Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:29 (4152339): wrapper (7.7.26015): starting
20:53:29 (4152339): wrapper: running run_atlas (--nthreads 3)
[2026-02-06 20:53:29] Arguments: --nthreads 3
[2026-02-06 20:53:29] Threads: 3
[2026-02-06 20:53:29] Checking for CVMFS
[2026-02-06 20:53:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 20:53:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 20:53:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 20:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 20:53:29] 2.9.2.0 4040518 695 67840 155958 2 50 25638212 36864000 0 130560 0 320000 99.979 29032 7988 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 20:53:29] CVMFS is ok
[2026-02-06 20:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 20:53:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 20:53:29] Further information can be found at the LHC@home message board.
[2026-02-06 20:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 20:53:29] Checking for apptainer binary...
[2026-02-06 20:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 20:53:29] Running /usr/bin/apptainer --version
[2026-02-06 20:53:29] apptainer version 1.4.1-1.1
[2026-02-06 20:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 20:53:29] atlasA228b
[2026-02-06 20:53:29] apptainer works
[2026-02-06 20:53:29] Set ATHENA_PROC_NUMBER=3
[2026-02-06 20:53:29] Set ATHENA_CORE_NUMBER=3
[2026-02-06 20:53:29] Starting ATLAS job with PandaID=6996583590
[2026-02-06 20:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 22:06:49]  *** The last 200 lines of the pilot log: ***
[2026-02-06 22:06:49] 2026-02-06 21:05:57,058 | INFO     | all payload control threads have been joined
[2026-02-06 22:06:49] 2026-02-06 21:05:57,087 | INFO     | all data control threads have been joined
[2026-02-06 22:06:49] 2026-02-06 21:05:57,690 | INFO     | [job] retrieve thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:57,691 | INFO     | [job] queue monitor thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:57,736 | INFO     | [payload] failed_post thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:57,796 | INFO     | all job control threads have been joined
[2026-02-06 22:06:49] 2026-02-06 21:05:57,903 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,057 | INFO     | [job] job monitor thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,064 | INFO     | [payload] control thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,092 | INFO     | [data] control thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,299 | INFO     | [job] validate thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,408 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,408 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,434 | INFO     | [payload] validate_post thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,466 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,564 | INFO     | [data] copytool_in thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,691 | INFO     | [data] copytool_out thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:58,802 | INFO     | [job] control thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:05:59,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 22:06:49] 2026-02-06 21:06:03,033 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 22:06:49] 2026-02-06 21:06:26,836 | INFO     | PID=4156386 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 22:06:49] 2026-02-06 21:06:26,836 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 22:06:49] 2026-02-06 21:06:26,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 22:06:49] 2026-02-06 21:06:26,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 22:06:49] 2026-02-06 21:06:44,405 | INFO     | [monitor] cgroup control has ended
[2026-02-06 22:06:49] 2026-02-06 21:06:44,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839129581376)>', '<ExcThread(monitor, started 139838847465216)>']
[2026-02-06 22:06:49] 2026-02-06 21:06:44,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 22:06:49] 2026-02-06 21:06:44,929 | INFO     | [monitor] control thread has ended
[2026-02-06 22:06:49] 2026-02-06 21:06:49,559 | INFO     | all workflow threads have been joined
[2026-02-06 22:06:49] 2026-02-06 21:06:49,559 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 22:06:49] 2026-02-06 21:06:49,559 | INFO     | traces error code: 0
[2026-02-06 22:06:49] 2026-02-06 21:06:49,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 22:06:49] 2026-02-06 21:06:49,613 [wrapper] ==== pilot stdout END ====
[2026-02-06 22:06:49] 2026-02-06 21:06:49,615 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 22:06:49] 2026-02-06 21:06:49,617 [wrapper] pilotpid: 4156386
[2026-02-06 22:06:49] 2026-02-06 21:06:49,620 [wrapper] Pilot exit status: 0
[2026-02-06 22:06:49] 2026-02-06 21:06:49,628 [wrapper] pandaids: 6996583590
