Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-06 10:09:16 (23448): vboxwrapper version 26210
2026-02-06 10:09:16 (23448): BOINC client version: 8.2.8
2026-02-06 10:09:17 (23448): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-06 10:09:17 (23448): Successfully copied 'init_data.xml' to the shared directory.
2026-02-06 10:09:17 (23448): Create VM. (boinc_45fab5433f2266de, slot#1)
2026-02-06 10:09:18 (23448): Setting Memory Size for VM. (4800MB)
2026-02-06 10:09:19 (23448): Setting CPU Count for VM. (8)
2026-02-06 10:09:20 (23448): Setting Chipset Options for VM.
2026-02-06 10:09:21 (23448): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-06 10:09:22 (23448): Setting Boot Options for VM.
2026-02-06 10:09:23 (23448): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-06 10:09:24 (23448): Enabling VM Network Access.
2026-02-06 10:09:25 (23448): Disabling USB Support for VM.
2026-02-06 10:09:26 (23448): Disabling COM Port Support for VM.
2026-02-06 10:09:26 (23448): Disabling LPT Port Support for VM.
2026-02-06 10:09:27 (23448): Disabling Audio Support for VM.
2026-02-06 10:09:28 (23448): Disabling Clipboard Support for VM.
2026-02-06 10:09:28 (23448): Disabling Drag and Drop Support for VM.
2026-02-06 10:09:29 (23448): Adding storage controller(s) to VM.
2026-02-06 10:09:29 (23448): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-06 10:09:31 (23448): Adding VirtualBox Guest Additions to VM.
2026-02-06 10:09:32 (23448): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-06 10:09:33 (23448): forwarding host port 59427 to guest port 80
2026-02-06 10:09:33 (23448): Enabling remote desktop for VM.
2026-02-06 10:09:34 (23448): Enabling shared directory for VM.
2026-02-06 10:09:35 (23448): Starting VM using VBoxManage interface. (boinc_45fab5433f2266de, slot#1)
2026-02-06 10:09:39 (23448): Successfully started VM. (PID = '21104')
2026-02-06 10:09:39 (23448): Reporting VM Process ID to BOINC.
2026-02-06 10:09:39 (23448): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-06 10:09:39 (23448): Guest Log: CPUID EDX: 0x178bfbff
2026-02-06 10:09:39 (23448): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-06 10:09:39 (23448): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-06 10:09:39 (23448): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-06 10:09:39 (23448): Detected: Web Application Enabled (http://localhost:59427)
2026-02-06 10:09:39 (23448): Detected: Remote Desktop Enabled (localhost:59428)
2026-02-06 10:09:39 (23448): Preference change detected
2026-02-06 10:09:39 (23448): Setting CPU throttle for VM. (100%)
2026-02-06 10:09:39 (23448): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-06 10:09:41 (23448): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-06 10:09:41 (23448): Guest Log: BIOS: Booting from Hard Disk...
2026-02-06 10:09:44 (23448): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-06 10:09:44 (23448): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-06 10:09:44 (23448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-06 10:09:55 (23448): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-06 10:09:55 (23448): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-06 10:10:28 (23448): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000080 main     Log opened 2026-02-06T10:10:27.106480000Z
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000148 main     OS Product: Linux
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000164 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000177 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000188 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000189 main     Process ID: 1370
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000189 main     Package type: LINUX_64BITS_GENERIC
2026-02-06 10:10:28 (23448): Guest Log: 00:00:00.000623 main     5.2.32 r132073 started. Verbose level = 0
2026-02-06 10:10:34 (23448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-06 10:10:34 (23448): Guest Log: [INFO] Mounting shared directory
2026-02-06 10:10:34 (23448): Guest Log: [INFO] Checking for init_data.xml
2026-02-06 10:10:38 (23448): Guest Log: 00:00:10.003510 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 598 884 942 000ns (GuestNow=1 770 394 225 992 764 000 ns GuestLast=1 770 372 627 107 822 000 ns fSetTimeLastLoop=true )
2026-02-06 10:11:47 (23448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-06 10:11:47 (23448): Guest Log: [INFO] Detected branch: prod
2026-02-06 10:11:47 (23448): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-06 10:11:47 (23448): Guest Log: Copying input files
2026-02-06 10:12:03 (23448): Guest Log: Copied input files into RunAtlas.
