Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:51 (37410): wrapper (7.7.26015): starting
13:37:51 (37410): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 13:37:51] Arguments: --nthreads 8
[2026-02-06 13:37:51] Threads: 8
[2026-02-06 13:37:51] Checking for CVMFS
[2026-02-06 13:37:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 13:37:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 13:37:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 13:37:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 13:37:52] 2.11.2.0 13817 649408 311456 155956 0 50 11154816 18432001 2749 130560 8 348080530 99.703 269824263 24496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-02-06 13:37:52] CVMFS is ok
[2026-02-06 13:37:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 13:37:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 13:37:52] Further information can be found at the LHC@home message board.
[2026-02-06 13:37:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 13:37:52] Checking for apptainer binary...
[2026-02-06 13:37:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 13:37:52] Running /usr/bin/apptainer --version
[2026-02-06 13:37:52] apptainer version 1.3.2-1.el7
[2026-02-06 13:37:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 13:37:53] c-9-29.aglt2.org
[2026-02-06 13:37:53] apptainer works
[2026-02-06 13:37:53] Set ATHENA_PROC_NUMBER=8
[2026-02-06 13:37:53] Set ATHENA_CORE_NUMBER=8
[2026-02-06 13:37:53] Starting ATLAS job with PandaID=6991676335
[2026-02-06 13:37:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 16:28:33]  *** The last 200 lines of the pilot log: ***
[2026-02-06 16:28:33] 2026-02-06 21:27:59,999 | INFO     | time since job start (10192s) is within the limit (349056.0s)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,074 | INFO     | job 6991676335 has state=finished
[2026-02-06 16:28:33] 2026-02-06 21:28:00,074 | INFO     | preparing for final server update for job 6991676335 in state='finished'
[2026-02-06 16:28:33] 2026-02-06 21:28:00,148 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,149 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6991676335/jobReport.json
[2026-02-06 16:28:33] 2026-02-06 21:28:00,152 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-06 16:28:33] 2026-02-06 21:28:00,152 | INFO     | this job has now completed (state=finished)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,152 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,152 | INFO     | log transfer has been attempted: DONE
[2026-02-06 16:28:33] 2026-02-06 21:28:00,153 | INFO     | job 6991676335 has finished - writing final server update
[2026-02-06 16:28:33] 2026-02-06 21:28:00,153 | INFO     | total number of processed events: 400 (read)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,159 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6991676335/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,160 | INFO     | extracted standard info from prmon json
[2026-02-06 16:28:33] 2026-02-06 21:28:00,160 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 16:28:33] 2026-02-06 21:28:00,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 16:28:33] 2026-02-06 21:28:00,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 16:28:33] 2026-02-06 21:28:00,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 16:28:33] 2026-02-06 21:28:00,166 | INFO     | fitting pss+swap vs Time
[2026-02-06 16:28:33] 2026-02-06 21:28:00,166 | INFO     | sum of square deviations: 1444149868.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,167 | INFO     | sum of deviations: -1786481990.0000024
[2026-02-06 16:28:33] 2026-02-06 21:28:00,167 | INFO     | mean x: 1770408170.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,167 | INFO     | mean y: 2512036.473053892
[2026-02-06 16:28:33] 2026-02-06 21:28:00,168 | INFO     | intersect: 2192591044.709243
