Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-06 16:13:55 (13152): vboxwrapper version 26210
2026-02-06 16:13:55 (13152): BOINC client version: 8.2.8
2026-02-06 16:13:56 (13152): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-06 16:13:56 (13152): Successfully copied 'init_data.xml' to the shared directory.
2026-02-06 16:13:57 (13152): Create VM. (boinc_5ded8f623c233832, slot#4)
2026-02-06 16:13:57 (13152): Setting Memory Size for VM. (4800MB)
2026-02-06 16:13:57 (13152): Setting CPU Count for VM. (8)
2026-02-06 16:13:58 (13152): Setting Chipset Options for VM.
2026-02-06 16:13:58 (13152): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-06 16:13:58 (13152): Setting Boot Options for VM.
2026-02-06 16:13:59 (13152): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-06 16:13:59 (13152): Enabling VM Network Access.
2026-02-06 16:13:59 (13152): Disabling USB Support for VM.
2026-02-06 16:14:00 (13152): Disabling COM Port Support for VM.
2026-02-06 16:14:00 (13152): Disabling LPT Port Support for VM.
2026-02-06 16:14:00 (13152): Disabling Audio Support for VM.
2026-02-06 16:14:01 (13152): Disabling Clipboard Support for VM.
2026-02-06 16:14:01 (13152): Disabling Drag and Drop Support for VM.
2026-02-06 16:14:01 (13152): Adding storage controller(s) to VM.
2026-02-06 16:14:01 (13152): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-06 16:14:04 (13152): Adding VirtualBox Guest Additions to VM.
2026-02-06 16:14:04 (13152): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-06 16:14:04 (13152): forwarding host port 53887 to guest port 80
2026-02-06 16:14:05 (13152): Enabling remote desktop for VM.
2026-02-06 16:14:05 (13152): Required extension pack not installed, remote desktop not enabled.
2026-02-06 16:14:05 (13152): Enabling shared directory for VM.
2026-02-06 16:14:05 (13152): Starting VM using VBoxManage interface. (boinc_5ded8f623c233832, slot#4)
2026-02-06 16:14:12 (13152): Successfully started VM. (PID = '30776')
2026-02-06 16:14:12 (13152): Reporting VM Process ID to BOINC.
2026-02-06 16:14:12 (13152): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-06 16:14:12 (13152): Guest Log: CPUID EDX: 0x178bfbff
2026-02-06 16:14:12 (13152): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-06 16:14:12 (13152): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-06 16:14:12 (13152): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-06 16:14:12 (13152): Detected: Web Application Enabled (http://localhost:53887)
2026-02-06 16:14:12 (13152): Preference change detected
2026-02-06 16:14:12 (13152): Setting CPU throttle for VM. (80%)
2026-02-06 16:14:12 (13152): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-06 16:14:14 (13152): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-06 16:14:14 (13152): Guest Log: BIOS: Booting from Hard Disk...
2026-02-06 16:14:17 (13152): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-06 16:14:17 (13152): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-06 16:14:17 (13152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-06 16:14:21 (13152): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-06 16:14:21 (13152): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-06 16:14:26 (13152): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000239 main     Log opened 2026-02-06T16:14:25.085680000Z
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000390 main     OS Product: Linux
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000413 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000429 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000445 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000446 main     Process ID: 1371
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.000446 main     Package type: LINUX_64BITS_GENERIC
2026-02-06 16:14:26 (13152): Guest Log: 00:00:00.001184 main     5.2.32 r132073 started. Verbose level = 0
2026-02-06 16:14:26 (13152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-06 16:14:26 (13152): Guest Log: [INFO] Mounting shared directory
2026-02-06 16:14:26 (13152): Guest Log: [INFO] Checking for init_data.xml
2026-02-06 16:14:32 (13152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-06 16:14:32 (13152): Guest Log: [INFO] Detected branch: prod
2026-02-06 16:14:32 (13152): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-06 16:14:32 (13152): Guest Log: Copying input files
2026-02-06 16:14:35 (13152): Guest Log: Copied input files into RunAtlas.
2026-02-06 16:14:35 (13152): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-06 16:14:35 (13152): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-06 16:14:35 (13152): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-06 16:14:35 (13152): Guest Log: Further information can be found at the LHC@home message board.