2026-02-06 10:12:03 (23448): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.100:3128 - will set in /etc/cvmfs/default.local
2026-02-06 10:12:19 (23448): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-06 10:12:19 (23448): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-06 10:12:19 (23448): Guest Log: 2.6.3.0 1694 0 29576 155951 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.0.100:3128 1
2026-02-06 10:12:23 (23448): Guest Log: copied the webapp to /var/www
2026-02-06 10:12:23 (23448): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-06 10:12:23 (23448): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-06 10:12:23 (23448): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-06 10:12:23 (23448): Guest Log:  *** Starting ATLAS job. (PandaID=6996410050 taskID=48442031) ***
2026-02-06 11:26:04 (23448): Guest Log:  *** Job finished ***
2026-02-06 11:26:04 (23448): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:13,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:13,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:43,350 | INFO     | [monitor] cgroup control has ended
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:43,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701515106112)>', '<ExcThread(monitor, started 139700622833408)>']
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:44,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:44,251 | INFO     | [monitor] control thread has ended
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,476 | INFO     | all workflow threads have been joined
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,476 | INFO     | end of generic workflow (traces error code: 0)
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,477 | INFO     | traces error code: 0
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,636 [wrapper] ==== pilot stdout END ====
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,639 [wrapper] ==== wrapper stdout RESUME ====
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,642 [wrapper] pilotpid: 6135
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,645 [wrapper] Pilot exit status: 0
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,689 [wrapper] pandaids: 6996410050
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,708 [wrapper] cleanup supervisor_pilot 23294 6136
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,710 [wrapper] Test setup, not cleaning
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,716 [wrapper] apfmon messages muted
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,719 [wrapper] ==== wrapper stdout END ====
2026-02-06 11:26:04 (23448): Guest Log: 2026-02-06 17:25:48,721 [wrapper] ==== wrapper stderr END ====
2026-02-06 11:26:04 (23448): Guest Log:  *** Error codes and diagnostics ***
2026-02-06 11:26:04 (23448): Guest Log:     "exeErrorCode": 0,
2026-02-06 11:26:04 (23448): Guest Log:     "exeErrorDiag": "",
2026-02-06 11:26:04 (23448): Guest Log:     "pilotErrorCode": 0,
2026-02-06 11:26:04 (23448): Guest Log:     "pilotErrorDiag": "",
2026-02-06 11:26:04 (23448): Guest Log:  *** Listing of results directory ***
2026-02-06 11:26:04 (23448): Guest Log: total 184816
2026-02-06 11:26:04 (23448): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 07:38 pilot3.tar.gz
2026-02-06 11:26:04 (23448): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 07:40 runpilot2-wrapper.sh
2026-02-06 11:26:04 (23448): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 07:41 queuedata.json
2026-02-06 11:26:04 (23448): Guest Log: -rwxr-xr-x. 1 atlas atlas      9275 Feb  6 16:11 init_data.xml
2026-02-06 11:26:04 (23448): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  6 16:11 start_atlas.sh
2026-02-06 11:26:04 (23448): Guest Log: -rwxr-xr-x. 1 atlas atlas    597944 Feb  6 16:11 input.tar.gz
2026-02-06 11:26:04 (23448): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  6 16:11 EVNT.48442027._000043.pool.root.1 -> /data/./ATLAS.root_0
2026-02-06 11:26:04 (23448): Guest Log: -rw-r--r--. 1 atlas atlas      2528 Feb  6 16:12 pandaJob.out
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas        50 Feb  6 16:12 setup.sh.local
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas   1009512 Feb  6 16:12 agis_schedconf.cvmfs.json
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  6 16:12 agis_ddmendpoints.agis.ALL.json
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas       420 Feb  6 16:12 workernode_map.json
2026-02-06 11:26:04 (23448): Guest Log: drwx------. 5 atlas atlas      4096 Feb  6 16:12 pilot3
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas 183411618 Feb  6 17:24 HITS.48442031._002141.pool.root.1
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas      1024 Feb  6 17:24 memory_monitor_summary.json
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas    351017 Feb  6 17:24 log.48442031._002141.job.log.tgz.1
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas      6327 Feb  6 17:24 heartbeat.json
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas        95 Feb  6 17:25 pilot_heartbeat.json
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas      5388 Feb  6 17:25 pilotlog.txt
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas    630595 Feb  6 17:25 log.48442031._002141.job.log.1
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas       357 Feb  6 17:25 output.list
2026-02-06 11:26:04 (23448): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  6 17:25 runtime_log
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas   1003520 Feb  6 17:25 result.tar.gz
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas       649 Feb  6 17:25 TnOLDmxcV88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsQYKDmEhvOYm.diag
2026-02-06 11:26:04 (23448): Guest Log: -rw-r--r--. 1 atlas atlas      9225 Feb  6 17:25 runtime_log.err
2026-02-06 11:26:04 (23448): Guest Log: Looking for outputfile HITS.48442031._002141.pool.root.1
2026-02-06 11:26:04 (23448): Guest Log: HITS file was successfully produced
2026-02-06 11:26:04 (23448): Guest Log: -rw-------. 1 atlas atlas 183411618 Feb  6 17:24 /home/atlas/RunAtlas/HITS.48442031._002141.pool.root.1
2026-02-06 11:26:04 (23448): Guest Log: Successfully finished the ATLAS job!
2026-02-06 11:26:04 (23448): Guest Log: Copying the results back to the shared directory!
2026-02-06 11:26:04 (23448): Guest Log:  *** Contents of shared directory: ***
2026-02-06 11:26:04 (23448): Guest Log: total 661396
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root 492222651 Feb  6 16:09 ATLAS.root_0
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root 183411618 Feb  6  2026 HITS.pool.root.1
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root      9275 Feb  6 16:09 init_data.xml
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root    597944 Feb  6 15:45 input.tar.gz
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root   1003520 Feb  6  2026 result.tar.gz
2026-02-06 11:26:04 (23448): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 15:45 start_atlas.sh
2026-02-06 11:26:04 (23448): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-06 11:26:04 (23448): VM Completion File Detected.
2026-02-06 11:26:04 (23448): Powering off VM.
2026-02-06 11:26:05 (23448): Successfully stopped VM.
2026-02-06 11:26:05 (23448): Deregistering VM. (boinc_45fab5433f2266de, slot#1)
2026-02-06 11:26:05 (23448): Removing network bandwidth throttle group from VM.
2026-02-06 11:26:05 (23448): Removing VM from VirtualBox.
2026-02-06 11:26:11 (23448): called boinc_finish(0)

</stderr_txt>
]]>

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