[2026-02-06 16:28:33] 2026-02-06 21:28:00,168 | INFO     | chi2: 1.497059195611189
[2026-02-06 16:28:33] 2026-02-06 21:28:00,169 | INFO     | sum of square deviations: 1318277740.5
[2026-02-06 16:28:33] 2026-02-06 21:28:00,170 | INFO     | sum of deviations: -1739304284.9999952
[2026-02-06 16:28:33] 2026-02-06 21:28:00,170 | INFO     | mean x: 1770408017.5
[2026-02-06 16:28:33] 2026-02-06 21:28:00,170 | INFO     | mean y: 2512093.654320988
[2026-02-06 16:28:33] 2026-02-06 21:28:00,170 | INFO     | intersect: 2338346308.5809717
[2026-02-06 16:28:33] 2026-02-06 21:28:00,171 | INFO     | chi2: 1.4967388277727904
[2026-02-06 16:28:33] 2026-02-06 21:28:00,171 | INFO     | current chi2=1.4967388277727904 (change=0.021399810998636703 %)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,171 | INFO     | right removable region: 161
[2026-02-06 16:28:33] 2026-02-06 21:28:00,171 | INFO     | sum of square deviations: 1318277740.5
[2026-02-06 16:28:33] 2026-02-06 21:28:00,172 | INFO     | sum of deviations: -24863612932.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,173 | INFO     | mean x: 1770408322.5
[2026-02-06 16:28:33] 2026-02-06 21:28:00,173 | INFO     | mean y: 2539581.037037037
[2026-02-06 16:28:33] 2026-02-06 21:28:00,173 | INFO     | intersect: 33393642161.23829
[2026-02-06 16:28:33] 2026-02-06 21:28:00,173 | INFO     | chi2: 0.14892532969483183
[2026-02-06 16:28:33] 2026-02-06 21:28:00,173 | INFO     | current chi2=0.14892532969483183 (change=90.05214154981816 %)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,174 | INFO     | sum of square deviations: 1199940638.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,175 | INFO     | sum of deviations: -22054957297.000004
[2026-02-06 16:28:33] 2026-02-06 21:28:00,175 | INFO     | mean x: 1770408475.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,175 | INFO     | mean y: 2535907.9171974524
[2026-02-06 16:28:33] 2026-02-06 21:28:00,175 | INFO     | intersect: 32542715044.988728
[2026-02-06 16:28:33] 2026-02-06 21:28:00,176 | INFO     | chi2: 0.1375629935800495
[2026-02-06 16:28:33] 2026-02-06 21:28:00,176 | INFO     | current chi2=0.1375629935800495 (change=7.629552432796549 %)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,176 | INFO     | left removable region: 20
[2026-02-06 16:28:33] 2026-02-06 21:28:00,176 | INFO     | sum of square deviations: 869188390.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,177 | INFO     | sum of deviations: -11422089875.000002
[2026-02-06 16:28:33] 2026-02-06 21:28:00,178 | INFO     | mean x: 1770408597.0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,178 | INFO     | mean y: 2521677.1134751774
[2026-02-06 16:28:33] 2026-02-06 21:28:00,178 | INFO     | intersect: 23267634675.69674
[2026-02-06 16:28:33] 2026-02-06 21:28:00,178 | INFO     | chi2: 0.10273046727570807
[2026-02-06 16:28:33] 2026-02-06 21:28:00,178 | INFO     | current memory leak: -13.14 B/s (using 141 data points, chi2=0.10)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,179 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,179 | INFO     | ..............................
[2026-02-06 16:28:33] 2026-02-06 21:28:00,179 | INFO     | . Timing measurements:
[2026-02-06 16:28:33] 2026-02-06 21:28:00,179 | INFO     | . get job = 0 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . initial setup = 5 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . payload setup = 4 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . stage-in = 0 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . payload execution = 10170 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . stage-out = 0 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | . log creation = 0 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,180 | INFO     | ..............................
