Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:33 (1809212): wrapper (7.7.26015): starting
06:04:33 (1809212): wrapper: running run_atlas (--nthreads 3)
[2026-02-07 06:04:33] Arguments: --nthreads 3
[2026-02-07 06:04:33] Threads: 3
[2026-02-07 06:04:33] Checking for CVMFS
[2026-02-07 06:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:04:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:04:34] 2.9.2.0 1600344 1420 79328 155971 3 50 19974103 36864000 0 130560 0 601880 99.983 54564 6743 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 06:04:34] CVMFS is ok
[2026-02-07 06:04:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:04:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:04:34] Further information can be found at the LHC@home message board.
[2026-02-07 06:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:04:34] Checking for apptainer binary...
[2026-02-07 06:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:04:34] Running /usr/bin/apptainer --version
[2026-02-07 06:04:34] apptainer version 1.4.1-1.1
[2026-02-07 06:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:04:34] thA371
[2026-02-07 06:04:34] apptainer works
[2026-02-07 06:04:34] Set ATHENA_PROC_NUMBER=3
[2026-02-07 06:04:34] Set ATHENA_CORE_NUMBER=3
[2026-02-07 06:04:34] Starting ATLAS job with PandaID=6996532992
[2026-02-07 06:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 07:26:55]  *** The last 200 lines of the pilot log: ***
[2026-02-07 07:26:55] 2026-02-07 06:26:06,511 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-07 07:26:55] 2026-02-07 06:26:06,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:26:55] 2026-02-07 06:26:06,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 07:26:55] 2026-02-07 06:26:06,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:26:55] 2026-02-07 06:26:06,512 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 07:26:55] 2026-02-07 06:26:06,512 | INFO     | aborting loop
[2026-02-07 07:26:55] 2026-02-07 06:26:06,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 07:26:55] 2026-02-07 06:26:06,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 07:26:55] 2026-02-07 06:26:06,840 | INFO     | all payload control threads have been joined
[2026-02-07 07:26:55] 2026-02-07 06:26:07,087 | INFO     | all job control threads have been joined
[2026-02-07 07:26:55] 2026-02-07 06:26:07,517 | INFO     | [job] retrieve thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:07,517 | INFO     | [job] queue monitor thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:07,517 | INFO     | [job] job monitor thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:07,560 | INFO     | all data control threads have been joined
[2026-02-07 07:26:55] 2026-02-07 06:26:07,613 | INFO     | [data] copytool_in thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:07,846 | INFO     | [payload] control thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:07,934 | INFO     | [payload] failed_post thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,093 | INFO     | [job] control thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,211 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,518 | INFO     | [data] copytool_out thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,566 | INFO     | [data] control thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,740 | INFO     | [payload] validate_post thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,859 | INFO     | [job] validate thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,949 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:08,955 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:09,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 07:26:55] 2026-02-07 06:26:13,065 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:17,514 | INFO     | job.realtimelogging is not enabled
[2026-02-07 07:26:55] 2026-02-07 06:26:18,520 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 07:26:55] 2026-02-07 06:26:49,728 | INFO     | [monitor] cgroup control has ended
[2026-02-07 07:26:55] 2026-02-07 06:26:50,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196809262912)>', '<ExcThread(monitor, started 140196188256000)>']
[2026-02-07 07:26:55] 2026-02-07 06:26:50,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 07:26:55] 2026-02-07 06:26:50,745 | INFO     | [monitor] control thread has ended
[2026-02-07 07:26:55] 2026-02-07 06:26:55,019 | INFO     | all workflow threads have been joined
[2026-02-07 07:26:55] 2026-02-07 06:26:55,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 07:26:55] 2026-02-07 06:26:55,020 | INFO     | traces error code: 0
[2026-02-07 07:26:55] 2026-02-07 06:26:55,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 07:26:55] 2026-02-07 06:26:55,072 [wrapper] ==== pilot stdout END ====
[2026-02-07 07:26:55] 2026-02-07 06:26:55,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 07:26:55] 2026-02-07 06:26:55,077 [wrapper] pilotpid: 1813255
