Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:39:21 (3151321): wrapper (7.7.26015): starting
08:39:21 (3151321): wrapper: running run_atlas (--nthreads 3)
[2026-02-07 08:39:21] Arguments: --nthreads 3
[2026-02-07 08:39:21] Threads: 3
[2026-02-07 08:39:21] Checking for CVMFS
[2026-02-07 08:39:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 08:39:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 08:39:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 08:39:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 08:39:22] 2.9.2.0 2953292 1445 62992 155976 2 50 25046714 36864001 0 130560 0 563515 99.980 60210 22720 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 08:39:22] CVMFS is ok
[2026-02-07 08:39:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 08:39:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 08:39:22] Further information can be found at the LHC@home message board.
[2026-02-07 08:39:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 08:39:22] Checking for apptainer binary...
[2026-02-07 08:39:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 08:39:22] Running /usr/bin/apptainer --version
[2026-02-07 08:39:22] apptainer version 1.4.1-1.1
[2026-02-07 08:39:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 08:39:22] thA333
[2026-02-07 08:39:22] apptainer works
[2026-02-07 08:39:22] Set ATHENA_PROC_NUMBER=3
[2026-02-07 08:39:22] Set ATHENA_CORE_NUMBER=3
[2026-02-07 08:39:22] Starting ATLAS job with PandaID=7004058870
[2026-02-07 08:39:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 10:51:58]  *** The last 200 lines of the pilot log: ***
[2026-02-07 10:51:58] 
[2026-02-07 10:51:58] 2026-02-07 09:51:22,929 | INFO     | **************************************
[2026-02-07 10:51:58] 2026-02-07 09:51:23,152 | WARNING  | process 3159794 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 10:51:58] 2026-02-07 09:51:23,179 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 10:51:58] 2026-02-07 09:51:23,211 | INFO     | number of running child processes to parent process 3159794: 1
[2026-02-07 10:51:58] 2026-02-07 09:51:23,211 | INFO     | maximum number of monitored processes: 6
[2026-02-07 10:51:58] 2026-02-07 09:51:23,211 | INFO     | aborting job monitoring since job object (job id=7004058870) has expired
[2026-02-07 10:51:58] 2026-02-07 09:51:23,433 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | INFO     | sufficient remaining disk space (231136559104 B)
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | INFO     | update_server=False
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 10:51:58] 2026-02-07 09:51:23,446 | INFO     | will abort loop
[2026-02-07 10:51:58] 2026-02-07 09:51:23,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 10:51:58] 2026-02-07 09:51:23,476 | INFO     | all data control threads have been joined
[2026-02-07 10:51:58] 2026-02-07 09:51:23,774 | INFO     | all payload control threads have been joined
[2026-02-07 10:51:58] 2026-02-07 09:51:24,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 10:51:58] 2026-02-07 09:51:24,452 | INFO     | [job] retrieve thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,452 | INFO     | [job] job monitor thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,452 | INFO     | [job] queue monitor thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,482 | INFO     | [data] control thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,539 | INFO     | [data] copytool_in thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,780 | INFO     | [payload] control thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:24,900 | INFO     | all job control threads have been joined
[2026-02-07 10:51:58] 2026-02-07 09:51:25,020 | INFO     | [payload] failed_post thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,245 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,627 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,774 | INFO     | [payload] validate_post thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,791 | INFO     | [job] validate thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,807 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:25,906 | INFO     | [job] control thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:26,022 | INFO     | [data] copytool_out thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:27,453 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 10:51:58] 2026-02-07 09:51:52,943 | INFO     | [monitor] cgroup control has ended
[2026-02-07 10:51:58] 2026-02-07 09:51:53,099 | INFO     | PID=3155362 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 10:51:58] 2026-02-07 09:51:53,099 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 10:51:58] 2026-02-07 09:51:53,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 10:51:58] 2026-02-07 09:51:53,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 10:51:58] 2026-02-07 09:51:53,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812270835520)>', '<ExcThread(monitor, started 139811176310528)>']
[2026-02-07 10:51:58] 2026-02-07 09:51:54,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 10:51:58] 2026-02-07 09:51:54,105 | INFO     | [monitor] control thread has ended
[2026-02-07 10:51:58] 2026-02-07 09:51:58,848 | INFO     | all workflow threads have been joined
