Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:54:37 (2760943): wrapper (7.7.26015): starting
12:54:37 (2760943): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 12:54:37] Arguments: --nthreads 12
[2026-02-06 12:54:37] Threads: 12
[2026-02-06 12:54:37] Checking for CVMFS
[2026-02-06 12:54:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 12:54:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 12:54:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 12:54:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 12:54:39] 2.11.3.0 1262301 97420 217136 155959 0 420 42338985 45568000 21689 130560 0 940215629 99.814 541034761 18635 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 12:54:39] CVMFS is ok
[2026-02-06 12:54:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 12:54:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 12:54:39] Further information can be found at the LHC@home message board.
[2026-02-06 12:54:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 12:54:39] Checking for apptainer binary...
[2026-02-06 12:54:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 12:54:39] Running /usr/bin/apptainer --version
[2026-02-06 12:54:39] apptainer version 1.4.1-1.el9
[2026-02-06 12:54:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 12:54:39] wns0169.triumf.lcg
[2026-02-06 12:54:39] apptainer works
[2026-02-06 12:54:39] Set ATHENA_PROC_NUMBER=12
[2026-02-06 12:54:39] Set ATHENA_CORE_NUMBER=12
[2026-02-06 12:54:39] Starting ATLAS job with PandaID=7004057984
[2026-02-06 12:54:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 12:59:21]  *** The last 200 lines of the pilot log: ***
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | found no stored workdir sizes
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | WARNING  | wrong length of table data, x=[1770411349.0], y=[874.0] (must be same and length>=4)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | could have reported an average CPU frequency of 2884 MHz (4 samples)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . Timing measurements:
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . get job = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . initial setup = 16 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload setup = 12 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-in = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload execution = 30 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-out = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . log creation = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057984/pilotlog.txt
[2026-02-06 12:59:21] 2026-02-06 20:58:13,847 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 12:59:21] - Log from pilotlog.txt -
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | found no stored workdir sizes
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | WARNING  | wrong length of table data, x=[1770411349.0], y=[874.0] (must be same and length>=4)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | could have reported an average CPU frequency of 2884 MHz (4 samples)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . Timing measurements:
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . get job = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . initial setup = 16 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload setup = 12 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-in = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload execution = 30 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-out = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . log creation = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057984/pilotlog.txt
[2026-02-06 12:59:21] 2026-02-06 20:58:13,848 | WARNING  | 
[2026-02-06 12:59:21] [begin log extracts]
[2026-02-06 12:59:21] - Log from pilotlog.txt -
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:59:21] 2026-02-06 20:58:13,719 | WARNING  | found no stored workdir sizes
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | WARNING  | wrong length of table data, x=[1770411349.0], y=[874.0] (must be same and length>=4)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | could have reported an average CPU frequency of 2884 MHz (4 samples)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . Timing measurements:
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . get job = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . initial setup = 16 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload setup = 12 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-in = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . payload execution = 30 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . stage-out = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,720 | INFO     | . log creation = 0 s
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | ..............................
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:59:21] 2026-02-06 20:58:13,721 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057984/pilotlog.txt
[2026-02-06 12:59:21] [end log extracts]
[2026-02-06 12:59:21] 2026-02-06 20:58:13,848 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 12:59:21] 2026-02-06 20:58:13,848 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 12:59:21] 2026-02-06 20:58:14,081 | INFO     | 
[2026-02-06 12:59:21] 2026-02-06 20:58:14,081 | INFO     | job summary report
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | --------------------------------------------------
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | PanDA job id: 7004057984
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | task id: 48431096
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 12:56:03,724 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | pilot state: failed 
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | transexitcode: 65
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | exeerrorcode: 65
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | exitcode: 65
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | cpuconsumptiontime: 12 s
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | nevents: 0
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | neventsw: 0
