Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:07:36 (1106221): wrapper (7.7.26015): starting
16:07:36 (1106221): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 16:07:36] Arguments: --nthreads 12
[2026-02-06 16:07:36] Threads: 12
[2026-02-06 16:07:36] Checking for CVMFS
[2026-02-06 16:07:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 16:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 16:07:36] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 16:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 16:07:36] 2.11.5.0 2097640 132470 235796 155964 0 402 29164116 45568001 19063 130560 0 1124730822 99.797 683488354 19954 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 16:07:36] CVMFS is ok
[2026-02-06 16:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 16:07:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 16:07:36] Further information can be found at the LHC@home message board.
[2026-02-06 16:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 16:07:36] Checking for apptainer binary...
[2026-02-06 16:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 16:07:36] Running /usr/bin/apptainer --version
[2026-02-06 16:07:36] apptainer version 1.4.1-1.el9
[2026-02-06 16:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 16:07:36] wns0049.triumf.lcg
[2026-02-06 16:07:36] apptainer works
[2026-02-06 16:07:37] Set ATHENA_PROC_NUMBER=12
[2026-02-06 16:07:37] Set ATHENA_CORE_NUMBER=12
[2026-02-06 16:07:37] Starting ATLAS job with PandaID=6998349656
[2026-02-06 16:07:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 16:10:58]  *** The last 200 lines of the pilot log: ***
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | wrong length of table data, x=[1770422891.0], y=[1038.0] (must be same and length>=4)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | could have reported an average CPU frequency of 2750 MHz (4 samples)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . Timing measurements:
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . get job = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . initial setup = 6 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload setup = 4 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-in = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload execution = 16 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-out = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . log creation = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998349656/pilotlog.txt
[2026-02-06 16:10:58] 2026-02-07 00:10:24,942 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 16:10:58] - Log from pilotlog.txt -
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | found no stored workdir sizes
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | wrong length of table data, x=[1770422891.0], y=[1038.0] (must be same and length>=4)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | could have reported an average CPU frequency of 2750 MHz (4 samples)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . Timing measurements:
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . get job = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . initial setup = 6 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload setup = 4 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-in = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload execution = 16 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-out = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . log creation = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998349656/pilotlog.txt
[2026-02-06 16:10:58] 2026-02-07 00:10:24,942 | WARNING  | 
[2026-02-06 16:10:58] [begin log extracts]
[2026-02-06 16:10:58] - Log from pilotlog.txt -
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:10:58] 2026-02-07 00:10:24,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | found no stored workdir sizes
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | WARNING  | wrong length of table data, x=[1770422891.0], y=[1038.0] (must be same and length>=4)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | could have reported an average CPU frequency of 2750 MHz (4 samples)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,926 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . Timing measurements:
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . get job = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . initial setup = 6 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload setup = 4 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-in = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . payload execution = 16 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . stage-out = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | . log creation = 0 s
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | ..............................
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 16:10:58] 2026-02-07 00:10:24,927 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6998349656/pilotlog.txt
[2026-02-06 16:10:58] [end log extracts]
[2026-02-06 16:10:58] 2026-02-07 00:10:24,942 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 16:10:58] 2026-02-07 00:10:24,943 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 16:10:58] 2026-02-07 00:10:25,359 | INFO     | 
[2026-02-06 16:10:58] 2026-02-07 00:10:25,359 | INFO     | job summary report
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | --------------------------------------------------
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | PanDA job id: 6998349656
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | task id: 48318026
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 16:08:18,500 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | pilot state: failed 
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | transexitcode: 65
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | exeerrorcode: 65
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | exitcode: 65
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | nevents: 0
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | neventsw: 0
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | pid: 1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | pgrp: 1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | corecount: 12
