Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:45 (1905014): wrapper (7.7.26015): starting
12:17:45 (1905014): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 12:17:45] Arguments: --nthreads 12
[2026-02-06 12:17:45] Threads: 12
[2026-02-06 12:17:45] Checking for CVMFS
[2026-02-06 12:17:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 12:17:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 12:17:45] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 12:17:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 12:17:45] 2.11.5.0 2104101 132514 232008 155958 1 426 33869067 45568001 23347 130560 0 1222176667 99.808 718980954 22703 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 12:17:45] CVMFS is ok
[2026-02-06 12:17:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 12:17:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 12:17:45] Further information can be found at the LHC@home message board.
[2026-02-06 12:17:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 12:17:45] Checking for apptainer binary...
[2026-02-06 12:17:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 12:17:45] Running /usr/bin/apptainer --version
[2026-02-06 12:17:45] apptainer version 1.4.1-1.el9
[2026-02-06 12:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 12:17:45] wns0090.triumf.lcg
[2026-02-06 12:17:45] apptainer works
[2026-02-06 12:17:46] Set ATHENA_PROC_NUMBER=12
[2026-02-06 12:17:46] Set ATHENA_CORE_NUMBER=12
[2026-02-06 12:17:46] Starting ATLAS job with PandaID=7004223878
[2026-02-06 12:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 12:22:37]  *** The last 200 lines of the pilot log: ***
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | wrong length of table data, x=[1770409159.0], y=[2140.0] (must be same and length>=4)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | INFO     | could have reported an average CPU frequency of 2707 MHz (4 samples)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . Timing measurements:
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . get job = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . initial setup = 22 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload setup = 19 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-in = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload execution = 47 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-out = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . log creation = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004223878/pilotlog.txt
[2026-02-06 12:22:37] 2026-02-06 20:21:53,725 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 12:22:37] - Log from pilotlog.txt -
[2026-02-06 12:22:37] 2026-02-06 20:21:53,675 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004223878/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,679 | INFO     | extracted standard info from prmon json
[2026-02-06 12:22:37] 2026-02-06 20:21:53,679 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | wrong length of table data, x=[1770409159.0], y=[2140.0] (must be same and length>=4)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | INFO     | could have reported an average CPU frequency of 2707 MHz (4 samples)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . Timing measurements:
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . get job = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . initial setup = 22 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload setup = 19 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-in = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload execution = 47 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-out = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . log creation = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004223878/pilotlog.txt
[2026-02-06 12:22:37] 2026-02-06 20:21:53,727 | WARNING  | 
[2026-02-06 12:22:37] [begin log extracts]
[2026-02-06 12:22:37] - Log from pilotlog.txt -
[2026-02-06 12:22:37] 2026-02-06 20:21:53,675 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004223878/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,679 | INFO     | extracted standard info from prmon json
[2026-02-06 12:22:37] 2026-02-06 20:21:53,679 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | WARNING  | wrong length of table data, x=[1770409159.0], y=[2140.0] (must be same and length>=4)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,680 | INFO     | could have reported an average CPU frequency of 2707 MHz (4 samples)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . Timing measurements:
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . get job = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . initial setup = 22 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload setup = 19 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-in = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . payload execution = 47 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . stage-out = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | . log creation = 0 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | ..............................
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 12:22:37] 2026-02-06 20:21:53,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004223878/pilotlog.txt
[2026-02-06 12:22:37] [end log extracts]
[2026-02-06 12:22:37] 2026-02-06 20:21:53,727 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,727 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | 
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | job summary report
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | --------------------------------------------------
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | PanDA job id: 7004223878
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | task id: 48317892
[2026-02-06 12:22:37] 2026-02-06 20:21:53,956 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 12:19:43,849 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | pilot state: failed 
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | transexitcode: 65
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | exeerrorcode: 65
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | exitcode: 65
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | nevents: 0
