Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:40 (83847): wrapper (7.7.26015): starting
12:43:40 (83847): wrapper: running run_atlas (--nthreads 3)
[2026-02-07 12:43:40] Arguments: --nthreads 3
[2026-02-07 12:43:40] Threads: 3
[2026-02-07 12:43:40] Checking for CVMFS
[2026-02-07 12:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 12:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 12:43:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 12:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 12:43:41] 2.9.2.0 4008882 1724 77444 155982 3 50 36026929 36864000 0 130560 0 761036 99.982 71420 6079 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 12:43:41] CVMFS is ok
[2026-02-07 12:43:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 12:43:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 12:43:41] Further information can be found at the LHC@home message board.
[2026-02-07 12:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 12:43:41] Checking for apptainer binary...
[2026-02-07 12:43:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 12:43:41] Running /usr/bin/apptainer --version
[2026-02-07 12:43:41] apptainer version 1.4.1-1.1
[2026-02-07 12:43:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 12:43:41] belleA263b
[2026-02-07 12:43:41] apptainer works
[2026-02-07 12:43:41] Set ATHENA_PROC_NUMBER=3
[2026-02-07 12:43:41] Set ATHENA_CORE_NUMBER=3
[2026-02-07 12:43:41] Starting ATLAS job with PandaID=6998348313
[2026-02-07 12:43:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 14:08:07]  *** The last 200 lines of the pilot log: ***
[2026-02-07 14:08:07]  guid=41d19ec0-f9ee-459a-b2e6-61543e5189c6
[2026-02-07 14:08:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 14:08:07]  is_altstaged=None
[2026-02-07 14:08:07]  is_tar=False
[2026-02-07 14:08:07]  lfn=log.48318034._010049.job.log.tgz.1
[2026-02-07 14:08:07]  mtime=0
[2026-02-07 14:08:07]  protocol_id=None
[2026-02-07 14:08:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 14:08:07]  replicas=None
[2026-02-07 14:08:07]  scope=mc23_13p6TeV
[2026-02-07 14:08:07]  status=None
[2026-02-07 14:08:07]  status_code=0
[2026-02-07 14:08:07]  storage_token=
[2026-02-07 14:08:07]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6998348313/log.48318034._010049.job.log.tgz.1
[2026-02-07 14:08:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/d6/log.48318034._010049.job.log.tgz.1
[2026-02-07 14:08:07]  workdir=None
[2026-02-07 14:08:07] ]
[2026-02-07 14:08:07] 2026-02-07 13:07:33,704 | INFO     | transferring file log.48318034._010049.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6998348313/log.48318034._010049.job.log.tgz.1 to /local/data/boinc/
[2026-02-07 14:08:07] 2026-02-07 13:07:33,704 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6998348313/log.48318034._010049.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0100
[2026-02-07 14:08:07] 2026-02-07 13:07:33,717 | INFO     | adding to output.list: log.48318034._010049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/d6/log.48318034._010049.job.log.tg
[2026-02-07 14:08:07] 2026-02-07 13:07:33,718 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 14:08:07] 2026-02-07 13:07:33,718 | INFO     | summary of transferred files:
[2026-02-07 14:08:07] 2026-02-07 13:07:33,718 | INFO     |  -- lfn=log.48318034._010049.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 14:08:07] 2026-02-07 13:07:33,718 | INFO     | stage-out finished correctly
[2026-02-07 14:08:07] 2026-02-07 13:07:34,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 14:08:07] 2026-02-07 13:07:34,428 | INFO     | time since job start (5023s) is within the limit (349056.0s)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,238 | INFO     | job 6998348313 has state=finished
[2026-02-07 14:08:07] 2026-02-07 13:07:36,238 | INFO     | preparing for final server update for job 6998348313 in state='finished'
[2026-02-07 14:08:07] 2026-02-07 13:07:36,238 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6998348313/jobReport.json
[2026-02-07 14:08:07] 2026-02-07 13:07:36,239 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-07 14:08:07] 2026-02-07 13:07:36,240 | INFO     | this job has now completed (state=finished)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,240 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,240 | INFO     | log transfer has been attempted: DONE
[2026-02-07 14:08:07] 2026-02-07 13:07:36,240 | INFO     | job 6998348313 has finished - writing final server update
[2026-02-07 14:08:07] 2026-02-07 13:07:36,240 | INFO     | total number of processed events: 400 (read)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,241 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6998348313/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,241 | INFO     | extracted standard info from prmon json
[2026-02-07 14:08:07] 2026-02-07 13:07:36,242 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 14:08:07] 2026-02-07 13:07:36,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 14:08:07] 2026-02-07 13:07:36,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 14:08:07] 2026-02-07 13:07:36,242 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | fitting pss+swap vs Time
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | sum of square deviations: 136095575.0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | sum of deviations: -9702132655.0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | mean x: 1770467240.5
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | mean y: 2421658.0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | intersect: 126217458617.59834
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | chi2: 0.1657713789967391
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | current memory leak: -71.29 B/s (using 76 data points, chi2=0.17)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,243 | INFO     | could have reported an average CPU frequency of 3887 MHz (6 samples)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | ..............................