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | pid: 2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | pgrp: 2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | corecount: 12
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | event service: False
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | sizes: {0: 2283079, 11: 2283079, 46: 2306336, 48: 2310628, 49: 2310656, 168: 2310822}
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | --------------------------------------------------
[2026-02-06 12:59:21] 2026-02-06 20:58:14,082 | INFO     | 
[2026-02-06 12:59:21] 2026-02-06 20:58:14,083 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,186 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 12:59:21] 2026-02-06 20:58:14,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,186 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 12:59:21] 2026-02-06 20:58:14,186 | INFO     | job 7004057984 has completed (purged errors)
[2026-02-06 12:59:21] 2026-02-06 20:58:14,186 | INFO     | overall cleanup function is called
[2026-02-06 12:59:21] 2026-02-06 20:58:15,196 | INFO     | --- collectZombieJob: --- 10, [2782244]
[2026-02-06 12:59:21] 2026-02-06 20:58:15,196 | INFO     | zombie collector waiting for pid 2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:15,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 12:59:21] 2026-02-06 20:58:15,196 | INFO     | collected zombie processes
[2026-02-06 12:59:21] 2026-02-06 20:58:15,197 | INFO     | will attempt to kill all subprocesses of pid=2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:15,741 | INFO     | PID=2767966 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 12:59:21] 2026-02-06 20:58:15,741 | INFO     | .. there are 35 such processes running
[2026-02-06 12:59:21] 2026-02-06 20:58:15,767 | INFO     | process IDs to be killed: [2782244] (in reverse order)
[2026-02-06 12:59:21] 2026-02-06 20:58:15,841 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 12:59:21] 2026-02-06 20:58:15,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 12:59:21] 2026-02-06 20:58:15,848 | INFO     | did not find any defunct processes belonging to 2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:15,856 | INFO     | did not find any defunct processes belonging to 2782244
[2026-02-06 12:59:21] 2026-02-06 20:58:15,856 | INFO     | ready for new job
[2026-02-06 12:59:21] 2026-02-06 20:58:15,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 12:59:21] 2026-02-06 20:58:15,858 | INFO     | **************************************
[2026-02-06 12:59:21] 2026-02-06 20:58:15,858 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 12:59:21] 2026-02-06 20:58:15,858 | INFO     | **************************************
[2026-02-06 12:59:21] 2026-02-06 20:58:15,858 | INFO     | 
[2026-02-06 12:59:21] 2026-02-06 20:58:15,860 | INFO     | architecture information:
[2026-02-06 12:59:21] 2026-02-06 20:58:15,861 | INFO     | executing command: cat /etc/os-release
[2026-02-06 12:59:21] 2026-02-06 20:58:15,875 | INFO     | cat /etc/os-release:
[2026-02-06 12:59:21] NAME="CentOS Linux"
[2026-02-06 12:59:21] VERSION="7 (Core)"
[2026-02-06 12:59:21] ID="centos"
[2026-02-06 12:59:21] ID_LIKE="rhel fedora"
[2026-02-06 12:59:21] VERSION_ID="7"
[2026-02-06 12:59:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 12:59:21] ANSI_COLOR="0;31"
[2026-02-06 12:59:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 12:59:21] HOME_URL="https://www.centos.org/"
[2026-02-06 12:59:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 12:59:21] 
[2026-02-06 12:59:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 12:59:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 12:59:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 12:59:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 12:59:21] 
[2026-02-06 12:59:21] 2026-02-06 20:58:15,875 | INFO     | **************************************
[2026-02-06 12:59:21] 2026-02-06 20:58:16,378 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 12:59:21] 2026-02-06 20:58:16,396 | INFO     | sufficient remaining disk space (2427236384768 B)
[2026-02-06 12:59:21] 2026-02-06 20:58:16,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 12:59:21] 2026-02-06 20:58:16,397 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 12:59:21] 2026-02-06 20:58:16,397 | INFO     | update_server=False
[2026-02-06 12:59:21] 2026-02-06 20:58:16,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 12:59:21] 2026-02-06 20:58:16,399 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-06 12:59:21] 2026-02-06 20:58:16,399 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 12:59:21] 2026-02-06 20:58:16,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 12:59:21] 2026-02-06 20:58:16,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 12:59:21] 2026-02-06 20:58:16,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:59:21] 2026-02-06 20:58:16,908 | INFO     | aborting loop
[2026-02-06 12:59:21] 2026-02-06 20:58:17,096 | INFO     | all data control threads have been joined
[2026-02-06 12:59:21] 2026-02-06 20:58:17,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 12:59:21] 2026-02-06 20:58:17,391 | INFO     | all payload control threads have been joined
[2026-02-06 12:59:21] 2026-02-06 20:58:17,404 | INFO     | [job] retrieve thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:17,602 | INFO     | all job control threads have been joined
[2026-02-06 12:59:21] 2026-02-06 20:58:17,895 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:17,913 | INFO     | [job] job monitor thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,102 | INFO     | [data] control thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,341 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,344 | INFO     | [job] validate thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,353 | INFO     | [payload] failed_post thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,397 | INFO     | [payload] control thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,484 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,490 | INFO     | [payload] validate_post thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,533 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,608 | INFO     | [job] control thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,776 | INFO     | [data] copytool_in thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:18,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 12:59:21] 2026-02-06 20:58:19,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:59:21] 2026-02-06 20:58:19,186 | INFO     | [data] copytool_out thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:20,057 | INFO     | [job] queue monitor thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:58:22,925 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 12:59:21] 2026-02-06 20:59:14,555 | INFO     | [monitor] cgroup control has ended