2026-02-06 16:14:36 (13152): Guest Log: 00:00:10.012762 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 848 502 000ns (GuestNow=1 770 412 475 938 298 000 ns GuestLast=1 770 394 465 089 796 000 ns fSetTimeLastLoop=true )
2026-02-06 16:15:33 (13152): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-06 16:15:34 (13152): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-06 16:15:34 (13152): Guest Log: 2.6.3.0 1653 1 32196 155960 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-06 16:15:34 (13152): Guest Log: copied the webapp to /var/www
2026-02-06 16:15:34 (13152): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-06 16:15:34 (13152): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-06 16:15:34 (13152): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-06 16:15:35 (13152): Guest Log:  *** Starting ATLAS job. (PandaID=6997901607 taskID=48310749) ***
2026-02-06 17:00:02 (13152): VM state change detected. (old = 'running', new = 'paused')
2026-02-06 20:00:02 (13152): VM state change detected. (old = 'paused', new = 'running')
2026-02-06 20:00:07 (13152): Guest Log: 00:45:40.701136 timesync vgsvcTimeSyncWorker: Radical host time change: 10 809 990 000 000ns (HostNow=1 770 426 006 626 000 000 ns HostLast=1 770 415 196 636 000 000 ns)
2026-02-06 20:00:17 (13152): Guest Log: 00:45:50.701822 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 810 017 665 000ns (GuestNow=1 770 426 016 635 304 000 ns GuestLast=1 770 415 206 617 639 000 ns fSetTimeLastLoop=true )
2026-02-06 20:12:09 (13152): Guest Log:  *** Job finished ***
2026-02-06 20:12:09 (13152): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:11:56,730 | INFO     | end of generic workflow (traces error code: 0)
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:11:56,730 | INFO     | traces error code: 0
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:11:56,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,678 | INFO     | PID=6109 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | INFO     | found 0 job(s) in 20 queues
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | CRITICAL | thread 'MainThread' is not alive
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,679 | INFO     | [monitor] control thread has ended
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,826 [wrapper] ==== pilot stdout END ====
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,832 [wrapper] ==== wrapper stdout RESUME ====
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,837 [wrapper] pilotpid: 6109
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,842 [wrapper] Pilot exit status: 0
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,928 [wrapper] pandaids: 6997901607
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,960 [wrapper] cleanup supervisor_pilot 15789 6110
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,967 [wrapper] Test setup, not cleaning
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,976 [wrapper] apfmon messages muted
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,981 [wrapper] ==== wrapper stdout END ====
2026-02-06 20:12:09 (13152): Guest Log: 2026-02-07 01:12:08,986 [wrapper] ==== wrapper stderr END ====
2026-02-06 20:12:09 (13152): Guest Log:  *** Error codes and diagnostics ***
2026-02-06 20:12:09 (13152): Guest Log:     "exeErrorCode": 0,
2026-02-06 20:12:09 (13152): Guest Log:     "exeErrorDiag": "",
2026-02-06 20:12:09 (13152): Guest Log:     "pilotErrorCode": 0,
2026-02-06 20:12:09 (13152): Guest Log:     "pilotErrorDiag": "",
2026-02-06 20:12:09 (13152): Guest Log:  *** Listing of results directory ***
2026-02-06 20:12:09 (13152): Guest Log: total 187796
2026-02-06 20:12:09 (13152): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 12:12 pilot3.tar.gz
2026-02-06 20:12:09 (13152): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 12:13 queuedata.json
2026-02-06 20:12:09 (13152): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 12:14 runpilot2-wrapper.sh
2026-02-06 20:12:09 (13152): Guest Log: -rwxr-xr-x. 1 atlas atlas      9746 Feb  6 21:14 init_data.xml
2026-02-06 20:12:09 (13152): Guest Log: -rwxr-xr-x. 1 atlas atlas    597944 Feb  6 21:14 input.tar.gz
2026-02-06 20:12:09 (13152): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  6 21:14 start_atlas.sh
2026-02-06 20:12:09 (13152): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  6 21:14 EVNT.48310747._000112.pool.root.1 -> /data/./ATLAS.root_0
2026-02-06 20:12:09 (13152): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Feb  6 21:15 pandaJob.out
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas   1009520 Feb  6 21:16 agis_schedconf.cvmfs.json
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas       423 Feb  6 21:16 workernode_map.json
2026-02-06 20:12:09 (13152): Guest Log: drwx------. 5 atlas atlas      4096 Feb  6 21:16 pilot3
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas 186771107 Feb  7 01:11 HITS.48310749._005783.pool.root.1
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas        98 Feb  7 01:11 pilot_heartbeat.json
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas      1026 Feb  7 01:11 memory_monitor_summary.json
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  7 01:11 agis_ddmendpoints.agis.ALL.json
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas    332506 Feb  7 01:11 log.48310749._005783.job.log.tgz.1
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas      6353 Feb  7 01:11 heartbeat.json
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas       814 Feb  7 01:12 pilotlog.txt
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas    496781 Feb  7 01:12 log.48310749._005783.job.log.1
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas       357 Feb  7 01:12 output.list
2026-02-06 20:12:09 (13152): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  7 01:12 runtime_log
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas    849920 Feb  7 01:12 result.tar.gz
2026-02-06 20:12:09 (13152): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Feb  7 01:12 runtime_log.err
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas       653 Feb  7 01:12 KqhKDm2tZ88n9Rq4apOajLDm4fhM0noT9bVooX4SDmMTYKDmumSTLm.diag
2026-02-06 20:12:09 (13152): Guest Log: Looking for outputfile HITS.48310749._005783.pool.root.1
2026-02-06 20:12:09 (13152): Guest Log: HITS file was successfully produced
2026-02-06 20:12:09 (13152): Guest Log: -rw-------. 1 atlas atlas 186771107 Feb  7 01:11 /home/atlas/RunAtlas/HITS.48310749._005783.pool.root.1
2026-02-06 20:12:10 (13152): Guest Log: Successfully finished the ATLAS job!
2026-02-06 20:12:10 (13152): Guest Log: Copying the results back to the shared directory!
2026-02-06 20:12:10 (13152): Guest Log:  *** Contents of shared directory: ***
2026-02-06 20:12:10 (13152): Guest Log: total 671528
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root 499390564 Feb  6 21:13 ATLAS.root_0
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root 186771107 Feb  7 01:12 HITS.pool.root.1
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root      9746 Feb  6 21:13 init_data.xml
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root    597944 Feb  6 16:43 input.tar.gz
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root    849920 Feb  7 01:12 result.tar.gz
2026-02-06 20:12:10 (13152): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 16:43 start_atlas.sh
2026-02-06 20:12:10 (13152): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-06 20:12:10 (13152): VM Completion File Detected.
2026-02-06 20:12:10 (13152): Powering off VM.
2026-02-06 20:12:11 (13152): Successfully stopped VM.
2026-02-06 20:12:11 (13152): Deregistering VM. (boinc_5ded8f623c233832, slot#4)
2026-02-06 20:12:11 (13152): Removing network bandwidth throttle group from VM.
2026-02-06 20:12:11 (13152): Removing VM from VirtualBox.
2026-02-06 20:12:17 (13152): called boinc_finish(0)

</stderr_txt>
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