Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:23 (42036): wrapper (7.7.26015): starting
05:20:23 (42036): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 05:20:23] Arguments: --nthreads 4
[2026-02-07 05:20:23] Threads: 4
[2026-02-07 05:20:23] Checking for CVMFS
[2026-02-07 05:20:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 05:20:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 05:20:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 05:20:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 05:20:23] 2.9.2.0 4024726 1157 85608 155971 1 49 23300018 36864001 0 130560 0 597485 99.984 49176 9243 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 05:20:23] CVMFS is ok
[2026-02-07 05:20:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 05:20:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 05:20:23] Further information can be found at the LHC@home message board.
[2026-02-07 05:20:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 05:20:23] Checking for apptainer binary...
[2026-02-07 05:20:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 05:20:23] Running /usr/bin/apptainer --version
[2026-02-07 05:20:23] apptainer version 1.4.5-1.1
[2026-02-07 05:20:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 05:20:23] thA350a
[2026-02-07 05:20:23] apptainer works
[2026-02-07 05:20:23] Set ATHENA_PROC_NUMBER=4
[2026-02-07 05:20:23] Set ATHENA_CORE_NUMBER=4
[2026-02-07 05:20:23] Starting ATLAS job with PandaID=6997901554
[2026-02-07 05:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 06:31:04]  *** The last 200 lines of the pilot log: ***
[2026-02-07 06:31:04]  is_altstaged=None
[2026-02-07 06:31:04]  is_tar=False
[2026-02-07 06:31:04]  lfn=log.48466714._000317.job.log.tgz.1
[2026-02-07 06:31:04]  mtime=0
[2026-02-07 06:31:04]  protocol_id=None
[2026-02-07 06:31:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 06:31:04]  replicas=None
[2026-02-07 06:31:04]  scope=mc23_13p6TeV
[2026-02-07 06:31:04]  status=None
[2026-02-07 06:31:04]  status_code=0
[2026-02-07 06:31:04]  storage_token=
[2026-02-07 06:31:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6997901554/log.48466714._000317.job.log.tgz.1
[2026-02-07 06:31:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/13/log.48466714._000317.job.log.tgz.1
[2026-02-07 06:31:04]  workdir=None
[2026-02-07 06:31:04] ]
[2026-02-07 06:31:04] 2026-02-07 05:30:27,700 | INFO     | transferring file log.48466714._000317.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6997901554/log.48466714._000317.job.log.tgz.1 to /local/data/boinc/
[2026-02-07 06:31:04] 2026-02-07 05:30:27,700 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6997901554/log.48466714._000317.job.log.tgz.1 /local/data/boinc/slots/0/log.48466714._0003
[2026-02-07 06:31:04] 2026-02-07 05:30:27,718 | INFO     | adding to output.list: log.48466714._000317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/13/log.48466714._000317.job.log.tg
[2026-02-07 06:31:04] 2026-02-07 05:30:27,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 06:31:04] 2026-02-07 05:30:27,719 | INFO     | summary of transferred files:
[2026-02-07 06:31:04] 2026-02-07 05:30:27,719 | INFO     |  -- lfn=log.48466714._000317.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 06:31:04] 2026-02-07 05:30:27,719 | INFO     | stage-out finished correctly
[2026-02-07 06:31:04] 2026-02-07 05:30:29,018 | INFO     | time since job start (4193s) is within the limit (349056.0s)
[2026-02-07 06:31:04] 2026-02-07 05:30:29,519 | INFO     | monitor loop #324: job 0:6997901554 is in state 'finished'
[2026-02-07 06:31:04] 2026-02-07 05:30:29,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 06:31:04] 2026-02-07 05:30:31,025 | INFO     | time since job start (4195s) is within the limit (349056.0s)
[2026-02-07 06:31:04] 2026-02-07 05:30:31,030 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 06:31:04] 2026-02-07 05:30:32,023 | INFO     | monitor loop #325: job 0:6997901554 is in state 'finished'
[2026-02-07 06:31:04] 2026-02-07 05:30:32,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,664 | INFO     | job 6997901554 has state=finished
[2026-02-07 06:31:04] 2026-02-07 05:30:32,664 | INFO     | preparing for final server update for job 6997901554 in state='finished'
[2026-02-07 06:31:04] 2026-02-07 05:30:32,664 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6997901554/jobReport.json
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | this job has now completed (state=finished)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | log transfer has been attempted: DONE
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | job 6997901554 has finished - writing final server update
[2026-02-07 06:31:04] 2026-02-07 05:30:32,666 | INFO     | total number of processed events: 400 (read)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6997901554/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | INFO     | extracted standard info from prmon json
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 06:31:04] 2026-02-07 05:30:32,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 06:31:04] 2026-02-07 05:30:32,669 | INFO     | fitting pss+swap vs Time
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | sum of square deviations: 73882315.5
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | sum of deviations: -8010152475.0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | mean x: 1770440220.5
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | mean y: 2586294.64516129
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | intersect: 191949685111.24387
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | chi2: 0.03583463990689403
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | current memory leak: -108.42 B/s (using 62 data points, chi2=0.04)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | could have reported an average CPU frequency of 3139 MHz (6 samples)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | ..............................
