Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:01:51 (237773): wrapper (7.7.26015): starting
11:01:51 (237773): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 11:01:51] Arguments: --nthreads 8
[2026-02-06 11:01:51] Threads: 8
[2026-02-06 11:01:51] Checking for CVMFS
[2026-02-06 11:01:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 11:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 11:01:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 11:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 11:01:51] 2.11.3.0 956321 97401 159676 155956 1 404 34265118 45568000 15549 130560 0 515572685 99.784 345786449 18975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 11:01:51] CVMFS is ok
[2026-02-06 11:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 11:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 11:01:51] Further information can be found at the LHC@home message board.
[2026-02-06 11:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 11:01:51] Checking for apptainer binary...
[2026-02-06 11:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 11:01:51] Running /usr/bin/apptainer --version
[2026-02-06 11:01:51] apptainer version 1.4.1-1.el9
[2026-02-06 11:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 11:01:52] wns0016.triumf.lcg
[2026-02-06 11:01:52] apptainer works
[2026-02-06 11:01:52] Set ATHENA_PROC_NUMBER=8
[2026-02-06 11:01:52] Set ATHENA_CORE_NUMBER=8
[2026-02-06 11:01:52] Starting ATLAS job with PandaID=7003982647
[2026-02-06 11:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 11:05:35]  *** The last 200 lines of the pilot log: ***
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | WARNING  | wrong length of table data, x=[1770404565.0], y=[1001.0] (must be same and length>=4)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . Timing measurements:
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . get job = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . initial setup = 9 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . payload setup = 10 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-in = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . payload execution = 23 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-out = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . log creation = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982647/pilotlog.txt
[2026-02-06 11:05:35] 2026-02-06 19:05:02,453 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 11:05:35] - Log from pilotlog.txt -
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | found no stored workdir sizes
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | WARNING  | wrong length of table data, x=[1770404565.0], y=[1001.0] (must be same and length>=4)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . Timing measurements:
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . get job = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . initial setup = 9 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . payload setup = 10 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-in = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . payload execution = 23 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-out = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . log creation = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982647/pilotlog.txt
[2026-02-06 11:05:35] 2026-02-06 19:05:02,453 | WARNING  | 
[2026-02-06 11:05:35] [begin log extracts]
[2026-02-06 11:05:35] - Log from pilotlog.txt -
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | WARNING  | found no stored workdir sizes
[2026-02-06 11:05:35] 2026-02-06 19:05:02,392 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | WARNING  | wrong length of table data, x=[1770404565.0], y=[1001.0] (must be same and length>=4)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . Timing measurements:
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . get job = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . initial setup = 9 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,393 | INFO     | . payload setup = 10 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-in = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . payload execution = 23 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . stage-out = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | . log creation = 0 s
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | ..............................
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:05:35] 2026-02-06 19:05:02,394 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982647/pilotlog.txt
[2026-02-06 11:05:35] [end log extracts]
[2026-02-06 11:05:35] 2026-02-06 19:05:02,453 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 11:05:35] 2026-02-06 19:05:02,454 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 11:05:35] 2026-02-06 19:05:03,228 | INFO     | 
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | job summary report
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | --------------------------------------------------
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | PanDA job id: 7003982647
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | task id: 48317892
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 11:02:57,386 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | pilot state: failed 
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | transexitcode: 65
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | exeerrorcode: 65
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | exitcode: 65
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 11:05:35] 2026-02-06 19:05:03,229 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | nevents: 0
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | neventsw: 0