[2026-02-06 16:28:33] 2026-02-06 21:28:00,321 | INFO     | 
[2026-02-06 16:28:33] 2026-02-06 21:28:00,321 | INFO     | job summary report
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | --------------------------------------------------
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | PanDA job id: 6991676335
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | task id: 48317931
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | errors: (none)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 16:28:33] 2026-02-06 21:28:00,322 | INFO     | pilot state: finished 
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | transexitcode: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | exeerrorcode: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | exeerrordiag: 
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | exitcode: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | exitmsg: OK
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | cpuconsumptiontime: 76711 s
[2026-02-06 16:28:33] 2026-02-06 21:28:00,323 | INFO     | nevents: 400
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | neventsw: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | pid: 45563
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | pgrp: 45563
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | corecount: 8
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | event service: False
[2026-02-06 16:28:33] 2026-02-06 21:28:00,324 | INFO     | sizes: {0: 2282769, 1: 2282975, 11: 2283003, 10178: 2311672, 10179: 2311671, 10180: 2320909, 10182: 2321111}
[2026-02-06 16:28:33] 2026-02-06 21:28:00,325 | INFO     | --------------------------------------------------
[2026-02-06 16:28:33] 2026-02-06 21:28:00,325 | INFO     | 
[2026-02-06 16:28:33] 2026-02-06 21:28:00,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 16:28:33] 2026-02-06 21:28:00,349 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 16:28:33] 2026-02-06 21:28:00,353 | INFO     | job 6991676335 has completed (purged errors)
[2026-02-06 16:28:33] 2026-02-06 21:28:00,353 | INFO     | overall cleanup function is called
[2026-02-06 16:28:33] 2026-02-06 21:28:01,361 | INFO     | --- collectZombieJob: --- 10, [45563]
[2026-02-06 16:28:33] 2026-02-06 21:28:01,361 | INFO     | zombie collector waiting for pid 45563
[2026-02-06 16:28:33] 2026-02-06 21:28:01,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 16:28:33] 2026-02-06 21:28:01,362 | INFO     | collected zombie processes
[2026-02-06 16:28:33] 2026-02-06 21:28:01,362 | INFO     | will attempt to kill all subprocesses of pid=45563
[2026-02-06 16:28:33] 2026-02-06 21:28:01,587 | INFO     | process IDs to be killed: [45563] (in reverse order)
[2026-02-06 16:28:33] 2026-02-06 21:28:01,654 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 16:28:33] 2026-02-06 21:28:01,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 16:28:33] 2026-02-06 21:28:01,659 | INFO     | did not find any defunct processes belonging to 45563
[2026-02-06 16:28:33] 2026-02-06 21:28:01,662 | INFO     | did not find any defunct processes belonging to 45563
[2026-02-06 16:28:33] 2026-02-06 21:28:01,662 | INFO     | ready for new job
[2026-02-06 16:28:33] 2026-02-06 21:28:01,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 16:28:33] 2026-02-06 21:28:01,664 | INFO     | **************************************
[2026-02-06 16:28:33] 2026-02-06 21:28:01,664 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-06 16:28:33] 2026-02-06 21:28:01,664 | INFO     | **************************************
[2026-02-06 16:28:33] 2026-02-06 21:28:01,664 | INFO     | 
[2026-02-06 16:28:33] 2026-02-06 21:28:01,665 | INFO     | architecture information:
[2026-02-06 16:28:33] 2026-02-06 21:28:01,666 | INFO     | executing command: cat /etc/os-release
[2026-02-06 16:28:33] 2026-02-06 21:28:01,678 | INFO     | cat /etc/os-release:
[2026-02-06 16:28:33] NAME="CentOS Linux"
[2026-02-06 16:28:33] VERSION="7 (Core)"
[2026-02-06 16:28:33] ID="centos"
[2026-02-06 16:28:33] ID_LIKE="rhel fedora"
[2026-02-06 16:28:33] VERSION_ID="7"
[2026-02-06 16:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 16:28:33] ANSI_COLOR="0;31"
[2026-02-06 16:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 16:28:33] HOME_URL="https://www.centos.org/"
[2026-02-06 16:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 16:28:33] 
[2026-02-06 16:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 16:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 16:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 16:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 16:28:33] 