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . Timing measurements:
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . get job = 0 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . initial setup = 4 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . payload setup = 4 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . stage-in = 0 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . payload execution = 4171 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . stage-out = 0 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | . log creation = 0 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,670 | INFO     | ..............................
[2026-02-07 06:31:04] 2026-02-07 05:30:32,705 | INFO     | 
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | job summary report
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | --------------------------------------------------
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | PanDA job id: 6997901554
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | task id: 48466714
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | errors: (none)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | pilot state: finished 
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | transexitcode: 0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | exeerrorcode: 0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | exeerrordiag: 
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | exitcode: 0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | exitmsg: OK
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | cpuconsumptiontime: 15826 s
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | nevents: 400
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | neventsw: 0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | pid: 50677
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | pgrp: 50677
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | corecount: 4
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | event service: False
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | sizes: {0: 2283051, 10: 2283051, 4179: 2309222, 4181: 2318226, 4184: 2318282, 4186: 2318476}
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | --------------------------------------------------
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | 
[2026-02-07 06:31:04] 2026-02-07 05:30:32,706 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-07 06:31:04] 2026-02-07 05:30:32,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,725 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,725 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,725 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | job 6997901554 has completed (purged errors)
[2026-02-07 06:31:04] 2026-02-07 05:30:32,726 | INFO     | overall cleanup function is called
[2026-02-07 06:31:04] 2026-02-07 05:30:33,733 | INFO     | --- collectZombieJob: --- 10, [50677]
[2026-02-07 06:31:04] 2026-02-07 05:30:33,733 | INFO     | zombie collector waiting for pid 50677
[2026-02-07 06:31:04] 2026-02-07 05:30:33,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 06:31:04] 2026-02-07 05:30:33,733 | INFO     | collected zombie processes
[2026-02-07 06:31:04] 2026-02-07 05:30:33,733 | INFO     | will attempt to kill all subprocesses of pid=50677
[2026-02-07 06:31:04] 2026-02-07 05:30:33,776 | INFO     | process IDs to be killed: [50677] (in reverse order)
[2026-02-07 06:31:04] 2026-02-07 05:30:33,808 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 06:31:04] 2026-02-07 05:30:33,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 06:31:04] 2026-02-07 05:30:33,810 | INFO     | did not find any defunct processes belonging to 50677
[2026-02-07 06:31:04] 2026-02-07 05:30:33,811 | INFO     | did not find any defunct processes belonging to 50677
[2026-02-07 06:31:04] 2026-02-07 05:30:33,811 | INFO     | ready for new job
[2026-02-07 06:31:04] 2026-02-07 05:30:33,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 06:31:04] 2026-02-07 05:30:33,812 | INFO     | **************************************
[2026-02-07 06:31:04] 2026-02-07 05:30:33,812 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 06:31:04] 2026-02-07 05:30:33,812 | INFO     | **************************************
[2026-02-07 06:31:04] 2026-02-07 05:30:33,812 | INFO     | 
[2026-02-07 06:31:04] 2026-02-07 05:30:33,813 | INFO     | architecture information:
[2026-02-07 06:31:04] 2026-02-07 05:30:33,813 | INFO     | executing command: cat /etc/os-release
[2026-02-07 06:31:04] 2026-02-07 05:30:33,827 | INFO     | cat /etc/os-release:
[2026-02-07 06:31:04] NAME="CentOS Linux"
[2026-02-07 06:31:04] VERSION="7 (Core)"
[2026-02-07 06:31:04] ID="centos"
[2026-02-07 06:31:04] ID_LIKE="rhel fedora"
[2026-02-07 06:31:04] VERSION_ID="7"
