Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:43 (520377): wrapper (7.7.26015): starting
12:31:43 (520377): wrapper: running run_atlas (--nthreads 10)
[2026-02-06 12:31:43] Arguments: --nthreads 10
[2026-02-06 12:31:43] Threads: 10
[2026-02-06 12:31:43] Checking for CVMFS
[2026-02-06 12:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 12:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 12:31:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 12:31:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 12:31:43] 2.13.3.0 16090 133985 600012 155955 1 386 16779802 32935937 28883 16776704 0 1362080494 99.563 1553378459 52912 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-06 12:31:43] CVMFS is ok
[2026-02-06 12:31:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 12:31:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 12:31:43] Further information can be found at the LHC@home message board.
[2026-02-06 12:31:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 12:31:43] Checking for apptainer binary...
[2026-02-06 12:31:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 12:31:43] Running /usr/bin/apptainer --version
[2026-02-06 12:31:43] apptainer version 1.4.5-2.el9
[2026-02-06 12:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 12:31:44] c7-9-15.aglt2.org
[2026-02-06 12:31:44] apptainer works
[2026-02-06 12:31:44] Set ATHENA_PROC_NUMBER=10
[2026-02-06 12:31:44] Set ATHENA_CORE_NUMBER=10
[2026-02-06 12:31:44] Starting ATLAS job with PandaID=6996349152
[2026-02-06 12:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 14:15:35]  *** The last 200 lines of the pilot log: ***
[2026-02-06 14:15:35] 2026-02-06 19:14:24,094 | INFO     | preparing for final server update for job 6996349152 in state='finished'
[2026-02-06 14:15:35] 2026-02-06 19:14:24,321 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,321 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6996349152/jobReport.json
[2026-02-06 14:15:35] 2026-02-06 19:14:24,322 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-02-06 14:15:35] 2026-02-06 19:14:24,322 | INFO     | this job has now completed (state=finished)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,322 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,323 | INFO     | log transfer has been attempted: DONE
[2026-02-06 14:15:35] 2026-02-06 19:14:24,323 | INFO     | job 6996349152 has finished - writing final server update
[2026-02-06 14:15:35] 2026-02-06 19:14:24,323 | INFO     | total number of processed events: 400 (read)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,353 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6996349152/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,362 | INFO     | extracted standard info from prmon json
[2026-02-06 14:15:35] 2026-02-06 19:14:24,362 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 14:15:35] 2026-02-06 19:14:24,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 14:15:35] 2026-02-06 19:14:24,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 14:15:35] 2026-02-06 19:14:24,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 14:15:35] 2026-02-06 19:14:24,366 | INFO     | fitting pss+swap vs Time
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | sum of square deviations: 310043005.3100001
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | sum of deviations: 9378219037.340004
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | mean x: 1770402185.63
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | mean y: 2544723.82
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | intersect: -53548798788.744316
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | chi2: 3.08542435167577
[2026-02-06 14:15:35] 2026-02-06 19:14:24,367 | INFO     | sum of square deviations: 265822885.2210522
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | sum of deviations: 15518123324.294731
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | mean x: 1770402033.136842
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | mean y: 2564977.515789474
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | intersect: -103349398345.55725
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | chi2: 2.398220593673444
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | current chi2=2.398220593673444 (change=22.272584891899513 %)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | right removable region: 94
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | sum of square deviations: 265814955.2210522
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | sum of deviations: -12036186088.831577
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | mean x: 1770402338.136842
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | mean y: 2617256.294736842
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | intersect: 80167000694.37874
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | chi2: 0.7539406090674639
[2026-02-06 14:15:35] 2026-02-06 19:14:24,368 | INFO     | current chi2=0.7539406090674639 (change=75.56444355351054 %)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | sum of square deviations: 226005592.62222195
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | sum of deviations: -10829053977.555555
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | mean x: 1770402490.6444445
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | mean y: 2612610.888888889
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | intersect: 84831416671.65363
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | chi2: 0.7550547125253075
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | current chi2=0.7550547125253075 (change=-0.14777071886626456 %)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | left removable region: 20
[2026-02-06 14:15:35] 2026-02-06 19:14:24,369 | INFO     | sum of square deviations: 125609840.21621634
[2026-02-06 14:15:35] 2026-02-06 19:14:24,384 | INFO     | sum of deviations: -2788960492.6486497
[2026-02-06 14:15:35] 2026-02-06 19:14:24,384 | INFO     | mean x: 1770402612.6756756
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | mean y: 2632066.472972973
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | intersect: 39311518490.77847
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | chi2: 0.004027476534209465
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | current memory leak: -22.20 B/s (using 74 data points, chi2=0.00)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | could have reported an average CPU frequency of 3727 MHz (7 samples)
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | ..............................
