Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:21 (97410): wrapper (7.7.26015): starting
01:40:21 (97410): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 01:40:21] Arguments: --nthreads 2
[2026-02-07 01:40:21] Threads: 2
[2026-02-07 01:40:21] Checking for CVMFS
[2026-02-07 01:40:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 01:40:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 01:40:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 01:40:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 01:40:22] 2.9.2.0 2935 854 57616 155965 2 49 30266430 36864000 0 130560 0 278644 99.975 35648 19915 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 01:40:22] CVMFS is ok
[2026-02-07 01:40:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 01:40:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 01:40:22] Further information can be found at the LHC@home message board.
[2026-02-07 01:40:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 01:40:22] Checking for apptainer binary...
[2026-02-07 01:40:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 01:40:22] Running /usr/bin/apptainer --version
[2026-02-07 01:40:22] apptainer version 1.4.1-1.1
[2026-02-07 01:40:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 01:40:22] magicA244
[2026-02-07 01:40:22] apptainer works
[2026-02-07 01:40:22] Set ATHENA_PROC_NUMBER=2
[2026-02-07 01:40:22] Set ATHENA_CORE_NUMBER=2
[2026-02-07 01:40:22] Starting ATLAS job with PandaID=6997901536
[2026-02-07 01:40:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 03:42:12]  *** The last 200 lines of the pilot log: ***
[2026-02-07 03:42:12] 2026-02-07 02:41:42,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 03:42:12] 2026-02-07 02:41:42,353 | INFO     | will abort loop
[2026-02-07 03:42:12] 2026-02-07 02:41:42,559 | INFO     | job.realtimelogging is not enabled
[2026-02-07 03:42:12] 2026-02-07 02:41:43,151 | INFO     | [job] retrieve thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,152 | INFO     | [job] queue monitor thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,251 | INFO     | [job] control thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,337 | INFO     | [data] control thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,359 | INFO     | [job] job monitor thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,432 | INFO     | [payload] failed_post thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 03:42:12] 2026-02-07 02:41:43,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,647 | INFO     | all payload control threads have been joined
[2026-02-07 03:42:12] 2026-02-07 02:41:43,910 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,932 | INFO     | [job] validate thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:43,993 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:44,101 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:44,133 | INFO     | [payload] validate_post thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:44,151 | INFO     | [data] copytool_in thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:44,653 | INFO     | [payload] control thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:45,477 | INFO     | [data] copytool_out thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:46,152 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 03:42:12] 2026-02-07 02:41:54,379 | INFO     | [monitor] cgroup control has ended
[2026-02-07 03:42:12] 2026-02-07 02:41:55,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140653620524864)>', '<ExcThread(monitor, started 140652956329728)>']
[2026-02-07 03:42:12] 2026-02-07 02:42:00,539 | INFO     | all workflow threads have been joined
[2026-02-07 03:42:12] 2026-02-07 02:42:00,540 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 03:42:12] 2026-02-07 02:42:00,540 | INFO     | traces error code: 0
[2026-02-07 03:42:12] 2026-02-07 02:42:00,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | INFO     | PID=101438 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 03:42:12] 2026-02-07 02:42:12,370 | INFO     | [monitor] control thread has ended
[2026-02-07 03:42:12] 2026-02-07 02:42:12,409 [wrapper] ==== pilot stdout END ====
[2026-02-07 03:42:12] 2026-02-07 02:42:12,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 03:42:12] 2026-02-07 02:42:12,414 [wrapper] pilotpid: 101438
[2026-02-07 03:42:12] 2026-02-07 02:42:12,417 [wrapper] Pilot exit status: 0
[2026-02-07 03:42:12] 2026-02-07 02:42:12,422 [wrapper] pandaids: 6997901536
[2026-02-07 03:42:12] 2026-02-07 02:42:12,434 [wrapper] cleanup supervisor_pilot  111324 101439
[2026-02-07 03:42:12] 2026-02-07 02:42:12,436 [wrapper] Test setup, not cleaning