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . Timing measurements:
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . get job = 0 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . initial setup = 3 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . payload setup = 3 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . stage-in = 0 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . payload execution = 5004 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . stage-out = 0 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | . log creation = 0 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,244 | INFO     | ..............................
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | 
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | job summary report
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | --------------------------------------------------
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | PanDA job id: 6998348313
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | task id: 48318034
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | errors: (none)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | pilot state: finished 
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | transexitcode: 0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | exeerrorcode: 0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | exeerrordiag: 
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | exitcode: 0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | exitmsg: OK
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | cpuconsumptiontime: 14380 s
[2026-02-07 14:08:07] 2026-02-07 13:07:36,273 | INFO     | nevents: 400
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | neventsw: 0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | pid: 92321
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | pgrp: 92321
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | corecount: 3
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | event service: False
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | sizes: {0: 2283055, 11: 2283055, 5011: 2318490, 5012: 2318490, 5014: 2318684}
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | --------------------------------------------------
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | 
[2026-02-07 14:08:07] 2026-02-07 13:07:36,274 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-07 14:08:07] 2026-02-07 13:07:36,287 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | job 6998348313 has completed (purged errors)
[2026-02-07 14:08:07] 2026-02-07 13:07:36,288 | INFO     | overall cleanup function is called
[2026-02-07 14:08:07] 2026-02-07 13:07:37,295 | INFO     | --- collectZombieJob: --- 10, [92321]
[2026-02-07 14:08:07] 2026-02-07 13:07:37,295 | INFO     | zombie collector waiting for pid 92321
[2026-02-07 14:08:07] 2026-02-07 13:07:37,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 14:08:07] 2026-02-07 13:07:37,295 | INFO     | collected zombie processes
[2026-02-07 14:08:07] 2026-02-07 13:07:37,295 | INFO     | will attempt to kill all subprocesses of pid=92321
[2026-02-07 14:08:07] 2026-02-07 13:07:37,342 | INFO     | process IDs to be killed: [92321] (in reverse order)
[2026-02-07 14:08:07] 2026-02-07 13:07:37,369 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 14:08:07] 2026-02-07 13:07:37,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 14:08:07] 2026-02-07 13:07:37,370 | INFO     | did not find any defunct processes belonging to 92321
[2026-02-07 14:08:07] 2026-02-07 13:07:37,372 | INFO     | did not find any defunct processes belonging to 92321
[2026-02-07 14:08:07] 2026-02-07 13:07:37,372 | INFO     | ready for new job
[2026-02-07 14:08:07] 2026-02-07 13:07:37,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 14:08:07] 2026-02-07 13:07:37,372 | INFO     | **************************************
[2026-02-07 14:08:07] 2026-02-07 13:07:37,373 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 14:08:07] 2026-02-07 13:07:37,373 | INFO     | **************************************
[2026-02-07 14:08:07] 2026-02-07 13:07:37,373 | INFO     | 
[2026-02-07 14:08:07] 2026-02-07 13:07:37,373 | INFO     | architecture information:
[2026-02-07 14:08:07] 2026-02-07 13:07:37,373 | INFO     | executing command: cat /etc/os-release
[2026-02-07 14:08:07] 2026-02-07 13:07:37,382 | INFO     | cat /etc/os-release:
[2026-02-07 14:08:07] NAME="CentOS Linux"
[2026-02-07 14:08:07] VERSION="7 (Core)"
[2026-02-07 14:08:07] ID="centos"
[2026-02-07 14:08:07] ID_LIKE="rhel fedora"
[2026-02-07 14:08:07] VERSION_ID="7"
[2026-02-07 14:08:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 14:08:07] ANSI_COLOR="0;31"