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . Timing measurements:
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . get job = 0 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . initial setup = 13 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . payload setup = 8 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . stage-in = 0 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . payload execution = 6097 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . stage-out = 3 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | . log creation = 0 s
[2026-02-06 14:15:35] 2026-02-06 19:14:24,385 | INFO     | ..............................
[2026-02-06 14:15:35] 2026-02-06 19:14:25,038 | INFO     | 
[2026-02-06 14:15:35] 2026-02-06 19:14:25,038 | INFO     | job summary report
[2026-02-06 14:15:35] 2026-02-06 19:14:25,038 | INFO     | --------------------------------------------------
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | PanDA job id: 6996349152
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | task id: 48442098
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | errors: (none)
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | pilot state: finished 
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | transexitcode: 0
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | exeerrorcode: 0
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | exeerrordiag: 
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | exitcode: 0
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | exitmsg: OK
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | cpuconsumptiontime: 23491 s
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | nevents: 400
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | neventsw: 0
[2026-02-06 14:15:35] 2026-02-06 19:14:25,039 | INFO     | pid: 538600
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | pgrp: 538600
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | corecount: 10
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | event service: False
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | sizes: {0: 2260764, 1: 2283095, 11: 2283123, 6110: 2310032, 6111: 2310031, 6114: 2319085, 6116: 2319269, 6118: 2319463}
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | --------------------------------------------------
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | 
[2026-02-06 14:15:35] 2026-02-06 19:14:25,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,160 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 14:15:35] 2026-02-06 19:14:25,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 14:15:35] 2026-02-06 19:14:25,160 | INFO     | job 6996349152 has completed (purged errors)
[2026-02-06 14:15:35] 2026-02-06 19:14:25,160 | INFO     | overall cleanup function is called
[2026-02-06 14:15:35] 2026-02-06 19:14:25,368 | INFO     | PID=526709 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 14:15:35] 2026-02-06 19:14:25,369 | INFO     | .. there are 37 such processes running
[2026-02-06 14:15:35] 2026-02-06 19:14:26,201 | INFO     | --- collectZombieJob: --- 10, [538600]
[2026-02-06 14:15:35] 2026-02-06 19:14:26,201 | INFO     | zombie collector waiting for pid 538600
[2026-02-06 14:15:35] 2026-02-06 19:14:26,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 14:15:35] 2026-02-06 19:14:26,202 | INFO     | collected zombie processes
[2026-02-06 14:15:35] 2026-02-06 19:14:26,202 | INFO     | will attempt to kill all subprocesses of pid=538600
[2026-02-06 14:15:35] 2026-02-06 19:14:28,386 | INFO     | process IDs to be killed: [538600] (in reverse order)
[2026-02-06 14:15:35] 2026-02-06 19:14:28,895 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 14:15:35] 2026-02-06 19:14:28,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 14:15:35] 2026-02-06 19:14:29,005 | INFO     | did not find any defunct processes belonging to 538600
[2026-02-06 14:15:35] 2026-02-06 19:14:29,080 | INFO     | did not find any defunct processes belonging to 538600
[2026-02-06 14:15:35] 2026-02-06 19:14:29,080 | INFO     | ready for new job
[2026-02-06 14:15:35] 2026-02-06 19:14:29,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 14:15:35] 2026-02-06 19:14:29,082 | INFO     | **************************************
[2026-02-06 14:15:35] 2026-02-06 19:14:29,082 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 14:15:35] 2026-02-06 19:14:29,082 | INFO     | **************************************
[2026-02-06 14:15:35] 2026-02-06 19:14:29,082 | INFO     | 
[2026-02-06 14:15:35] 2026-02-06 19:14:29,086 | INFO     | architecture information:
[2026-02-06 14:15:35] 2026-02-06 19:14:29,087 | INFO     | executing command: cat /etc/os-release
[2026-02-06 14:15:35] 2026-02-06 19:14:29,220 | INFO     | cat /etc/os-release:
