Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:39:25 (2159306): wrapper (7.7.26015): starting
00:39:25 (2159306): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 00:39:25] Arguments: --nthreads 2
[2026-02-07 00:39:25] Threads: 2
[2026-02-07 00:39:25] Checking for CVMFS
[2026-02-07 00:39:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 00:39:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 00:39:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 00:39:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 00:39:26] 2.9.2.0 2050517 1116 56180 155964 2 50 33291906 36864001 0 130560 0 326679 99.976 47587 21149 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 00:39:26] CVMFS is ok
[2026-02-07 00:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 00:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 00:39:26] Further information can be found at the LHC@home message board.
[2026-02-07 00:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 00:39:26] Checking for apptainer binary...
[2026-02-07 00:39:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 00:39:26] Running /usr/bin/apptainer --version
[2026-02-07 00:39:26] apptainer version 1.4.1-1.1
[2026-02-07 00:39:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 00:39:26] atlasA229
[2026-02-07 00:39:26] apptainer works
[2026-02-07 00:39:26] Set ATHENA_PROC_NUMBER=2
[2026-02-07 00:39:26] Set ATHENA_CORE_NUMBER=2
[2026-02-07 00:39:26] Starting ATLAS job with PandaID=6996642922
[2026-02-07 00:39:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 02:55:19]  *** The last 200 lines of the pilot log: ***
[2026-02-07 02:55:19] 2026-02-07 01:54:49,988 | INFO     | aborting loop
[2026-02-07 02:55:19] 2026-02-07 01:54:50,390 | INFO     | [job] retrieve thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,391 | INFO     | [job] queue monitor thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,528 | INFO     | [payload] control thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,638 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,665 | INFO     | [job] control thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,878 | INFO     | [data] control thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,989 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:50,994 | INFO     | [job] job monitor thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,031 | INFO     | [payload] failed_post thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,050 | INFO     | [job] validate thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 02:55:19] 2026-02-07 01:54:51,191 | INFO     | [data] copytool_in thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,226 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,563 | INFO     | [payload] validate_post thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:51,787 | INFO     | [data] copytool_out thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:55,144 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 02:55:19] 2026-02-07 01:54:58,460 | INFO     | [monitor] cgroup control has ended
[2026-02-07 02:55:19] 2026-02-07 01:54:59,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433961084736)>', '<ExcThread(monitor, started 140433334195968)>']
[2026-02-07 02:55:19] 2026-02-07 01:55:04,546 | INFO     | all workflow threads have been joined
[2026-02-07 02:55:19] 2026-02-07 01:55:04,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 02:55:19] 2026-02-07 01:55:04,547 | INFO     | traces error code: 0
[2026-02-07 02:55:19] 2026-02-07 01:55:04,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 02:55:19] 2026-02-07 01:55:19,290 | INFO     | PID=2163332 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 02:55:19] 2026-02-07 01:55:19,291 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 02:55:19] 2026-02-07 01:55:19,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 02:55:19] 2026-02-07 01:55:19,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 02:55:19] 2026-02-07 01:55:19,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 02:55:19] 2026-02-07 01:55:19,291 | INFO     | [monitor] control thread has ended
[2026-02-07 02:55:19] 2026-02-07 01:55:19,330 [wrapper] ==== pilot stdout END ====
[2026-02-07 02:55:19] 2026-02-07 01:55:19,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 02:55:19] 2026-02-07 01:55:19,335 [wrapper] pilotpid: 2163332
[2026-02-07 02:55:19] 2026-02-07 01:55:19,338 [wrapper] Pilot exit status: 0
[2026-02-07 02:55:19] 2026-02-07 01:55:19,344 [wrapper] pandaids: 6996642922
[2026-02-07 02:55:19] 2026-02-07 01:55:19,358 [wrapper] cleanup supervisor_pilot 2172756 2163333
[2026-02-07 02:55:19] 2026-02-07 01:55:19,360 [wrapper] Test setup, not cleaning