[2026-02-06 16:28:33] 2026-02-06 21:28:01,679 | INFO     | **************************************
[2026-02-06 16:28:33] 2026-02-06 21:28:02,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 16:28:33] 2026-02-06 21:28:02,206 | INFO     | sufficient remaining disk space (102717456384 B)
[2026-02-06 16:28:33] 2026-02-06 21:28:02,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 16:28:33] 2026-02-06 21:28:02,207 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 16:28:33] 2026-02-06 21:28:02,207 | INFO     | update_server=False
[2026-02-06 16:28:33] 2026-02-06 21:28:02,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 16:28:33] 2026-02-06 21:28:02,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:28:33] 2026-02-06 21:28:02,259 | INFO     | all data control threads have been joined
[2026-02-06 16:28:33] 2026-02-06 21:28:02,914 | INFO     | all payload control threads have been joined
[2026-02-06 16:28:33] 2026-02-06 21:28:03,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:28:33] 2026-02-06 21:28:03,082 | INFO     | aborting loop
[2026-02-06 16:28:33] 2026-02-06 21:28:03,213 | INFO     | [job] queue monitor thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,214 | INFO     | [job] retrieve thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,265 | INFO     | [data] control thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,358 | INFO     | all job control threads have been joined
[2026-02-06 16:28:33] 2026-02-06 21:28:03,390 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 16:28:33] 2026-02-06 21:28:03,411 | INFO     | [payload] failed_post thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,725 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,868 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:03,919 | INFO     | [payload] control thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,088 | INFO     | [job] job monitor thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,271 | INFO     | [payload] validate_post thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,364 | INFO     | [job] control thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,378 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,379 | INFO     | [job] validate thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:04,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 16:28:33] 2026-02-06 21:28:04,673 | INFO     | [data] copytool_in thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:05,417 | INFO     | [data] copytool_out thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:08,460 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 16:28:33] 2026-02-06 21:28:23,375 | INFO     | [monitor] cgroup control has ended
[2026-02-06 16:28:33] 2026-02-06 21:28:24,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768416147264)>', '<ExcThread(monitor, started 139767605872384)>']
[2026-02-06 16:28:33] 2026-02-06 21:28:29,760 | INFO     | all workflow threads have been joined
[2026-02-06 16:28:33] 2026-02-06 21:28:29,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 16:28:33] 2026-02-06 21:28:29,761 | INFO     | traces error code: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:29,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 16:28:33] 2026-02-06 21:28:33,313 | INFO     | PID=41093 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-06 16:28:33] 2026-02-06 21:28:33,313 | INFO     | .. there are 4 such processes running
[2026-02-06 16:28:33] 2026-02-06 21:28:33,314 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 16:28:33] 2026-02-06 21:28:33,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 16:28:33] 2026-02-06 21:28:33,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 16:28:33] 2026-02-06 21:28:33,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 16:28:33] 2026-02-06 21:28:33,314 | INFO     | [monitor] control thread has ended
[2026-02-06 16:28:33] 2026-02-06 21:28:33,418 [wrapper] ==== pilot stdout END ====
[2026-02-06 16:28:33] 2026-02-06 21:28:33,420 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 16:28:33] 2026-02-06 21:28:33,423 [wrapper] pilotpid: 41093
[2026-02-06 16:28:33] 2026-02-06 21:28:33,425 [wrapper] Pilot exit status: 0
[2026-02-06 16:28:33] 2026-02-06 21:28:33,435 [wrapper] pandaids: 6991676335
[2026-02-06 16:28:33] 2026-02-06 21:28:33,471 [wrapper] cleanup supervisor_pilot 34693 41094
[2026-02-06 16:28:33] 2026-02-06 21:28:33,477 [wrapper] Test setup, not cleaning
[2026-02-06 16:28:33] 2026-02-06 21:28:33,480 [wrapper] apfmon messages muted
[2026-02-06 16:28:33] 2026-02-06 21:28:33,484 [wrapper] ==== wrapper stdout END ====