[2026-02-06 22:06:49] 2026-02-06 21:06:49,647 [wrapper] cleanup supervisor_pilot 4165735 4156387
[2026-02-06 22:06:49] 2026-02-06 21:06:49,649 [wrapper] Test setup, not cleaning
[2026-02-06 22:06:49] 2026-02-06 21:06:49,652 [wrapper] apfmon messages muted
[2026-02-06 22:06:49] 2026-02-06 21:06:49,654 [wrapper] ==== wrapper stdout END ====
[2026-02-06 22:06:49] 2026-02-06 21:06:49,657 [wrapper] ==== wrapper stderr END ====
[2026-02-06 22:06:49]  *** Error codes and diagnostics ***
[2026-02-06 22:06:49]     "exeErrorCode": 0,
[2026-02-06 22:06:49]     "exeErrorDiag": "",
[2026-02-06 22:06:49]     "pilotErrorCode": 0,
[2026-02-06 22:06:49]     "pilotErrorDiag": "",
[2026-02-06 22:06:49]  *** Listing of results directory ***
[2026-02-06 22:06:49] total 659812
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc    584627 Feb  6 10:13 pilot3.tar.gz
[2026-02-06 22:06:49] -rwx------ 1 boinc boinc     36322 Feb  6 10:13 runpilot2-wrapper.sh
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      5111 Feb  6 10:13 queuedata.json
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc       100 Feb  6 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 22:06:49] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 20:53 run_atlas
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc       105 Feb  6 20:53 job.xml
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc 491853320 Feb  6 20:53 EVNT.48310747._000099.pool.root.1
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc    597951 Feb  6 20:53 input.tar.gz
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc     15845 Feb  6 20:53 start_atlas.sh
[2026-02-06 22:06:49] drwxrwx--x 2 boinc boinc      4096 Feb  6 20:53 shared
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc         0 Feb  6 20:53 boinc_setup_complete
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      6449 Feb  6 20:53 init_data.xml
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc         0 Feb  6 20:53 boinc_lockfile
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      2522 Feb  6 20:53 pandaJob.out
[2026-02-06 22:06:49] -rw------- 1 boinc boinc   1009512 Feb  6 20:53 agis_schedconf.cvmfs.json
[2026-02-06 22:06:49] -rw------- 1 boinc boinc   1513088 Feb  6 20:53 agis_ddmendpoints.agis.ALL.json
[2026-02-06 22:06:49] -rw------- 1 boinc boinc       426 Feb  6 20:53 workernode_map.json
[2026-02-06 22:06:49] drwx------ 5 boinc boinc      4096 Feb  6 20:53 pilot3
[2026-02-06 22:06:49] -rw------- 1 boinc boinc 178084453 Feb  6 22:05 HITS.48310749._005037.pool.root.1
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc       530 Feb  6 22:05 boinc_task_state.xml
[2026-02-06 22:06:49] -rw------- 1 boinc boinc      1025 Feb  6 22:05 memory_monitor_summary.json
[2026-02-06 22:06:49] -rw------- 1 boinc boinc    246731 Feb  6 22:05 log.48310749._005037.job.log.tgz.1
[2026-02-06 22:06:49] -rw------- 1 boinc boinc      6306 Feb  6 22:05 heartbeat.json
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      8192 Feb  6 22:06 boinc_mmap_file
[2026-02-06 22:06:49] -rw------- 1 boinc boinc        95 Feb  6 22:06 pilot_heartbeat.json
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc        27 Feb  6 22:06 wrapper_checkpoint.txt
[2026-02-06 22:06:49] -rw------- 1 boinc boinc      4934 Feb  6 22:06 pilotlog.txt
[2026-02-06 22:06:49] -rw------- 1 boinc boinc    642875 Feb  6 22:06 log.48310749._005037.job.log.1
[2026-02-06 22:06:49] -rw------- 1 boinc boinc       357 Feb  6 22:06 output.list
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc       620 Feb  6 22:06 runtime_log
[2026-02-06 22:06:49] -rw------- 1 boinc boinc    911360 Feb  6 22:06 result.tar.gz
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      8916 Feb  6 22:06 runtime_log.err
[2026-02-06 22:06:49] -rw------- 1 boinc boinc       661 Feb  6 22:06 3HnNDmQ5W88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEaYKDmPzXMVo.diag
[2026-02-06 22:06:49] -rw-r--r-- 1 boinc boinc      6738 Feb  6 22:06 stderr.txt
[2026-02-06 22:06:49] HITS file was successfully produced:
[2026-02-06 22:06:49] -rw------- 1 boinc boinc 178084453 Feb  6 22:05 shared/HITS.pool.root.1
[2026-02-06 22:06:49]  *** Contents of shared directory: ***
[2026-02-06 22:06:49] total 655740
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc 491853320 Feb  6 20:53 ATLAS.root_0
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc    597951 Feb  6 20:53 input.tar.gz
[2026-02-06 22:06:49] -rw-r--r-- 2 boinc boinc     15845 Feb  6 20:53 start_atlas.sh
[2026-02-06 22:06:49] -rw------- 1 boinc boinc 178084453 Feb  6 22:05 HITS.pool.root.1
[2026-02-06 22:06:49] -rw------- 1 boinc boinc    911360 Feb  6 22:06 result.tar.gz
22:06:50 (4152339): run_atlas exited; CPU time 12305.757419
22:06:50 (4152339): called boinc_finish(0)

</stderr_txt>
]]>

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