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | neventsw: 0
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | pid: 1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | pgrp: 1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | corecount: 12
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | event service: False
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | sizes: {0: 2283036, 11: 2283036, 71: 2306372, 72: 2306348, 73: 2310668, 77: 2310696, 192: 2311018}
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | --------------------------------------------------
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | 
[2026-02-06 12:22:37] 2026-02-06 20:21:53,957 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 12:22:37] 2026-02-06 20:21:54,052 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 12:22:37] 2026-02-06 20:21:54,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 12:22:37] 2026-02-06 20:21:54,054 | INFO     | job 7004223878 has completed (purged errors)
[2026-02-06 12:22:37] 2026-02-06 20:21:54,054 | INFO     | overall cleanup function is called
[2026-02-06 12:22:37] 2026-02-06 20:21:55,060 | INFO     | --- collectZombieJob: --- 10, [1913649]
[2026-02-06 12:22:37] 2026-02-06 20:21:55,060 | INFO     | zombie collector waiting for pid 1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:55,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 12:22:37] 2026-02-06 20:21:55,060 | INFO     | collected zombie processes
[2026-02-06 12:22:37] 2026-02-06 20:21:55,060 | INFO     | will attempt to kill all subprocesses of pid=1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:55,492 | INFO     | process IDs to be killed: [1913649] (in reverse order)
[2026-02-06 12:22:37] 2026-02-06 20:21:55,725 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 12:22:37] 2026-02-06 20:21:55,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 12:22:37] 2026-02-06 20:21:55,734 | INFO     | did not find any defunct processes belonging to 1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:55,744 | INFO     | did not find any defunct processes belonging to 1913649
[2026-02-06 12:22:37] 2026-02-06 20:21:55,744 | INFO     | ready for new job
[2026-02-06 12:22:37] 2026-02-06 20:21:55,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 12:22:37] 2026-02-06 20:21:55,745 | INFO     | **************************************
[2026-02-06 12:22:37] 2026-02-06 20:21:55,745 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 12:22:37] 2026-02-06 20:21:55,745 | INFO     | **************************************
[2026-02-06 12:22:37] 2026-02-06 20:21:55,745 | INFO     | 
[2026-02-06 12:22:37] 2026-02-06 20:21:55,747 | INFO     | architecture information:
[2026-02-06 12:22:37] 2026-02-06 20:21:55,748 | INFO     | executing command: cat /etc/os-release
[2026-02-06 12:22:37] 2026-02-06 20:21:55,839 | INFO     | cat /etc/os-release:
[2026-02-06 12:22:37] NAME="CentOS Linux"
[2026-02-06 12:22:37] VERSION="7 (Core)"
[2026-02-06 12:22:37] ID="centos"
[2026-02-06 12:22:37] ID_LIKE="rhel fedora"
[2026-02-06 12:22:37] VERSION_ID="7"
[2026-02-06 12:22:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 12:22:37] ANSI_COLOR="0;31"
[2026-02-06 12:22:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 12:22:37] HOME_URL="https://www.centos.org/"
[2026-02-06 12:22:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 12:22:37] 
[2026-02-06 12:22:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 12:22:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 12:22:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 12:22:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 12:22:37] 
[2026-02-06 12:22:37] 2026-02-06 20:21:55,840 | INFO     | **************************************
[2026-02-06 12:22:37] 2026-02-06 20:21:56,344 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 12:22:37] 2026-02-06 20:21:56,359 | INFO     | sufficient remaining disk space (2123477549056 B)
[2026-02-06 12:22:37] 2026-02-06 20:21:56,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 12:22:37] 2026-02-06 20:21:56,360 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 12:22:37] 2026-02-06 20:21:56,360 | INFO     | update_server=False
[2026-02-06 12:22:37] 2026-02-06 20:21:56,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 12:22:37] 2026-02-06 20:21:56,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 12:22:37] 2026-02-06 20:21:56,415 | INFO     | all job control threads have been joined
[2026-02-06 12:22:37] 2026-02-06 20:21:56,581 | INFO     | all data control threads have been joined
[2026-02-06 12:22:37] 2026-02-06 20:21:56,688 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 12:22:37] 2026-02-06 20:21:56,688 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 12:22:37] 2026-02-06 20:21:56,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:22:37] 2026-02-06 20:21:56,688 | INFO     | will abort loop
[2026-02-06 12:22:37] 2026-02-06 20:21:57,376 | INFO     | [job] retrieve thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:57,421 | INFO     | [job] control thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:57,489 | INFO     | [data] copytool_in thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:57,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 12:22:37] 2026-02-06 20:21:57,587 | INFO     | [data] control thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:57,663 | INFO     | all payload control threads have been joined
[2026-02-06 12:22:37] 2026-02-06 20:21:57,694 | INFO     | [job] job monitor thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:57,797 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,258 | INFO     | [job] validate thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,367 | INFO     | [data] copytool_out thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,616 | INFO     | [payload] validate_post thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,660 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,660 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,669 | INFO     | [payload] control thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,720 | INFO     | [payload] failed_post thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:21:58,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:22:37] 2026-02-06 20:21:59,987 | INFO     | [job] queue monitor thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:22:01,554 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 12:22:37] 2026-02-06 20:22:25,703 | INFO     | PID=1908895 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 12:22:37] 2026-02-06 20:22:25,703 | INFO     | .. there are 42 such processes running