[2026-02-07 10:51:58] 2026-02-07 09:51:58,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 10:51:58] 2026-02-07 09:51:58,849 | INFO     | traces error code: 0
[2026-02-07 10:51:58] 2026-02-07 09:51:58,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 10:51:58] 2026-02-07 09:51:58,895 [wrapper] ==== pilot stdout END ====
[2026-02-07 10:51:58] 2026-02-07 09:51:58,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 10:51:58] 2026-02-07 09:51:58,901 [wrapper] pilotpid: 3155362
[2026-02-07 10:51:58] 2026-02-07 09:51:58,904 [wrapper] Pilot exit status: 0
[2026-02-07 10:51:58] 2026-02-07 09:51:58,911 [wrapper] pandaids: 7004058870
[2026-02-07 10:51:58] 2026-02-07 09:51:58,928 [wrapper] cleanup supervisor_pilot 3165323 3155363
[2026-02-07 10:51:58] 2026-02-07 09:51:58,930 [wrapper] Test setup, not cleaning
[2026-02-07 10:51:58] 2026-02-07 09:51:58,934 [wrapper] apfmon messages muted
[2026-02-07 10:51:58] 2026-02-07 09:51:58,936 [wrapper] ==== wrapper stdout END ====
[2026-02-07 10:51:58] 2026-02-07 09:51:58,939 [wrapper] ==== wrapper stderr END ====
[2026-02-07 10:51:58]  *** Error codes and diagnostics ***
[2026-02-07 10:51:58]     "exeErrorCode": 0,
[2026-02-07 10:51:58]     "exeErrorDiag": "",
[2026-02-07 10:51:58]     "pilotErrorCode": 0,
[2026-02-07 10:51:58]     "pilotErrorDiag": "",
[2026-02-07 10:51:58]  *** Listing of results directory ***
[2026-02-07 10:51:58] total 936248
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-07 10:51:58] -rwx------ 1 boinc boinc     36322 Feb  6 18:00 runpilot2-wrapper.sh
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      5111 Feb  6 18:00 queuedata.json
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc       100 Feb  7 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 10:51:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 08:39 run_atlas
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc       105 Feb  7 08:39 job.xml
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc 672544541 Feb  7 08:39 EVNT.48431094._000285.pool.root.1
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc    597957 Feb  7 08:39 input.tar.gz
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc     15845 Feb  7 08:39 start_atlas.sh
[2026-02-07 10:51:58] drwxrwx--x 2 boinc boinc      4096 Feb  7 08:39 shared
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc         0 Feb  7 08:39 boinc_setup_complete
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      6197 Feb  7 08:39 init_data.xml
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc         0 Feb  7 08:39 boinc_lockfile
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      2554 Feb  7 08:39 pandaJob.out
[2026-02-07 10:51:58] -rw------- 1 boinc boinc   1009504 Feb  7 08:39 agis_schedconf.cvmfs.json
[2026-02-07 10:51:58] -rw------- 1 boinc boinc   1513088 Feb  7 08:39 agis_ddmendpoints.agis.ALL.json
[2026-02-07 10:51:58] -rw------- 1 boinc boinc       419 Feb  7 08:39 workernode_map.json
[2026-02-07 10:51:58] drwx------ 5 boinc boinc      4096 Feb  7 08:39 pilot3
[2026-02-07 10:51:58] -rw------- 1 boinc boinc 279326022 Feb  7 10:50 HITS.48431096._006829.pool.root.1
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc       530 Feb  7 10:50 boinc_task_state.xml
[2026-02-07 10:51:58] -rw------- 1 boinc boinc        95 Feb  7 10:51 pilot_heartbeat.json
[2026-02-07 10:51:58] -rw------- 1 boinc boinc      1018 Feb  7 10:51 memory_monitor_summary.json
[2026-02-07 10:51:58] -rw------- 1 boinc boinc    328612 Feb  7 10:51 log.48431096._006829.job.log.tgz.1
[2026-02-07 10:51:58] -rw------- 1 boinc boinc      6299 Feb  7 10:51 heartbeat.json
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      8192 Feb  7 10:51 boinc_mmap_file
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc        27 Feb  7 10:51 wrapper_checkpoint.txt
[2026-02-07 10:51:58] -rw------- 1 boinc boinc      5272 Feb  7 10:51 pilotlog.txt
[2026-02-07 10:51:58] -rw------- 1 boinc boinc   1133105 Feb  7 10:51 log.48431096._006829.job.log.1
[2026-02-07 10:51:58] -rw------- 1 boinc boinc       357 Feb  7 10:51 output.list
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc       620 Feb  7 10:51 runtime_log
[2026-02-07 10:51:58] -rw------- 1 boinc boinc   1474560 Feb  7 10:51 result.tar.gz
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      8896 Feb  7 10:51 runtime_log.err
[2026-02-07 10:51:58] -rw------- 1 boinc boinc       657 Feb  7 10:51 Tt1NDm3Me88n9Rq4apOajLDm4fhM0noT9bVooX4SDm81YKDmpYCe6m.diag
[2026-02-07 10:51:58] -rw-r--r-- 1 boinc boinc      8617 Feb  7 10:51 stderr.txt
[2026-02-07 10:51:58] HITS file was successfully produced:
[2026-02-07 10:51:58] -rw------- 1 boinc boinc 279326022 Feb  7 10:50 shared/HITS.pool.root.1
[2026-02-07 10:51:58]  *** Contents of shared directory: ***
[2026-02-07 10:51:58] total 931612
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc 672544541 Feb  7 08:39 ATLAS.root_0
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc    597957 Feb  7 08:39 input.tar.gz
[2026-02-07 10:51:58] -rw-r--r-- 2 boinc boinc     15845 Feb  7 08:39 start_atlas.sh
[2026-02-07 10:51:58] -rw------- 1 boinc boinc 279326022 Feb  7 10:50 HITS.pool.root.1
[2026-02-07 10:51:58] -rw------- 1 boinc boinc   1474560 Feb  7 10:51 result.tar.gz
10:52:00 (3151321): run_atlas exited; CPU time 23013.119926
10:52:00 (3151321): called boinc_finish(0)

</stderr_txt>
]]>

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