[2026-02-07 14:08:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 14:08:07] HOME_URL="https://www.centos.org/"
[2026-02-07 14:08:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 14:08:07] 
[2026-02-07 14:08:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 14:08:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 14:08:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 14:08:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 14:08:07] 
[2026-02-07 14:08:07] 2026-02-07 13:07:37,382 | INFO     | **************************************
[2026-02-07 14:08:07] 2026-02-07 13:07:37,886 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | INFO     | sufficient remaining disk space (364672712704 B)
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | INFO     | update_server=False
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 14:08:07] 2026-02-07 13:07:37,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 14:08:07] 2026-02-07 13:07:37,928 | INFO     | all job control threads have been joined
[2026-02-07 14:08:07] 2026-02-07 13:07:38,532 | INFO     | all data control threads have been joined
[2026-02-07 14:08:07] 2026-02-07 13:07:38,828 | INFO     | all payload control threads have been joined
[2026-02-07 14:08:07] 2026-02-07 13:07:38,905 | INFO     | [job] queue monitor thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:38,905 | INFO     | [job] retrieve thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:38,905 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:38,923 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:38,933 | INFO     | [job] control thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:38,999 | INFO     | [data] copytool_in thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:39,120 | WARNING  | process 92321 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 14:08:07] 2026-02-07 13:07:39,152 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 14:08:07] 2026-02-07 13:07:39,191 | INFO     | number of running child processes to parent process 92321: 1
[2026-02-07 14:08:07] 2026-02-07 13:07:39,192 | INFO     | maximum number of monitored processes: 6
[2026-02-07 14:08:07] 2026-02-07 13:07:39,192 | INFO     | aborting job monitoring since job object (job id=6998348313) has expired
[2026-02-07 14:08:07] 2026-02-07 13:07:39,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 14:08:07] 2026-02-07 13:07:39,192 | INFO     | will abort loop
[2026-02-07 14:08:07] 2026-02-07 13:07:39,250 | INFO     | [payload] validate_post thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:39,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 14:08:07] 2026-02-07 13:07:39,340 | INFO     | [payload] failed_post thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:39,538 | INFO     | [data] control thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:39,834 | INFO     | [payload] control thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:40,197 | INFO     | [job] job monitor thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:40,256 | INFO     | [job] validate thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:40,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 14:08:07] 2026-02-07 13:07:40,328 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:41,271 | INFO     | [data] copytool_out thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:44,267 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:47,971 | INFO     | job.realtimelogging is not enabled
[2026-02-07 14:08:07] 2026-02-07 13:07:48,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 14:08:07] 2026-02-07 13:07:57,228 | INFO     | [monitor] cgroup control has ended
[2026-02-07 14:08:07] 2026-02-07 13:07:58,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600723810112)>', '<ExcThread(monitor, started 140600233940736)>']
[2026-02-07 14:08:07] 2026-02-07 13:08:03,313 | INFO     | all workflow threads have been joined
[2026-02-07 14:08:07] 2026-02-07 13:08:03,313 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 14:08:07] 2026-02-07 13:08:03,313 | INFO     | traces error code: 0
[2026-02-07 14:08:07] 2026-02-07 13:08:03,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | INFO     | PID=87900 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 14:08:07] 2026-02-07 13:08:07,568 | INFO     | [monitor] control thread has ended
[2026-02-07 14:08:07] 2026-02-07 13:08:07,615 [wrapper] ==== pilot stdout END ====
[2026-02-07 14:08:07] 2026-02-07 13:08:07,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 14:08:07] 2026-02-07 13:08:07,620 [wrapper] pilotpid: 87900
[2026-02-07 14:08:07] 2026-02-07 13:08:07,622 [wrapper] Pilot exit status: 0
[2026-02-07 14:08:07] 2026-02-07 13:08:07,630 [wrapper] pandaids: 6998348313
[2026-02-07 14:08:07] 2026-02-07 13:08:07,647 [wrapper] cleanup supervisor_pilot   97450 87901