[2026-02-07 07:26:55] 2026-02-07 06:26:55,079 [wrapper] Pilot exit status: 0
[2026-02-07 07:26:55] 2026-02-07 06:26:55,086 [wrapper] pandaids: 6996532992
[2026-02-07 07:26:55] 2026-02-07 06:26:55,102 [wrapper] cleanup supervisor_pilot 1822701 1813256
[2026-02-07 07:26:55] 2026-02-07 06:26:55,104 [wrapper] Test setup, not cleaning
[2026-02-07 07:26:55] 2026-02-07 06:26:55,107 [wrapper] apfmon messages muted
[2026-02-07 07:26:55] 2026-02-07 06:26:55,109 [wrapper] ==== wrapper stdout END ====
[2026-02-07 07:26:55] 2026-02-07 06:26:55,111 [wrapper] ==== wrapper stderr END ====
[2026-02-07 07:26:55]  *** Error codes and diagnostics ***
[2026-02-07 07:26:55]     "exeErrorCode": 0,
[2026-02-07 07:26:55]     "exeErrorDiag": "",
[2026-02-07 07:26:55]     "pilotErrorCode": 0,
[2026-02-07 07:26:55]     "pilotErrorDiag": "",
[2026-02-07 07:26:55]  *** Listing of results directory ***
[2026-02-07 07:26:55] total 671324
[2026-02-07 07:26:55] -rwx------ 1 boinc boinc     36322 Feb  6 10:17 runpilot2-wrapper.sh
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      5111 Feb  6 10:21 queuedata.json
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc    584627 Feb  6 10:21 pilot3.tar.gz
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc       100 Feb  7 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 07:26:55] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 06:04 run_atlas
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc       105 Feb  7 06:04 job.xml
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc 496136375 Feb  7 06:04 EVNT.48442096._000074.pool.root.1
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc    597961 Feb  7 06:04 input.tar.gz
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc     15845 Feb  7 06:04 start_atlas.sh
[2026-02-07 07:26:55] drwxrwx--x 2 boinc boinc      4096 Feb  7 06:04 shared
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc         0 Feb  7 06:04 boinc_setup_complete
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      6439 Feb  7 06:04 init_data.xml
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc         0 Feb  7 06:04 boinc_lockfile
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      2530 Feb  7 06:04 pandaJob.out
[2026-02-07 07:26:55] -rw------- 1 boinc boinc   1009504 Feb  7 06:04 agis_schedconf.cvmfs.json
[2026-02-07 07:26:55] -rw------- 1 boinc boinc   1513088 Feb  7 06:04 agis_ddmendpoints.agis.ALL.json
[2026-02-07 07:26:55] -rw------- 1 boinc boinc       427 Feb  7 06:04 workernode_map.json
[2026-02-07 07:26:55] drwx------ 5 boinc boinc      4096 Feb  7 06:04 pilot3
[2026-02-07 07:26:55] -rw------- 1 boinc boinc 185361164 Feb  7 07:25 HITS.48442098._003698.pool.root.1
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc       530 Feb  7 07:25 boinc_task_state.xml
[2026-02-07 07:26:55] -rw------- 1 boinc boinc      1020 Feb  7 07:25 memory_monitor_summary.json
[2026-02-07 07:26:55] -rw------- 1 boinc boinc    289485 Feb  7 07:26 log.48442098._003698.job.log.tgz.1
[2026-02-07 07:26:55] -rw------- 1 boinc boinc      6322 Feb  7 07:26 heartbeat.json
[2026-02-07 07:26:55] -rw------- 1 boinc boinc        95 Feb  7 07:26 pilot_heartbeat.json
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      8192 Feb  7 07:26 boinc_mmap_file
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc        27 Feb  7 07:26 wrapper_checkpoint.txt
[2026-02-07 07:26:55] -rw------- 1 boinc boinc      4624 Feb  7 07:26 pilotlog.txt
[2026-02-07 07:26:55] -rw------- 1 boinc boinc    716168 Feb  7 07:26 log.48442098._003698.job.log.1
[2026-02-07 07:26:55] -rw------- 1 boinc boinc       357 Feb  7 07:26 output.list
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc       620 Feb  7 07:26 runtime_log
[2026-02-07 07:26:55] -rw------- 1 boinc boinc   1024000 Feb  7 07:26 result.tar.gz
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      8896 Feb  7 07:26 runtime_log.err
[2026-02-07 07:26:55] -rw------- 1 boinc boinc       657 Feb  7 07:26 RbrNDmk8W88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmelYKDmBmMcam.diag
[2026-02-07 07:26:55] -rw-r--r-- 1 boinc boinc      7209 Feb  7 07:26 stderr.txt
[2026-02-07 07:26:55] HITS file was successfully produced:
[2026-02-07 07:26:55] -rw------- 1 boinc boinc 185361164 Feb  7 07:25 shared/HITS.pool.root.1
[2026-02-07 07:26:55]  *** Contents of shared directory: ***
[2026-02-07 07:26:55] total 667140
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc 496136375 Feb  7 06:04 ATLAS.root_0
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc    597961 Feb  7 06:04 input.tar.gz
[2026-02-07 07:26:55] -rw-r--r-- 2 boinc boinc     15845 Feb  7 06:04 start_atlas.sh
[2026-02-07 07:26:55] -rw------- 1 boinc boinc 185361164 Feb  7 07:25 HITS.pool.root.1
[2026-02-07 07:26:55] -rw------- 1 boinc boinc   1024000 Feb  7 07:26 result.tar.gz
07:26:56 (1809212): run_atlas exited; CPU time 14010.836805
07:26:56 (1809212): called boinc_finish(0)

</stderr_txt>
]]>

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