[2026-02-06 16:28:33] 2026-02-06 21:28:33,486 [wrapper] ==== wrapper stderr END ====
[2026-02-06 16:28:33]  *** Error codes and diagnostics ***
[2026-02-06 16:28:33]     "exeErrorCode": 0,
[2026-02-06 16:28:33]     "exeErrorDiag": "",
[2026-02-06 16:28:33]     "pilotErrorCode": 0,
[2026-02-06 16:28:33]     "pilotErrorDiag": "",
[2026-02-06 16:28:33]  *** Listing of results directory ***
[2026-02-06 16:28:33] total 669772
[2026-02-06 16:28:33] -rwx------ 1 boincer umatlas     36322 Jan 29 07:51 runpilot2-wrapper.sh
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas    584422 Jan 29 07:52 pilot3.tar.gz
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas      5111 Jan 29 07:53 queuedata.json
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas       100 Feb  6 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 16:28:33] -rwxr-xr-x 1 boincer umatlas      7986 Feb  6 13:37 run_atlas
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas       105 Feb  6 13:37 job.xml
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas 493431810 Feb  6 13:37 EVNT.48317929._000026.pool.root.1
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 13:37 start_atlas.sh
[2026-02-06 16:28:33] drwxrwx--x 2 boincer umatlas      4096 Feb  6 13:37 shared
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas    597763 Feb  6 13:37 input.tar.gz
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas         0 Feb  6 13:37 boinc_lockfile
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas      2510 Feb  6 13:37 pandaJob.out
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas        57 Feb  6 13:37 setup.sh.local
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas   1009512 Feb  6 13:38 agis_schedconf.cvmfs.json
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas   1513088 Feb  6 13:38 agis_ddmendpoints.agis.ALL.json
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas       438 Feb  6 13:38 workernode_map.json
[2026-02-06 16:28:33] drwx------ 5 boincer umatlas      4096 Feb  6 13:38 pilot3
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas      6035 Feb  6 16:20 init_data.xml
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas 184740435 Feb  6 16:27 HITS.48317931._005412.pool.root.1
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas       531 Feb  6 16:27 boinc_task_state.xml
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas      1047 Feb  6 16:27 memory_monitor_summary.json
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas    442832 Feb  6 16:27 log.48317931._005412.job.log.tgz.1
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas      6399 Feb  6 16:28 heartbeat.json
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas        28 Feb  6 16:28 wrapper_checkpoint.txt
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas      8192 Feb  6 16:28 boinc_mmap_file
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas        95 Feb  6 16:28 pilot_heartbeat.json
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas       820 Feb  6 16:28 pilotlog.txt
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas   1425600 Feb  6 16:28 log.48317931._005412.job.log.1
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas       357 Feb  6 16:28 output.list
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas       620 Feb  6 16:28 runtime_log
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas   1884160 Feb  6 16:28 result.tar.gz
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas      9332 Feb  6 16:28 runtime_log.err
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas       658 Feb  6 16:28 lChLDmrfg58n9Rq4apOajLDm4fhM0noT9bVooX4SDmVjIKDmJrZuLm.diag
[2026-02-06 16:28:33] -rw-r--r-- 1 boincer umatlas     21249 Feb  6 16:28 stderr.txt
[2026-02-06 16:28:33] HITS file was successfully produced:
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas 184740435 Feb  6 16:27 shared/HITS.pool.root.1
[2026-02-06 16:28:33]  *** Contents of shared directory: ***
[2026-02-06 16:28:33] total 664724
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas 493431810 Feb  6 13:37 ATLAS.root_0
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 13:37 start_atlas.sh
[2026-02-06 16:28:33] -rw-r--r-- 2 boincer umatlas    597763 Feb  6 13:37 input.tar.gz
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas 184740435 Feb  6 16:27 HITS.pool.root.1
[2026-02-06 16:28:33] -rw------- 1 boincer umatlas   1884160 Feb  6 16:28 result.tar.gz
16:28:35 (37410): run_atlas exited; CPU time 76932.279202
16:28:35 (37410): called boinc_finish(0)

</stderr_txt>
]]>

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