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | event service: False
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | sizes: {0: 2281993, 1: 2283108, 11: 2283108, 25: 2306498, 26: 2310790, 27: 2310818, 144: 2311112}
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | --------------------------------------------------
[2026-02-06 16:10:58] 2026-02-07 00:10:25,360 | INFO     | 
[2026-02-06 16:10:58] 2026-02-07 00:10:25,361 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 16:10:58] 2026-02-07 00:10:25,381 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,383 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 16:10:58] 2026-02-07 00:10:25,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,383 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 16:10:58] 2026-02-07 00:10:25,383 | INFO     | job 6998349656 has completed (purged errors)
[2026-02-06 16:10:58] 2026-02-07 00:10:25,383 | INFO     | overall cleanup function is called
[2026-02-06 16:10:58] 2026-02-07 00:10:26,154 | INFO     | PID=1109950 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 16:10:58] 2026-02-07 00:10:26,154 | INFO     | .. there are 35 such processes running
[2026-02-06 16:10:58] 2026-02-07 00:10:26,388 | INFO     | --- collectZombieJob: --- 10, [1114515]
[2026-02-06 16:10:58] 2026-02-07 00:10:26,388 | INFO     | zombie collector waiting for pid 1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:26,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 16:10:58] 2026-02-07 00:10:26,389 | INFO     | collected zombie processes
[2026-02-06 16:10:58] 2026-02-07 00:10:26,389 | INFO     | will attempt to kill all subprocesses of pid=1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:26,581 | INFO     | process IDs to be killed: [1114515] (in reverse order)
[2026-02-06 16:10:58] 2026-02-07 00:10:26,658 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 16:10:58] 2026-02-07 00:10:26,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 16:10:58] 2026-02-07 00:10:26,667 | INFO     | did not find any defunct processes belonging to 1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:26,676 | INFO     | did not find any defunct processes belonging to 1114515
[2026-02-06 16:10:58] 2026-02-07 00:10:26,676 | INFO     | ready for new job
[2026-02-06 16:10:58] 2026-02-07 00:10:26,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 16:10:58] 2026-02-07 00:10:26,678 | INFO     | **************************************
[2026-02-06 16:10:58] 2026-02-07 00:10:26,678 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 16:10:58] 2026-02-07 00:10:26,678 | INFO     | **************************************
[2026-02-06 16:10:58] 2026-02-07 00:10:26,678 | INFO     | 
[2026-02-06 16:10:58] 2026-02-07 00:10:26,680 | INFO     | architecture information:
[2026-02-06 16:10:58] 2026-02-07 00:10:26,680 | INFO     | executing command: cat /etc/os-release
[2026-02-06 16:10:58] 2026-02-07 00:10:26,691 | INFO     | cat /etc/os-release:
[2026-02-06 16:10:58] NAME="CentOS Linux"
[2026-02-06 16:10:58] VERSION="7 (Core)"
[2026-02-06 16:10:58] ID="centos"
[2026-02-06 16:10:58] ID_LIKE="rhel fedora"
[2026-02-06 16:10:58] VERSION_ID="7"
[2026-02-06 16:10:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 16:10:58] ANSI_COLOR="0;31"
[2026-02-06 16:10:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 16:10:58] HOME_URL="https://www.centos.org/"
[2026-02-06 16:10:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 16:10:58] 
[2026-02-06 16:10:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 16:10:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 16:10:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 16:10:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 16:10:58] 
[2026-02-06 16:10:58] 2026-02-07 00:10:26,691 | INFO     | **************************************
[2026-02-06 16:10:58] 2026-02-07 00:10:27,194 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 16:10:58] 2026-02-07 00:10:27,207 | INFO     | sufficient remaining disk space (2182168444928 B)
[2026-02-06 16:10:58] 2026-02-07 00:10:27,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 16:10:58] 2026-02-07 00:10:27,208 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 16:10:58] 2026-02-07 00:10:27,208 | INFO     | update_server=False
[2026-02-06 16:10:58] 2026-02-07 00:10:27,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 16:10:58] 2026-02-07 00:10:27,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 16:10:58] 2026-02-07 00:10:27,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:10:58] 2026-02-07 00:10:27,209 | INFO     | aborting loop
[2026-02-06 16:10:58] 2026-02-07 00:10:27,225 | INFO     | all job control threads have been joined
[2026-02-06 16:10:58] 2026-02-07 00:10:27,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 16:10:58] 2026-02-07 00:10:28,112 | INFO     | all data control threads have been joined
[2026-02-06 16:10:58] 2026-02-07 00:10:28,213 | INFO     | [job] retrieve thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:28,213 | INFO     | [job] job monitor thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:28,227 | INFO     | [job] control thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:28,282 | INFO     | all payload control threads have been joined
[2026-02-06 16:10:58] 2026-02-07 00:10:28,282 | INFO     | [data] copytool_in thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:28,522 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:28,706 | INFO     | [payload] failed_post thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,117 | INFO     | [data] control thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,287 | INFO     | [payload] control thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,374 | INFO     | [job] validate thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,416 | INFO     | [data] copytool_out thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,546 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,632 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,701 | INFO     | [payload] validate_post thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:29,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:30,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:10:58] 2026-02-07 00:10:31,022 | INFO     | [job] queue monitor thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:31,216 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 16:10:58] 2026-02-07 00:10:50,182 | INFO     | [monitor] cgroup control has ended