[2026-02-07 14:08:07] 2026-02-07 13:08:07,650 [wrapper] Test setup, not cleaning
[2026-02-07 14:08:07] 2026-02-07 13:08:07,652 [wrapper] apfmon messages muted
[2026-02-07 14:08:07] 2026-02-07 13:08:07,655 [wrapper] ==== wrapper stdout END ====
[2026-02-07 14:08:07] 2026-02-07 13:08:07,657 [wrapper] ==== wrapper stderr END ====
[2026-02-07 14:08:07]  *** Error codes and diagnostics ***
[2026-02-07 14:08:07]     "exeErrorCode": 0,
[2026-02-07 14:08:07]     "exeErrorDiag": "",
[2026-02-07 14:08:07]     "pilotErrorCode": 0,
[2026-02-07 14:08:07]     "pilotErrorDiag": "",
[2026-02-07 14:08:07]  *** Listing of results directory ***
[2026-02-07 14:08:07] total 676332
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc    584627 Feb  6 19:42 pilot3.tar.gz
[2026-02-07 14:08:07] -rwx------ 1 boinc boinc     36322 Feb  6 19:45 runpilot2-wrapper.sh
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc      5111 Feb  6 19:48 queuedata.json
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc       100 Feb  7 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 14:08:07] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 12:43 run_atlas
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc       105 Feb  7 12:43 job.xml
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc 498194437 Feb  7 12:43 EVNT.48318032._000191.pool.root.1
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc    597963 Feb  7 12:43 input.tar.gz
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc     15845 Feb  7 12:43 start_atlas.sh
[2026-02-07 14:08:07] drwxrwx--x 2 boinc boinc      4096 Feb  7 12:43 shared
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc         0 Feb  7 12:43 boinc_setup_complete
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc      6449 Feb  7 12:43 init_data.xml
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc         0 Feb  7 12:43 boinc_lockfile
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc      2536 Feb  7 12:43 pandaJob.out
[2026-02-07 14:08:07] -rw------- 1 boinc boinc   1009494 Feb  7 12:43 agis_schedconf.cvmfs.json
[2026-02-07 14:08:07] -rw------- 1 boinc boinc   1513088 Feb  7 12:43 agis_ddmendpoints.agis.ALL.json
[2026-02-07 14:08:07] -rw------- 1 boinc boinc       427 Feb  7 12:43 workernode_map.json
[2026-02-07 14:08:07] drwx------ 5 boinc boinc      4096 Feb  7 12:43 pilot3
[2026-02-07 14:08:07] -rw------- 1 boinc boinc        95 Feb  7 14:07 pilot_heartbeat.json
[2026-02-07 14:08:07] -rw------- 1 boinc boinc 188393486 Feb  7 14:07 HITS.48318034._010049.pool.root.1
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc       530 Feb  7 14:07 boinc_task_state.xml
[2026-02-07 14:08:07] -rw------- 1 boinc boinc      1021 Feb  7 14:07 memory_monitor_summary.json
[2026-02-07 14:08:07] -rw------- 1 boinc boinc    284239 Feb  7 14:07 log.48318034._010049.job.log.tgz.1
[2026-02-07 14:08:07] -rw------- 1 boinc boinc      6314 Feb  7 14:07 heartbeat.json
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc        27 Feb  7 14:07 wrapper_checkpoint.txt
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc      8192 Feb  7 14:07 boinc_mmap_file
[2026-02-07 14:08:07] -rw------- 1 boinc boinc       745 Feb  7 14:08 pilotlog.txt
[2026-02-07 14:08:07] -rw------- 1 boinc boinc    733237 Feb  7 14:08 log.48318034._010049.job.log.1
[2026-02-07 14:08:07] -rw------- 1 boinc boinc       357 Feb  7 14:08 output.list
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc       620 Feb  7 14:08 runtime_log
[2026-02-07 14:08:07] -rw------- 1 boinc boinc   1034240 Feb  7 14:08 result.tar.gz
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc      8916 Feb  7 14:08 runtime_log.err
[2026-02-07 14:08:07] -rw------- 1 boinc boinc       661 Feb  7 14:08 5AiMDmX0f88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2eZKDmonwjHn.diag
[2026-02-07 14:08:07] -rw-r--r-- 1 boinc boinc     21329 Feb  7 14:08 stderr.txt
[2026-02-07 14:08:07] HITS file was successfully produced:
[2026-02-07 14:08:07] -rw------- 1 boinc boinc 188393486 Feb  7 14:07 shared/HITS.pool.root.1
[2026-02-07 14:08:07]  *** Contents of shared directory: ***
[2026-02-07 14:08:07] total 672120
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc 498194437 Feb  7 12:43 ATLAS.root_0
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc    597963 Feb  7 12:43 input.tar.gz
[2026-02-07 14:08:07] -rw-r--r-- 2 boinc boinc     15845 Feb  7 12:43 start_atlas.sh
[2026-02-07 14:08:07] -rw------- 1 boinc boinc 188393486 Feb  7 14:07 HITS.pool.root.1
[2026-02-07 14:08:07] -rw------- 1 boinc boinc   1034240 Feb  7 14:08 result.tar.gz
14:08:09 (83847): run_atlas exited; CPU time 14406.094197
14:08:09 (83847): called boinc_finish(0)

</stderr_txt>
]]>

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