2026-02-07 00:39:35,749 | INFO     | cat /etc/os-release:
[2026-02-06 16:40:10] NAME="CentOS Linux"
[2026-02-06 16:40:10] VERSION="7 (Core)"
[2026-02-06 16:40:10] ID="centos"
[2026-02-06 16:40:10] ID_LIKE="rhel fedora"
[2026-02-06 16:40:10] VERSION_ID="7"
[2026-02-06 16:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 16:40:10] ANSI_COLOR="0;31"
[2026-02-06 16:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 16:40:10] HOME_URL="https://www.centos.org/"
[2026-02-06 16:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 16:40:10] 
[2026-02-06 16:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 16:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 16:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 16:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 16:40:10] 
[2026-02-06 16:40:10] 2026-02-07 00:39:35,750 | INFO     | **************************************
[2026-02-06 16:40:10] 2026-02-07 00:39:36,253 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 16:40:10] 2026-02-07 00:39:36,278 | INFO     | sufficient remaining disk space (2112700284928 B)
[2026-02-06 16:40:10] 2026-02-07 00:39:36,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 16:40:10] 2026-02-07 00:39:36,279 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 16:40:10] 2026-02-07 00:39:36,279 | INFO     | update_server=False
[2026-02-06 16:40:10] 2026-02-07 00:39:36,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 16:40:10] 2026-02-07 00:39:36,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:40:10] 2026-02-07 00:39:36,283 | INFO     | aborting loop
[2026-02-06 16:40:10] 2026-02-07 00:39:36,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 16:40:10] 2026-02-07 00:39:36,287 | INFO     | all data control threads have been joined
[2026-02-06 16:40:10] 2026-02-07 00:39:37,220 | INFO     | all payload control threads have been joined
[2026-02-06 16:40:10] 2026-02-07 00:39:37,289 | INFO     | [job] retrieve thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,290 | INFO     | [job] job monitor thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,293 | INFO     | [data] control thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,377 | INFO     | [payload] failed_post thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:40:10] 2026-02-07 00:39:37,523 | INFO     | all job control threads have been joined
[2026-02-06 16:40:10] 2026-02-07 00:39:37,774 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,775 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:37,981 | INFO     | [payload] validate_post thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,037 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,226 | INFO     | [payload] control thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,290 | INFO     | [data] copytool_out thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,371 | INFO     | [data] copytool_in thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,472 | INFO     | [job] queue monitor thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,529 | INFO     | [job] control thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,667 | INFO     | [job] validate thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:39:38,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 16:40:10] 2026-02-07 00:39:42,973 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 16:40:10] 2026-02-07 00:40:03,224 | INFO     | [monitor] cgroup control has ended
[2026-02-06 16:40:10] 2026-02-07 00:40:03,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499258701632)>', '<ExcThread(monitor, started 140498413008640)>']
[2026-02-06 16:40:10] 2026-02-07 00:40:06,217 | INFO     | PID=2162445 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | INFO     | .. there are 34 such processes running
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 16:40:10] 2026-02-07 00:40:06,218 | INFO     | [monitor] control thread has ended
[2026-02-06 16:40:10] 2026-02-07 00:40:08,879 | INFO     | all workflow threads have been joined
[2026-02-06 16:40:10] 2026-02-07 00:40:08,879 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 16:40:10] 2026-02-07 00:40:08,880 | INFO     | traces error code: 0
[2026-02-06 16:40:10] 2026-02-07 00:40:08,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 16:40:10] 2026-02-07 00:40:09,576 [wrapper] ==== pilot stdout END ====
[2026-02-06 16:40:10] 2026-02-07 00:40:09,614 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 16:40:10] 2026-02-07 00:40:09,642 [wrapper] pilotpid: 2162445
[2026-02-06 16:40:10] 2026-02-07 00:40:09,689 [wrapper] Pilot exit status: 0