[2026-02-07 06:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 06:31:04] ANSI_COLOR="0;31"
[2026-02-07 06:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 06:31:04] HOME_URL="https://www.centos.org/"
[2026-02-07 06:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 06:31:04] 
[2026-02-07 06:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 06:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 06:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 06:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 06:31:04] 
[2026-02-07 06:31:04] 2026-02-07 05:30:33,827 | INFO     | **************************************
[2026-02-07 06:31:04] 2026-02-07 05:30:34,330 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | INFO     | sufficient remaining disk space (230817792000 B)
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | INFO     | update_server=False
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 06:31:04] 2026-02-07 05:30:34,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:31:04] 2026-02-07 05:30:34,527 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 06:31:04] 2026-02-07 05:30:34,527 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 06:31:04] 2026-02-07 05:30:34,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:31:04] 2026-02-07 05:30:34,528 | INFO     | will abort loop
[2026-02-07 06:31:04] 2026-02-07 05:30:34,919 | INFO     | all data control threads have been joined
[2026-02-07 06:31:04] 2026-02-07 05:30:35,002 | INFO     | all payload control threads have been joined
[2026-02-07 06:31:04] 2026-02-07 05:30:35,354 | INFO     | [job] retrieve thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:35,355 | INFO     | [job] queue monitor thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:35,533 | INFO     | [job] job monitor thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:35,538 | INFO     | [payload] validate_post thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:35,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 06:31:04] 2026-02-07 05:30:35,925 | INFO     | [data] control thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:35,989 | INFO     | all job control threads have been joined
[2026-02-07 06:31:04] 2026-02-07 05:30:35,993 | INFO     | [payload] failed_post thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,004 | INFO     | [payload] control thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,281 | INFO     | [job] validate thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,347 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,469 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,505 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,562 | INFO     | [data] copytool_in thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:36,994 | INFO     | [job] control thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:37,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 06:31:04] 2026-02-07 05:30:37,774 | INFO     | [data] copytool_out thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:41,082 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:41,372 | INFO     | [monitor] cgroup control has ended
[2026-02-07 06:31:04] 2026-02-07 05:30:44,439 | INFO     | job.realtimelogging is not enabled
[2026-02-07 06:31:04] 2026-02-07 05:30:45,445 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 06:31:04] 2026-02-07 05:30:46,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541919512384)>', '<ExcThread(monitor, started 140541127816960)>']
[2026-02-07 06:31:04] 2026-02-07 05:30:51,612 | INFO     | all workflow threads have been joined
[2026-02-07 06:31:04] 2026-02-07 05:30:51,612 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 06:31:04] 2026-02-07 05:30:51,612 | INFO     | traces error code: 0
[2026-02-07 06:31:04] 2026-02-07 05:30:51,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 06:31:04] 2026-02-07 05:31:04,143 | INFO     | PID=46154 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 06:31:04] 2026-02-07 05:31:04,144 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 06:31:04] 2026-02-07 05:31:04,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 06:31:04] 2026-02-07 05:31:04,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 06:31:04] 2026-02-07 05:31:04,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 06:31:04] 2026-02-07 05:31:04,144 | INFO     | [monitor] control thread has ended
[2026-02-07 06:31:04] 2026-02-07 05:31:04,217 [wrapper] ==== pilot stdout END ====
[2026-02-07 06:31:04] 2026-02-07 05:31:04,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 06:31:04] 2026-02-07 05:31:04,225 [wrapper] pilotpid: 46154
[2026-02-07 06:31:04] 2026-02-07 05:31:04,229 [wrapper] Pilot exit status: 0
[2026-02-07 06:31:04] 2026-02-07 05:31:04,241 [wrapper] pandaids: 6997901554
