Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:42:36 (111454): wrapper (7.7.26015): starting
03:42:36 (111454): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 03:42:36] Arguments: --nthreads 2
[2026-02-07 03:42:36] Threads: 2
[2026-02-07 03:42:36] Checking for CVMFS
[2026-02-07 03:42:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 03:42:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 03:42:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 03:42:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 03:42:37] 2.9.2.0 2935 977 57960 155967 0 50 30275666 36864001 0 130560 0 319199 99.978 38340 18406 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 03:42:37] CVMFS is ok
[2026-02-07 03:42:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 03:42:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 03:42:37] Further information can be found at the LHC@home message board.
[2026-02-07 03:42:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 03:42:37] Checking for apptainer binary...
[2026-02-07 03:42:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 03:42:37] Running /usr/bin/apptainer --version
[2026-02-07 03:42:37] apptainer version 1.4.1-1.1
[2026-02-07 03:42:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 03:42:37] magicA244
[2026-02-07 03:42:37] apptainer works
[2026-02-07 03:42:37] Set ATHENA_PROC_NUMBER=2
[2026-02-07 03:42:37] Set ATHENA_CORE_NUMBER=2
[2026-02-07 03:42:37] Starting ATLAS job with PandaID=6997424866
[2026-02-07 03:42:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 06:01:17]  *** The last 200 lines of the pilot log: ***
[2026-02-07 06:01:17] 2026-02-07 05:00:13,205 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:13,318 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:13,342 | INFO     | [data] copytool_in thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:13,352 | INFO     | [job] validate thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:13,366 | INFO     | [job] control thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:14,508 | INFO     | job.realtimelogging is not enabled
[2026-02-07 06:01:17] 2026-02-07 05:00:14,699 | INFO     | [data] copytool_out thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:15,347 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:15,514 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 06:01:17] 2026-02-07 05:00:42,112 | INFO     | PID=115478 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 06:01:17] 2026-02-07 05:00:42,112 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 06:01:17] 2026-02-07 05:00:42,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 06:01:17] 2026-02-07 05:00:42,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 06:01:17] 2026-02-07 05:01:10,247 | INFO     | [monitor] cgroup control has ended
[2026-02-07 06:01:17] 2026-02-07 05:01:11,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468203718464)>', '<ExcThread(monitor, started 140467442284288)>']
[2026-02-07 06:01:17] 2026-02-07 05:01:12,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 06:01:17] 2026-02-07 05:01:12,267 | INFO     | [monitor] control thread has ended
[2026-02-07 06:01:17] 2026-02-07 05:01:16,726 | INFO     | all workflow threads have been joined
[2026-02-07 06:01:17] 2026-02-07 05:01:16,727 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 06:01:17] 2026-02-07 05:01:16,727 | INFO     | traces error code: 0
[2026-02-07 06:01:17] 2026-02-07 05:01:16,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 06:01:17] 2026-02-07 05:01:16,770 [wrapper] ==== pilot stdout END ====
[2026-02-07 06:01:17] 2026-02-07 05:01:16,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 06:01:17] 2026-02-07 05:01:16,774 [wrapper] pilotpid: 115478
[2026-02-07 06:01:17] 2026-02-07 05:01:16,776 [wrapper] Pilot exit status: 0
[2026-02-07 06:01:17] 2026-02-07 05:01:16,782 [wrapper] pandaids: 6997424866
[2026-02-07 06:01:17] 2026-02-07 05:01:16,794 [wrapper] cleanup supervisor_pilot  125637 115479
[2026-02-07 06:01:17] 2026-02-07 05:01:16,796 [wrapper] Test setup, not cleaning
[2026-02-07 06:01:17] 2026-02-07 05:01:16,798 [wrapper] apfmon messages muted
[2026-02-07 06:01:17] 2026-02-07 05:01:16,800 [wrapper] ==== wrapper stdout END ====
[2026-02-07 06:01:17] 2026-02-07 05:01:16,802 [wrapper] ==== wrapper stderr END ====
[2026-02-07 06:01:17]  *** Error codes and diagnostics ***