[2026-02-06 16:40:10] 2026-02-07 00:40:09,900 [wrapper] pandaids: 6998369959
[2026-02-06 16:40:10] 2026-02-07 00:40:10,427 [wrapper] cleanup supervisor_pilot 2162451 2162446
[2026-02-06 16:40:10] 2026-02-07 00:40:10,437 [wrapper] Test setup, not cleaning
[2026-02-06 16:40:10] 2026-02-07 00:40:10,441 [wrapper] apfmon messages muted
[2026-02-06 16:40:10] 2026-02-07 00:40:10,453 [wrapper] ==== wrapper stdout END ====
[2026-02-06 16:40:10] 2026-02-07 00:40:10,466 [wrapper] ==== wrapper stderr END ====
[2026-02-06 16:40:10]  *** Error codes and diagnostics ***
[2026-02-06 16:40:10]     "exeErrorCode": 65,
[2026-02-06 16:40:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:40:10]     "pilotErrorCode": 1305,
[2026-02-06 16:40:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:40:10]  *** Listing of results directory ***
[2026-02-06 16:40:10] total 664204
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc    584627 Feb  6 10:42 pilot3.tar.gz
[2026-02-06 16:40:10] -rwx------. 1 boinc boinc     36322 Feb  6 10:45 runpilot2-wrapper.sh
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc      5111 Feb  6 10:48 queuedata.json
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc       100 Feb  6 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 16:40:10] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 16:33 run_atlas
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc       105 Feb  6 16:33 job.xml
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc 675975559 Feb  6 16:33 EVNT.48508760._000011.pool.root.1
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc      6593 Feb  6 16:33 init_data.xml
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:33 start_atlas.sh
[2026-02-06 16:40:10] drwxrwx--x. 2 boinc boinc      4096 Feb  6 16:33 shared
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc    597942 Feb  6 16:33 input.tar.gz
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc         0 Feb  6 16:33 boinc_lockfile
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc      2545 Feb  6 16:33 pandaJob.out
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc   1009520 Feb  6 16:34 agis_schedconf.cvmfs.json
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc   1513088 Feb  6 16:34 agis_ddmendpoints.agis.ALL.json
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc       445 Feb  6 16:35 workernode_map.json
[2026-02-06 16:40:10] drwx------. 5 boinc boinc      4096 Feb  6 16:35 pilot3
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc       525 Feb  6 16:37 boinc_task_state.xml
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc      1006 Feb  6 16:37 memory_monitor_summary.json
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc     22508 Feb  6 16:37 log.48508763._000485.job.log.tgz.1
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc        95 Feb  6 16:39 pilot_heartbeat.json
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc      7047 Feb  6 16:39 heartbeat.json
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc        23 Feb  6 16:40 wrapper_checkpoint.txt
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc      4819 Feb  6 16:40 pilotlog.txt
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc     91862 Feb  6 16:40 log.48508763._000485.job.log.1
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc       188 Feb  6 16:40 output.list
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc       620 Feb  6 16:40 runtime_log
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc    133120 Feb  6 16:40 result.tar.gz
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc       643 Feb  6 16:40 V35KDmk0f88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmphZKDmXSpvom.diag
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc      8635 Feb  6 16:40 runtime_log.err
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc      8192 Feb  6 16:40 boinc_mmap_file
[2026-02-06 16:40:10] -rw-r--r--. 1 boinc boinc     21822 Feb  6 16:40 stderr.txt
[2026-02-06 16:40:10] No HITS result produced
[2026-02-06 16:40:10]  *** Contents of shared directory: ***
[2026-02-06 16:40:10] total 660872
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc 675975559 Feb  6 16:33 ATLAS.root_0
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:33 start_atlas.sh
[2026-02-06 16:40:10] -rw-r--r--. 2 boinc boinc    597942 Feb  6 16:33 input.tar.gz
[2026-02-06 16:40:10] -rw-------. 1 boinc boinc    133120 Feb  6 16:40 result.tar.gz
16:40:12 (2158525): run_atlas exited; CPU time 38.317871
16:40:12 (2158525): called boinc_finish(0)

</stderr_txt>
]]>

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