[2026-02-06 12:22:37] 2026-02-06 20:22:25,704 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 12:22:37] 2026-02-06 20:22:25,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 12:22:37] 2026-02-06 20:22:25,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 12:22:37] 2026-02-06 20:22:29,941 | INFO     | [monitor] cgroup control has ended
[2026-02-06 12:22:37] 2026-02-06 20:22:31,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276070577984)>', '<ExcThread(monitor, started 140275678689024)>']
[2026-02-06 12:22:37] 2026-02-06 20:22:32,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 12:22:37] 2026-02-06 20:22:32,749 | INFO     | [monitor] control thread has ended
[2026-02-06 12:22:37] 2026-02-06 20:22:36,982 | INFO     | all workflow threads have been joined
[2026-02-06 12:22:37] 2026-02-06 20:22:36,982 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 12:22:37] 2026-02-06 20:22:36,983 | INFO     | traces error code: 0
[2026-02-06 12:22:37] 2026-02-06 20:22:36,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 12:22:37] 2026-02-06 20:22:37,322 [wrapper] ==== pilot stdout END ====
[2026-02-06 12:22:37] 2026-02-06 20:22:37,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 12:22:37] 2026-02-06 20:22:37,363 [wrapper] pilotpid: 1908895
[2026-02-06 12:22:37] 2026-02-06 20:22:37,374 [wrapper] Pilot exit status: 0
[2026-02-06 12:22:37] 2026-02-06 20:22:37,451 [wrapper] pandaids: 7004223878
[2026-02-06 12:22:37] 2026-02-06 20:22:37,784 [wrapper] cleanup supervisor_pilot 1908906 1908896
[2026-02-06 12:22:37] 2026-02-06 20:22:37,804 [wrapper] Test setup, not cleaning
[2026-02-06 12:22:37] 2026-02-06 20:22:37,807 [wrapper] apfmon messages muted
[2026-02-06 12:22:37] 2026-02-06 20:22:37,808 [wrapper] ==== wrapper stdout END ====
[2026-02-06 12:22:37] 2026-02-06 20:22:37,810 [wrapper] ==== wrapper stderr END ====
[2026-02-06 12:22:37]  *** Error codes and diagnostics ***
[2026-02-06 12:22:37]     "exeErrorCode": 65,
[2026-02-06 12:22:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 12:22:37]     "pilotErrorCode": 1305,
[2026-02-06 12:22:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 12:22:37]  *** Listing of results directory ***
[2026-02-06 12:22:37] total 485192
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc      5111 Feb  6 08:59 queuedata.json
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc    584627 Feb  6 08:59 pilot3.tar.gz
[2026-02-06 12:22:37] -rwx------. 1 boinc boinc     36322 Feb  6 08:59 runpilot2-wrapper.sh
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc       100 Feb  6 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 12:22:37] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 12:17 run_atlas
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc       105 Feb  6 12:17 job.xml
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc      6594 Feb  6 12:17 init_data.xml
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc 492687809 Feb  6 12:17 EVNT.48317889._000280.pool.root.1
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc     15845 Feb  6 12:17 start_atlas.sh
[2026-02-06 12:22:37] drwxrwx--x. 2 boinc boinc      4096 Feb  6 12:17 shared
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc    597937 Feb  6 12:17 input.tar.gz
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc         0 Feb  6 12:17 boinc_lockfile
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc      2522 Feb  6 12:17 pandaJob.out
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc   1009512 Feb  6 12:18 agis_schedconf.cvmfs.json
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc   1513088 Feb  6 12:18 agis_ddmendpoints.agis.ALL.json
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc       445 Feb  6 12:18 workernode_map.json
[2026-02-06 12:22:37] drwx------. 5 boinc boinc      4096 Feb  6 12:18 pilot3
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc       980 Feb  6 12:19 memory_monitor_summary.json
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc     21612 Feb  6 12:19 log.48317892._014839.job.log.tgz.1
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc      7052 Feb  6 12:21 heartbeat.json
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc        95 Feb  6 12:22 pilot_heartbeat.json
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc       523 Feb  6 12:22 boinc_task_state.xml
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc      8192 Feb  6 12:22 boinc_mmap_file
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc        22 Feb  6 12:22 wrapper_checkpoint.txt
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc      5005 Feb  6 12:22 pilotlog.txt
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc     85385 Feb  6 12:22 log.48317892._014839.job.log.1
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc       188 Feb  6 12:22 output.list
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc       620 Feb  6 12:22 runtime_log
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc    122880 Feb  6 12:22 result.tar.gz
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc      8635 Feb  6 12:22 runtime_log.err
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc       646 Feb  6 12:22 5ZsMDmwLe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPJZKDm6k4Vmm.diag
[2026-02-06 12:22:37] -rw-r--r--. 1 boinc boinc     21812 Feb  6 12:22 stderr.txt
[2026-02-06 12:22:37] No HITS result produced
[2026-02-06 12:22:37]  *** Contents of shared directory: ***
[2026-02-06 12:22:37] total 481868
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc 492687809 Feb  6 12:17 ATLAS.root_0
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc     15845 Feb  6 12:17 start_atlas.sh
[2026-02-06 12:22:37] -rw-r--r--. 2 boinc boinc    597937 Feb  6 12:17 input.tar.gz
[2026-02-06 12:22:37] -rw-------. 1 boinc boinc    122880 Feb  6 12:22 result.tar.gz
12:22:39 (1905014): run_atlas exited; CPU time 21.092054
12:22:39 (1905014): called boinc_finish(0)

</stderr_txt>
]]>

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