[2026-02-07 06:31:04] 2026-02-07 05:31:04,263 [wrapper] cleanup supervisor_pilot   55764 46155
[2026-02-07 06:31:04] 2026-02-07 05:31:04,266 [wrapper] Test setup, not cleaning
[2026-02-07 06:31:04] 2026-02-07 05:31:04,270 [wrapper] apfmon messages muted
[2026-02-07 06:31:04] 2026-02-07 05:31:04,274 [wrapper] ==== wrapper stdout END ====
[2026-02-07 06:31:04] 2026-02-07 05:31:04,278 [wrapper] ==== wrapper stderr END ====
[2026-02-07 06:31:04]  *** Error codes and diagnostics ***
[2026-02-07 06:31:04]     "exeErrorCode": 0,
[2026-02-07 06:31:04]     "exeErrorDiag": "",
[2026-02-07 06:31:04]     "pilotErrorCode": 0,
[2026-02-07 06:31:04]     "pilotErrorDiag": "",
[2026-02-07 06:31:04]  *** Listing of results directory ***
[2026-02-07 06:31:04] total 716348
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc    584627 Feb  6 13:12 pilot3.tar.gz
[2026-02-07 06:31:04] -rwx------ 1 boinc boinc     36322 Feb  6 13:15 runpilot2-wrapper.sh
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc      5111 Feb  6 13:16 queuedata.json
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc       100 Feb  7 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 06:31:04] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 05:20 run_atlas
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc       105 Feb  7 05:20 job.xml
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc 533020688 Feb  7 05:20 EVNT.48466711._000005.pool.root.1
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc    597937 Feb  7 05:20 input.tar.gz
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:20 start_atlas.sh
[2026-02-07 06:31:04] drwxrwx--x 2 boinc boinc      4096 Feb  7 05:20 shared
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc         0 Feb  7 05:20 boinc_setup_complete
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc      6453 Feb  7 05:20 init_data.xml
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc         0 Feb  7 05:20 boinc_lockfile
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc      2495 Feb  7 05:20 pandaJob.out
[2026-02-07 06:31:04] -rw------- 1 boinc boinc   1009504 Feb  7 05:20 agis_schedconf.cvmfs.json
[2026-02-07 06:31:04] -rw------- 1 boinc boinc   1513088 Feb  7 05:20 agis_ddmendpoints.agis.ALL.json
[2026-02-07 06:31:04] -rw------- 1 boinc boinc       428 Feb  7 05:20 workernode_map.json
[2026-02-07 06:31:04] drwx------ 5 boinc boinc      4096 Feb  7 05:20 pilot3
[2026-02-07 06:31:04] -rw------- 1 boinc boinc 194816577 Feb  7 06:30 HITS.48466714._000317.pool.root.1
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc       530 Feb  7 06:30 boinc_task_state.xml
[2026-02-07 06:31:04] -rw------- 1 boinc boinc      1021 Feb  7 06:30 memory_monitor_summary.json
[2026-02-07 06:31:04] -rw------- 1 boinc boinc    261989 Feb  7 06:30 log.48466714._000317.job.log.tgz.1
[2026-02-07 06:31:04] -rw------- 1 boinc boinc      6313 Feb  7 06:30 heartbeat.json
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc        27 Feb  7 06:30 wrapper_checkpoint.txt
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc      8192 Feb  7 06:30 boinc_mmap_file
[2026-02-07 06:31:04] -rw------- 1 boinc boinc       745 Feb  7 06:31 pilotlog.txt
[2026-02-07 06:31:04] -rw------- 1 boinc boinc        95 Feb  7 06:31 pilot_heartbeat.json
[2026-02-07 06:31:04] -rw------- 1 boinc boinc    621913 Feb  7 06:31 log.48466714._000317.job.log.1
[2026-02-07 06:31:04] -rw------- 1 boinc boinc       357 Feb  7 06:31 output.list
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc       620 Feb  7 06:31 runtime_log
[2026-02-07 06:31:04] -rw------- 1 boinc boinc    901120 Feb  7 06:31 result.tar.gz
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc      8901 Feb  7 06:31 runtime_log.err
[2026-02-07 06:31:04] -rw------- 1 boinc boinc       658 Feb  7 06:31 qx1NDmyuZ88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmczYKDmbPYlom.diag
[2026-02-07 06:31:04] -rw-r--r-- 1 boinc boinc     21442 Feb  7 06:31 stderr.txt
[2026-02-07 06:31:04] HITS file was successfully produced:
[2026-02-07 06:31:04] -rw------- 1 boinc boinc 194816577 Feb  7 06:30 shared/HITS.pool.root.1
[2026-02-07 06:31:04]  *** Contents of shared directory: ***
[2026-02-07 06:31:04] total 712272
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc 533020688 Feb  7 05:20 ATLAS.root_0
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc    597937 Feb  7 05:20 input.tar.gz
[2026-02-07 06:31:04] -rw-r--r-- 2 boinc boinc     15845 Feb  7 05:20 start_atlas.sh
[2026-02-07 06:31:04] -rw------- 1 boinc boinc 194816577 Feb  7 06:30 HITS.pool.root.1
[2026-02-07 06:31:04] -rw------- 1 boinc boinc    901120 Feb  7 06:31 result.tar.gz
06:31:05 (42036): run_atlas exited; CPU time 15844.520822
06:31:05 (42036): called boinc_finish(0)

</stderr_txt>
]]>

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