[2026-02-07 03:42:12] 2026-02-07 02:42:12,438 [wrapper] apfmon messages muted
[2026-02-07 03:42:12] 2026-02-07 02:42:12,440 [wrapper] ==== wrapper stdout END ====
[2026-02-07 03:42:12] 2026-02-07 02:42:12,442 [wrapper] ==== wrapper stderr END ====
[2026-02-07 03:42:12]  *** Error codes and diagnostics ***
[2026-02-07 03:42:12]     "exeErrorCode": 0,
[2026-02-07 03:42:12]     "exeErrorDiag": "",
[2026-02-07 03:42:12]     "pilotErrorCode": 0,
[2026-02-07 03:42:12]     "pilotErrorDiag": "",
[2026-02-07 03:42:12]  *** Listing of results directory ***
[2026-02-07 03:42:12] total 716748
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc    584627 Feb  6 13:12 pilot3.tar.gz
[2026-02-07 03:42:12] -rwx------ 1 boinc boinc     36322 Feb  6 13:15 runpilot2-wrapper.sh
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      5111 Feb  6 13:16 queuedata.json
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc       100 Feb  7 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 03:42:12] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 01:40 run_atlas
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc       105 Feb  7 01:40 job.xml
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc 532818386 Feb  7 01:40 EVNT.48466711._000004.pool.root.1
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc    597934 Feb  7 01:40 input.tar.gz
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc     15845 Feb  7 01:40 start_atlas.sh
[2026-02-07 03:42:12] drwxrwx--x 2 boinc boinc      4096 Feb  7 01:40 shared
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc         0 Feb  7 01:40 boinc_setup_complete
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      6208 Feb  7 01:40 init_data.xml
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc         0 Feb  7 01:40 boinc_lockfile
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      2496 Feb  7 01:40 pandaJob.out
[2026-02-07 03:42:12] -rw------- 1 boinc boinc   1009520 Feb  7 01:40 agis_schedconf.cvmfs.json
[2026-02-07 03:42:12] -rw------- 1 boinc boinc   1513088 Feb  7 01:40 agis_ddmendpoints.agis.ALL.json
[2026-02-07 03:42:12] -rw------- 1 boinc boinc       429 Feb  7 01:40 workernode_map.json
[2026-02-07 03:42:12] drwx------ 5 boinc boinc      4096 Feb  7 01:40 pilot3
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc       530 Feb  7 03:41 boinc_task_state.xml
[2026-02-07 03:42:12] -rw------- 1 boinc boinc 194501896 Feb  7 03:41 HITS.48466714._000299.pool.root.1
[2026-02-07 03:42:12] -rw------- 1 boinc boinc      1019 Feb  7 03:41 memory_monitor_summary.json
[2026-02-07 03:42:12] -rw------- 1 boinc boinc    312447 Feb  7 03:41 log.48466714._000299.job.log.tgz.1
[2026-02-07 03:42:12] -rw------- 1 boinc boinc      6310 Feb  7 03:41 heartbeat.json
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      8192 Feb  7 03:42 boinc_mmap_file
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc        27 Feb  7 03:42 wrapper_checkpoint.txt
[2026-02-07 03:42:12] -rw------- 1 boinc boinc       746 Feb  7 03:42 pilotlog.txt
[2026-02-07 03:42:12] -rw------- 1 boinc boinc        95 Feb  7 03:42 pilot_heartbeat.json
[2026-02-07 03:42:12] -rw------- 1 boinc boinc   1044199 Feb  7 03:42 log.48466714._000299.job.log.1
[2026-02-07 03:42:12] -rw------- 1 boinc boinc       357 Feb  7 03:42 output.list
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc       620 Feb  7 03:42 runtime_log
[2026-02-07 03:42:12] -rw------- 1 boinc boinc   1372160 Feb  7 03:42 result.tar.gz
[2026-02-07 03:42:12] -rw------- 1 boinc boinc       660 Feb  7 03:42 u7nNDmyuZ88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSzYKDmafVwUn.diag
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      8911 Feb  7 03:42 runtime_log.err
[2026-02-07 03:42:12] -rw-r--r-- 1 boinc boinc      6820 Feb  7 03:42 stderr.txt
[2026-02-07 03:42:12] HITS file was successfully produced:
[2026-02-07 03:42:12] -rw------- 1 boinc boinc 194501896 Feb  7 03:41 shared/HITS.pool.root.1
[2026-02-07 03:42:12]  *** Contents of shared directory: ***
[2026-02-07 03:42:12] total 712224
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc 532818386 Feb  7 01:40 ATLAS.root_0
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc    597934 Feb  7 01:40 input.tar.gz
[2026-02-07 03:42:12] -rw-r--r-- 2 boinc boinc     15845 Feb  7 01:40 start_atlas.sh
[2026-02-07 03:42:12] -rw------- 1 boinc boinc 194501896 Feb  7 03:41 HITS.pool.root.1
[2026-02-07 03:42:12] -rw------- 1 boinc boinc   1372160 Feb  7 03:42 result.tar.gz
03:42:13 (97410): run_atlas exited; CPU time 14099.162364
03:42:13 (97410): called boinc_finish(0)

</stderr_txt>
]]>

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