[2026-02-06 14:15:35] NAME="CentOS Linux"
[2026-02-06 14:15:35] VERSION="7 (Core)"
[2026-02-06 14:15:35] ID="centos"
[2026-02-06 14:15:35] ID_LIKE="rhel fedora"
[2026-02-06 14:15:35] VERSION_ID="7"
[2026-02-06 14:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 14:15:35] ANSI_COLOR="0;31"
[2026-02-06 14:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 14:15:35] HOME_URL="https://www.centos.org/"
[2026-02-06 14:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 14:15:35] 
[2026-02-06 14:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 14:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 14:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 14:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 14:15:35] 
[2026-02-06 14:15:35] 2026-02-06 19:14:29,221 | INFO     | **************************************
[2026-02-06 14:15:35] 2026-02-06 19:14:29,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | INFO     | sufficient remaining disk space (68839014400 B)
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | INFO     | update_server=False
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 14:15:35] 2026-02-06 19:14:29,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 14:15:35] 2026-02-06 19:14:29,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 14:15:35] 2026-02-06 19:14:29,769 | INFO     | aborting loop
[2026-02-06 14:15:35] 2026-02-06 19:14:30,194 | INFO     | all job control threads have been joined
[2026-02-06 14:15:35] 2026-02-06 19:14:30,257 | INFO     | all data control threads have been joined
[2026-02-06 14:15:35] 2026-02-06 19:14:30,756 | INFO     | all payload control threads have been joined
[2026-02-06 14:15:35] 2026-02-06 19:14:30,775 | INFO     | [job] job monitor thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:30,794 | INFO     | [job] retrieve thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:30,795 | INFO     | [job] queue monitor thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:30,908 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,004 | INFO     | [data] copytool_in thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,005 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,008 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,200 | INFO     | [job] control thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,219 | INFO     | [payload] failed_post thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,263 | INFO     | [data] control thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,587 | INFO     | [job] validate thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,762 | INFO     | [payload] control thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,783 | INFO     | [data] copytool_out thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:31,839 | INFO     | [payload] validate_post thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:33,778 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 14:15:35] 2026-02-06 19:14:59,015 | INFO     | PID=526709 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 14:15:35] 2026-02-06 19:14:59,025 | INFO     | .. there are 37 such processes running
[2026-02-06 14:15:35] 2026-02-06 19:14:59,025 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 14:15:35] 2026-02-06 19:14:59,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 14:15:35] 2026-02-06 19:14:59,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 14:15:35] 2026-02-06 19:15:26,033 | INFO     | [monitor] cgroup control has ended
[2026-02-06 14:15:35] 2026-02-06 19:15:27,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386597230400)>', '<ExcThread(monitor, started 140385955337984)>']
[2026-02-06 14:15:35] 2026-02-06 19:15:28,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 14:15:35] 2026-02-06 19:15:28,229 | INFO     | [monitor] control thread has ended
[2026-02-06 14:15:35] 2026-02-06 19:15:32,839 | INFO     | all workflow threads have been joined
[2026-02-06 14:15:35] 2026-02-06 19:15:32,839 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 14:15:35] 2026-02-06 19:15:32,840 | INFO     | traces error code: 0
[2026-02-06 14:15:35] 2026-02-06 19:15:32,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 14:15:35] 2026-02-06 19:15:33,400 [wrapper] ==== pilot stdout END ====
[2026-02-06 14:15:35] 2026-02-06 19:15:33,440 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 14:15:35] 2026-02-06 19:15:33,472 [wrapper] pilotpid: 526709
[2026-02-06 14:15:35] 2026-02-06 19:15:33,500 [wrapper] Pilot exit status: 0
[2026-02-06 14:15:35] 2026-02-06 19:15:33,747 [wrapper] pandaids: 6996349152
[2026-02-06 14:15:35] 2026-02-06 19:15:34,231 [wrapper] cleanup supervisor_pilot  967786 526711
[2026-02-06 14:15:35] 2026-02-06 19:15:34,249 [wrapper] Test setup, not cleaning