[2026-02-06 12:59:21] 2026-02-06 20:59:15,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034437883712)>', '<ExcThread(monitor, started 140033231148800)>']
[2026-02-06 12:59:21] 2026-02-06 20:59:15,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 12:59:21] 2026-02-06 20:59:15,806 | INFO     | [monitor] control thread has ended
[2026-02-06 12:59:21] 2026-02-06 20:59:20,057 | INFO     | all workflow threads have been joined
[2026-02-06 12:59:21] 2026-02-06 20:59:20,057 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 12:59:21] 2026-02-06 20:59:20,058 | INFO     | traces error code: 0
[2026-02-06 12:59:21] 2026-02-06 20:59:20,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 12:59:21] 2026-02-06 20:59:20,535 [wrapper] ==== pilot stdout END ====
[2026-02-06 12:59:21] 2026-02-06 20:59:20,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 12:59:21] 2026-02-06 20:59:20,539 [wrapper] pilotpid: 2767966
[2026-02-06 12:59:21] 2026-02-06 20:59:20,540 [wrapper] Pilot exit status: 0
[2026-02-06 12:59:21] 2026-02-06 20:59:20,636 [wrapper] pandaids: 7004057984
[2026-02-06 12:59:21] 2026-02-06 20:59:21,045 [wrapper] cleanup supervisor_pilot 2767988 2767967
[2026-02-06 12:59:21] 2026-02-06 20:59:21,071 [wrapper] Test setup, not cleaning
[2026-02-06 12:59:21] 2026-02-06 20:59:21,104 [wrapper] apfmon messages muted
[2026-02-06 12:59:21] 2026-02-06 20:59:21,143 [wrapper] ==== wrapper stdout END ====
[2026-02-06 12:59:21] 2026-02-06 20:59:21,170 [wrapper] ==== wrapper stderr END ====
[2026-02-06 12:59:21]  *** Error codes and diagnostics ***
[2026-02-06 12:59:21]     "exeErrorCode": 65,
[2026-02-06 12:59:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 12:59:21]     "pilotErrorCode": 1305,
[2026-02-06 12:59:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 12:59:21]  *** Listing of results directory ***
[2026-02-06 12:59:21] total 664412
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc    584627 Feb  6 08:59 pilot3.tar.gz
[2026-02-06 12:59:21] -rwx------. 1 boinc boinc     36322 Feb  6 09:00 runpilot2-wrapper.sh
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc      5111 Feb  6 09:00 queuedata.json
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc       100 Feb  6 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 12:59:21] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 12:54 run_atlas
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc       105 Feb  6 12:54 job.xml
[2026-02-06 12:59:21] -rw-r--r--. 2 boinc boinc     15845 Feb  6 12:54 start_atlas.sh
[2026-02-06 12:59:21] drwxrwx--x. 2 boinc boinc      4096 Feb  6 12:54 shared
[2026-02-06 12:59:21] -rw-r--r--. 2 boinc boinc    597956 Feb  6 12:54 input.tar.gz
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc      6627 Feb  6 12:54 init_data.xml
[2026-02-06 12:59:21] -rw-r--r--. 2 boinc boinc 676215904 Feb  6 12:54 EVNT.48431094._000278.pool.root.1
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc         0 Feb  6 12:54 boinc_lockfile
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc      2554 Feb  6 12:54 pandaJob.out
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc   1009520 Feb  6 12:54 agis_schedconf.cvmfs.json
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc   1513088 Feb  6 12:54 agis_ddmendpoints.agis.ALL.json
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc       445 Feb  6 12:55 workernode_map.json
[2026-02-06 12:59:21] drwx------. 5 boinc boinc      4096 Feb  6 12:55 pilot3
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc       522 Feb  6 12:56 boinc_task_state.xml
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc       957 Feb  6 12:56 memory_monitor_summary.json
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc     21064 Feb  6 12:56 log.48431096._006478.job.log.tgz.1
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc        95 Feb  6 12:58 pilot_heartbeat.json
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc      7041 Feb  6 12:58 heartbeat.json
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc      8192 Feb  6 12:59 boinc_mmap_file
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc        22 Feb  6 12:59 wrapper_checkpoint.txt
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc      4547 Feb  6 12:59 pilotlog.txt
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc     82183 Feb  6 12:59 log.48431096._006478.job.log.1
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc       188 Feb  6 12:59 output.list
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc       620 Feb  6 12:59 runtime_log
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc    122880 Feb  6 12:59 result.tar.gz
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc      8635 Feb  6 12:59 runtime_log.err
[2026-02-06 12:59:21] -rw-------. 1 boinc boinc       642 Feb  6 12:59 ENtLDmgMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqNZKDmeFK1Co.diag
[2026-02-06 12:59:21] -rw-r--r--. 1 boinc boinc     17230 Feb  6 12:59 stderr.txt
[2026-02-06 12:59:22] No HITS result produced
[2026-02-06 12:59:22]  *** Contents of shared directory: ***
[2026-02-06 12:59:22] total 661092
[2026-02-06 12:59:22] -rw-r--r--. 2 boinc boinc     15845 Feb  6 12:54 start_atlas.sh
[2026-02-06 12:59:22] -rw-r--r--. 2 boinc boinc    597956 Feb  6 12:54 input.tar.gz
[2026-02-06 12:59:22] -rw-r--r--. 2 boinc boinc 676215904 Feb  6 12:54 ATLAS.root_0
[2026-02-06 12:59:22] -rw-------. 1 boinc boinc    122880 Feb  6 12:59 result.tar.gz
12:59:23 (2760943): run_atlas exited; CPU time 16.889646
12:59:23 (2760943): called boinc_finish(0)

</stderr_txt>
]]>

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