[2026-02-07 02:55:19] 2026-02-07 01:55:19,362 [wrapper] apfmon messages muted
[2026-02-07 02:55:19] 2026-02-07 01:55:19,364 [wrapper] ==== wrapper stdout END ====
[2026-02-07 02:55:19] 2026-02-07 01:55:19,366 [wrapper] ==== wrapper stderr END ====
[2026-02-07 02:55:19]  *** Error codes and diagnostics ***
[2026-02-07 02:55:19]     "exeErrorCode": 0,
[2026-02-07 02:55:19]     "exeErrorDiag": "",
[2026-02-07 02:55:19]     "pilotErrorCode": 0,
[2026-02-07 02:55:19]     "pilotErrorDiag": "",
[2026-02-07 02:55:19]  *** Listing of results directory ***
[2026-02-07 02:55:19] total 734056
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc    584627 Feb  6 10:13 pilot3.tar.gz
[2026-02-07 02:55:19] -rwx------ 1 boinc boinc     36322 Feb  6 10:16 runpilot2-wrapper.sh
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      5111 Feb  6 10:20 queuedata.json
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc       100 Feb  7 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 02:55:19] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 00:39 run_atlas
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc       105 Feb  7 00:39 job.xml
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc 544245277 Feb  7 00:39 EVNT.48318024._000085.pool.root.1
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc    597962 Feb  7 00:39 input.tar.gz
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc     15845 Feb  7 00:39 start_atlas.sh
[2026-02-07 02:55:19] drwxrwx--x 2 boinc boinc      4096 Feb  7 00:39 shared
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc         0 Feb  7 00:39 boinc_setup_complete
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      6206 Feb  7 00:39 init_data.xml
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc         0 Feb  7 00:39 boinc_lockfile
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      2527 Feb  7 00:39 pandaJob.out
[2026-02-07 02:55:19] -rw------- 1 boinc boinc   1009520 Feb  7 00:39 agis_schedconf.cvmfs.json
[2026-02-07 02:55:19] -rw------- 1 boinc boinc   1513088 Feb  7 00:39 agis_ddmendpoints.agis.ALL.json
[2026-02-07 02:55:19] -rw------- 1 boinc boinc       429 Feb  7 00:39 workernode_map.json
[2026-02-07 02:55:19] drwx------ 5 boinc boinc      4096 Feb  7 00:39 pilot3
[2026-02-07 02:55:19] -rw------- 1 boinc boinc 200568144 Feb  7 02:54 HITS.48318026._004248.pool.root.1
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc       530 Feb  7 02:54 boinc_task_state.xml
[2026-02-07 02:55:19] -rw------- 1 boinc boinc      1015 Feb  7 02:54 memory_monitor_summary.json
[2026-02-07 02:55:19] -rw------- 1 boinc boinc    309918 Feb  7 02:54 log.48318026._004248.job.log.tgz.1
[2026-02-07 02:55:19] -rw------- 1 boinc boinc      6310 Feb  7 02:54 heartbeat.json
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc        27 Feb  7 02:55 wrapper_checkpoint.txt
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      8192 Feb  7 02:55 boinc_mmap_file
[2026-02-07 02:55:19] -rw------- 1 boinc boinc       747 Feb  7 02:55 pilotlog.txt
[2026-02-07 02:55:19] -rw------- 1 boinc boinc        95 Feb  7 02:55 pilot_heartbeat.json
[2026-02-07 02:55:19] -rw------- 1 boinc boinc   1159200 Feb  7 02:55 log.48318026._004248.job.log.1
[2026-02-07 02:55:19] -rw------- 1 boinc boinc       357 Feb  7 02:55 output.list
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc       620 Feb  7 02:55 runtime_log
[2026-02-07 02:55:19] -rw------- 1 boinc boinc   1484800 Feb  7 02:55 result.tar.gz
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      8911 Feb  7 02:55 runtime_log.err
[2026-02-07 02:55:19] -rw------- 1 boinc boinc       660 Feb  7 02:55 FHLNDmX8W88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0jYKDmBcR7Jn.diag
[2026-02-07 02:55:19] -rw-r--r-- 1 boinc boinc      6507 Feb  7 02:55 stderr.txt
[2026-02-07 02:55:19] HITS file was successfully produced:
[2026-02-07 02:55:19] -rw------- 1 boinc boinc 200568144 Feb  7 02:54 shared/HITS.pool.root.1
[2026-02-07 02:55:19]  *** Contents of shared directory: ***
[2026-02-07 02:55:19] total 729420
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc 544245277 Feb  7 00:39 ATLAS.root_0
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc    597962 Feb  7 00:39 input.tar.gz
[2026-02-07 02:55:19] -rw-r--r-- 2 boinc boinc     15845 Feb  7 00:39 start_atlas.sh
[2026-02-07 02:55:19] -rw------- 1 boinc boinc 200568144 Feb  7 02:54 HITS.pool.root.1
[2026-02-07 02:55:19] -rw------- 1 boinc boinc   1484800 Feb  7 02:55 result.tar.gz
02:55:41 (2159306): run_atlas exited; CPU time 15787.330023
02:55:41 (2159306): called boinc_finish(0)

</stderr_txt>
]]>

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