[2026-02-07 06:01:17]     "exeErrorCode": 0,
[2026-02-07 06:01:17]     "exeErrorDiag": "",
[2026-02-07 06:01:17]     "pilotErrorCode": 0,
[2026-02-07 06:01:17]     "pilotErrorDiag": "",
[2026-02-07 06:01:17]  *** Listing of results directory ***
[2026-02-07 06:01:17] total 681260
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc    584627 Feb  6 13:12 pilot3.tar.gz
[2026-02-07 06:01:17] -rwx------ 1 boinc boinc     36322 Feb  6 13:15 runpilot2-wrapper.sh
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      5111 Feb  6 13:18 queuedata.json
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc       100 Feb  7 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 06:01:17] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 03:42 run_atlas
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc       105 Feb  7 03:42 job.xml
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc 499692686 Feb  7 03:42 EVNT.48318016._000036.pool.root.1
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc    597947 Feb  7 03:42 input.tar.gz
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc     15845 Feb  7 03:42 start_atlas.sh
[2026-02-07 06:01:17] drwxrwx--x 2 boinc boinc      4096 Feb  7 03:42 shared
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc         0 Feb  7 03:42 boinc_setup_complete
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      6208 Feb  7 03:42 init_data.xml
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc         0 Feb  7 03:42 boinc_lockfile
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      2521 Feb  7 03:42 pandaJob.out
[2026-02-07 06:01:17] -rw------- 1 boinc boinc   1009520 Feb  7 03:42 agis_schedconf.cvmfs.json
[2026-02-07 06:01:17] -rw------- 1 boinc boinc   1513088 Feb  7 03:42 agis_ddmendpoints.agis.ALL.json
[2026-02-07 06:01:17] -rw------- 1 boinc boinc       428 Feb  7 03:42 workernode_map.json
[2026-02-07 06:01:17] drwx------ 5 boinc boinc      4096 Feb  7 03:43 pilot3
[2026-02-07 06:01:17] -rw------- 1 boinc boinc 190994165 Feb  7 05:59 HITS.48318018._001832.pool.root.1
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc       530 Feb  7 06:00 boinc_task_state.xml
[2026-02-07 06:01:17] -rw------- 1 boinc boinc      1012 Feb  7 06:00 memory_monitor_summary.json
[2026-02-07 06:01:17] -rw------- 1 boinc boinc    319609 Feb  7 06:00 log.48318018._001832.job.log.tgz.1
[2026-02-07 06:01:17] -rw------- 1 boinc boinc      6301 Feb  7 06:00 heartbeat.json
[2026-02-07 06:01:17] -rw------- 1 boinc boinc        95 Feb  7 06:00 pilot_heartbeat.json
[2026-02-07 06:01:17] -rw------- 1 boinc boinc      4819 Feb  7 06:01 pilotlog.txt
[2026-02-07 06:01:17] -rw------- 1 boinc boinc   1176087 Feb  7 06:01 log.48318018._001832.job.log.1
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc        27 Feb  7 06:01 wrapper_checkpoint.txt
[2026-02-07 06:01:17] -rw------- 1 boinc boinc       357 Feb  7 06:01 output.list
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc       620 Feb  7 06:01 runtime_log
[2026-02-07 06:01:17] -rw------- 1 boinc boinc   1515520 Feb  7 06:01 result.tar.gz
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      8192 Feb  7 06:01 boinc_mmap_file
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      8911 Feb  7 06:01 runtime_log.err
[2026-02-07 06:01:17] -rw------- 1 boinc boinc       660 Feb  7 06:01 FU5LDmlvZ88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2zYKDmB3OINm.diag
[2026-02-07 06:01:17] -rw-r--r-- 1 boinc boinc      5596 Feb  7 06:01 stderr.txt
[2026-02-07 06:01:17] HITS file was successfully produced:
[2026-02-07 06:01:17] -rw------- 1 boinc boinc 190994165 Feb  7 05:59 shared/HITS.pool.root.1
[2026-02-07 06:01:17]  *** Contents of shared directory: ***
[2026-02-07 06:01:17] total 676592
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc 499692686 Feb  7 03:42 ATLAS.root_0
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc    597947 Feb  7 03:42 input.tar.gz
[2026-02-07 06:01:17] -rw-r--r-- 2 boinc boinc     15845 Feb  7 03:42 start_atlas.sh
[2026-02-07 06:01:17] -rw------- 1 boinc boinc 190994165 Feb  7 05:59 HITS.pool.root.1
[2026-02-07 06:01:17] -rw------- 1 boinc boinc   1515520 Feb  7 06:01 result.tar.gz
06:01:19 (111454): run_atlas exited; CPU time 16059.843539
06:01:19 (111454): called boinc_finish(0)

</stderr_txt>
]]>

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