[2026-02-06 14:15:35] 2026-02-06 19:15:34,268 [wrapper] apfmon messages muted
[2026-02-06 14:15:35] 2026-02-06 19:15:34,285 [wrapper] ==== wrapper stdout END ====
[2026-02-06 14:15:35] 2026-02-06 19:15:34,299 [wrapper] ==== wrapper stderr END ====
[2026-02-06 14:15:35]  *** Error codes and diagnostics ***
[2026-02-06 14:15:35]     "exeErrorCode": 0,
[2026-02-06 14:15:35]     "exeErrorDiag": "",
[2026-02-06 14:15:35]     "pilotErrorCode": 0,
[2026-02-06 14:15:35]     "pilotErrorDiag": "",
[2026-02-06 14:15:35]  *** Listing of results directory ***
[2026-02-06 14:15:35] total 668684
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas    584627 Feb  5 23:58 pilot3.tar.gz
[2026-02-06 14:15:35] -rwx------. 1 boincer umatlas     36322 Feb  6 00:11 runpilot2-wrapper.sh
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 00:15 queuedata.json
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas       100 Feb  6 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 14:15:35] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 12:31 run_atlas
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas       105 Feb  6 12:31 job.xml
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas 496014625 Feb  6 12:31 EVNT.48442096._000053.pool.root.1
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 12:31 start_atlas.sh
[2026-02-06 14:15:35] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 12:31 shared
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas    597955 Feb  6 12:31 input.tar.gz
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas         0 Feb  6 12:31 boinc_lockfile
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas      2529 Feb  6 12:31 pandaJob.out
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas        57 Feb  6 12:31 setup.sh.local
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas   1009504 Feb  6 12:32 agis_schedconf.cvmfs.json
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas   1513088 Feb  6 12:32 agis_ddmendpoints.agis.ALL.json
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas       425 Feb  6 12:32 workernode_map.json
[2026-02-06 14:15:35] drwx------. 5 boincer umatlas      4096 Feb  6 12:32 pilot3
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas      7171 Feb  6 14:10 init_data.xml
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas 182309192 Feb  6 14:12 HITS.48442098._002635.pool.root.1
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas       530 Feb  6 14:13 boinc_task_state.xml
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas        95 Feb  6 14:14 pilot_heartbeat.json
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas      1045 Feb  6 14:14 memory_monitor_summary.json
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas    402207 Feb  6 14:14 log.48442098._002635.job.log.tgz.1
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas      6329 Feb  6 14:14 heartbeat.json
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas        27 Feb  6 14:15 wrapper_checkpoint.txt
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 14:15 boinc_mmap_file
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas      4819 Feb  6 14:15 pilotlog.txt
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas    825731 Feb  6 14:15 log.48442098._002635.job.log.1
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas       357 Feb  6 14:15 output.list
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas       620 Feb  6 14:15 runtime_log
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas   1249280 Feb  6 14:15 result.tar.gz
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas      9338 Feb  6 14:15 runtime_log.err
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas       651 Feb  6 14:15 AjhMDmHJT88n9Rq4apOajLDm4fhM0noT9bVooX4SDmUgXKDmtUMxAo.diag
[2026-02-06 14:15:35] -rw-r--r--. 1 boincer umatlas     21435 Feb  6 14:15 stderr.txt
[2026-02-06 14:15:35] HITS file was successfully produced:
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas 182309192 Feb  6 14:12 shared/HITS.pool.root.1
[2026-02-06 14:15:35]  *** Contents of shared directory: ***
[2026-02-06 14:15:35] total 664260
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas 496014625 Feb  6 12:31 ATLAS.root_0
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 12:31 start_atlas.sh
[2026-02-06 14:15:35] -rw-r--r--. 2 boincer umatlas    597955 Feb  6 12:31 input.tar.gz
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas 182309192 Feb  6 14:12 HITS.pool.root.1
[2026-02-06 14:15:35] -rw-------. 1 boincer umatlas   1249280 Feb  6 14:15 result.tar.gz
14:15:37 (520377): run_atlas exited; CPU time 23639.294043
14:15:37 (520377): called boinc_finish(0)

</stderr_txt>
]]>

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