[2026-02-06 16:10:58] 2026-02-07 00:10:51,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647771084608)>', '<ExcThread(monitor, started 139646969313024)>']
[2026-02-06 16:10:58] 2026-02-07 00:10:56,642 | INFO     | all workflow threads have been joined
[2026-02-06 16:10:58] 2026-02-07 00:10:56,642 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 16:10:58] 2026-02-07 00:10:56,643 | INFO     | traces error code: 0
[2026-02-06 16:10:58] 2026-02-07 00:10:56,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 16:10:58] 2026-02-07 00:10:58,429 | INFO     | PID=1109950 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 16:10:58] 2026-02-07 00:10:58,430 | INFO     | .. there are 34 such processes running
[2026-02-06 16:10:58] 2026-02-07 00:10:58,430 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 16:10:58] 2026-02-07 00:10:58,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 16:10:58] 2026-02-07 00:10:58,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 16:10:58] 2026-02-07 00:10:58,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 16:10:58] 2026-02-07 00:10:58,431 | INFO     | [monitor] control thread has ended
[2026-02-06 16:10:58] 2026-02-07 00:10:58,554 [wrapper] ==== pilot stdout END ====
[2026-02-06 16:10:58] 2026-02-07 00:10:58,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 16:10:58] 2026-02-07 00:10:58,558 [wrapper] pilotpid: 1109950
[2026-02-06 16:10:58] 2026-02-07 00:10:58,560 [wrapper] Pilot exit status: 0
[2026-02-06 16:10:58] 2026-02-07 00:10:58,568 [wrapper] pandaids: 6998349656
[2026-02-06 16:10:58] 2026-02-07 00:10:58,617 [wrapper] cleanup supervisor_pilot 1109956 1109951
[2026-02-06 16:10:58] 2026-02-07 00:10:58,619 [wrapper] Test setup, not cleaning
[2026-02-06 16:10:58] 2026-02-07 00:10:58,621 [wrapper] apfmon messages muted
[2026-02-06 16:10:58] 2026-02-07 00:10:58,624 [wrapper] ==== wrapper stdout END ====
[2026-02-06 16:10:58] 2026-02-07 00:10:58,626 [wrapper] ==== wrapper stderr END ====
[2026-02-06 16:10:58]  *** Error codes and diagnostics ***
[2026-02-06 16:10:58]     "exeErrorCode": 65,
[2026-02-06 16:10:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:10:58]     "pilotErrorCode": 1305,
[2026-02-06 16:10:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 16:10:58]  *** Listing of results directory ***
[2026-02-06 16:10:58] total 528216
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc    584627 Feb  6 10:42 pilot3.tar.gz
[2026-02-06 16:10:58] -rwx------. 1 boinc boinc     36322 Feb  6 10:45 runpilot2-wrapper.sh
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc      5111 Feb  6 10:48 queuedata.json
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc       100 Feb  6 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 16:10:58] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 16:07 run_atlas
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc       105 Feb  6 16:07 job.xml
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc      6593 Feb  6 16:07 init_data.xml
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc 536752786 Feb  6 16:07 EVNT.48318024._000101.pool.root.1
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:07 start_atlas.sh
[2026-02-06 16:10:58] drwxrwx--x. 2 boinc boinc      4096 Feb  6 16:07 shared
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc    597963 Feb  6 16:07 input.tar.gz
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc         0 Feb  6 16:07 boinc_lockfile
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc      2526 Feb  6 16:07 pandaJob.out
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc   1009520 Feb  6 16:07 agis_schedconf.cvmfs.json
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc   1513088 Feb  6 16:07 agis_ddmendpoints.agis.ALL.json
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc       444 Feb  6 16:07 workernode_map.json
[2026-02-06 16:10:58] drwx------. 5 boinc boinc      4096 Feb  6 16:07 pilot3
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc       987 Feb  6 16:08 memory_monitor_summary.json
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc     21002 Feb  6 16:08 log.48318026._005041.job.log.tgz.1
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc      7035 Feb  6 16:10 heartbeat.json
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc       524 Feb  6 16:10 boinc_task_state.xml
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc      8192 Feb  6 16:10 boinc_mmap_file
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc        22 Feb  6 16:10 wrapper_checkpoint.txt
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc       823 Feb  6 16:10 pilotlog.txt
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc        95 Feb  6 16:10 pilot_heartbeat.json
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc     80680 Feb  6 16:10 log.48318026._005041.job.log.1
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc       188 Feb  6 16:10 output.list
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc       620 Feb  6 16:10 runtime_log
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc    122880 Feb  6 16:10 result.tar.gz
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc       645 Feb  6 16:10 U3LMDmW0f88n9Rq4apOajLDm4fhM0noT9bVooX4SDmUJZKDmyFwWWo.diag
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc      8635 Feb  6 16:10 runtime_log.err
[2026-02-06 16:10:58] -rw-r--r--. 1 boinc boinc     21766 Feb  6 16:10 stderr.txt
[2026-02-06 16:10:58] No HITS result produced
[2026-02-06 16:10:58]  *** Contents of shared directory: ***
[2026-02-06 16:10:58] total 524900
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc 536752786 Feb  6 16:07 ATLAS.root_0
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc     15845 Feb  6 16:07 start_atlas.sh
[2026-02-06 16:10:58] -rw-r--r--. 2 boinc boinc    597963 Feb  6 16:07 input.tar.gz
[2026-02-06 16:10:58] -rw-------. 1 boinc boinc    122880 Feb  6 16:10 result.tar.gz
16:10:59 (1106221): run_atlas exited; CPU time 17.775301
16:10:59 (1106221): called boinc_finish(0)

</stderr_txt>
]]>

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