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | pid: 246002
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | pgrp: 246002
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | corecount: 8
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | event service: False
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | sizes: {0: 2281901, 1: 2283016, 12: 2283016, 37: 2310468, 40: 2310468, 156: 2310634}
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | --------------------------------------------------
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | 
[2026-02-06 11:05:35] 2026-02-06 19:05:03,230 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 11:05:35] 2026-02-06 19:05:03,491 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,491 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,492 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | job 7003982647 has completed (purged errors)
[2026-02-06 11:05:35] 2026-02-06 19:05:03,502 | INFO     | overall cleanup function is called
[2026-02-06 11:05:35] 2026-02-06 19:05:04,509 | INFO     | --- collectZombieJob: --- 10, [246002]
[2026-02-06 11:05:35] 2026-02-06 19:05:04,509 | INFO     | zombie collector waiting for pid 246002
[2026-02-06 11:05:35] 2026-02-06 19:05:04,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 11:05:35] 2026-02-06 19:05:04,509 | INFO     | collected zombie processes
[2026-02-06 11:05:35] 2026-02-06 19:05:04,509 | INFO     | will attempt to kill all subprocesses of pid=246002
[2026-02-06 11:05:35] 2026-02-06 19:05:04,923 | INFO     | process IDs to be killed: [246002] (in reverse order)
[2026-02-06 11:05:35] 2026-02-06 19:05:04,989 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 11:05:35] 2026-02-06 19:05:04,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 11:05:35] 2026-02-06 19:05:05,002 | INFO     | did not find any defunct processes belonging to 246002
[2026-02-06 11:05:35] 2026-02-06 19:05:05,008 | INFO     | did not find any defunct processes belonging to 246002
[2026-02-06 11:05:35] 2026-02-06 19:05:05,008 | INFO     | ready for new job
[2026-02-06 11:05:35] 2026-02-06 19:05:05,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 11:05:35] 2026-02-06 19:05:05,009 | INFO     | **************************************
[2026-02-06 11:05:35] 2026-02-06 19:05:05,009 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 11:05:35] 2026-02-06 19:05:05,009 | INFO     | **************************************
[2026-02-06 11:05:35] 2026-02-06 19:05:05,009 | INFO     | 
[2026-02-06 11:05:35] 2026-02-06 19:05:05,011 | INFO     | architecture information:
[2026-02-06 11:05:35] 2026-02-06 19:05:05,011 | INFO     | executing command: cat /etc/os-release
[2026-02-06 11:05:35] 2026-02-06 19:05:05,042 | INFO     | cat /etc/os-release:
[2026-02-06 11:05:35] NAME="CentOS Linux"
[2026-02-06 11:05:35] VERSION="7 (Core)"
[2026-02-06 11:05:35] ID="centos"
[2026-02-06 11:05:35] ID_LIKE="rhel fedora"
[2026-02-06 11:05:35] VERSION_ID="7"
[2026-02-06 11:05:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 11:05:35] ANSI_COLOR="0;31"
[2026-02-06 11:05:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 11:05:35] HOME_URL="https://www.centos.org/"
[2026-02-06 11:05:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 11:05:35] 
[2026-02-06 11:05:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 11:05:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 11:05:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 11:05:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 11:05:35] 
[2026-02-06 11:05:35] 2026-02-06 19:05:05,042 | INFO     | **************************************
[2026-02-06 11:05:35] 2026-02-06 19:05:05,546 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 11:05:35] 2026-02-06 19:05:05,572 | INFO     | sufficient remaining disk space (1403215937536 B)
[2026-02-06 11:05:35] 2026-02-06 19:05:05,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 11:05:35] 2026-02-06 19:05:05,572 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 11:05:35] 2026-02-06 19:05:05,572 | INFO     | update_server=False
[2026-02-06 11:05:35] 2026-02-06 19:05:05,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 11:05:35] 2026-02-06 19:05:05,639 | INFO     | all data control threads have been joined
[2026-02-06 11:05:35] 2026-02-06 19:05:05,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 11:05:35] 2026-02-06 19:05:05,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 11:05:35] 2026-02-06 19:05:05,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 11:05:35] 2026-02-06 19:05:05,823 | INFO     | will abort loop
[2026-02-06 11:05:35] 2026-02-06 19:05:05,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 11:05:35] 2026-02-06 19:05:06,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 11:05:35] 2026-02-06 19:05:06,585 | INFO     | [payload] validate_post thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:06,589 | INFO     | [job] retrieve thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:06,589 | INFO     | all payload control threads have been joined
[2026-02-06 11:05:35] 2026-02-06 19:05:06,649 | INFO     | [data] control thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:06,829 | INFO     | [job] job monitor thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,151 | INFO     | [job] validate thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,283 | INFO     | all job control threads have been joined
[2026-02-06 11:05:35] 2026-02-06 19:05:07,300 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,375 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,595 | INFO     | [payload] control thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,656 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,721 | INFO     | [data] copytool_in thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,871 | INFO     | [data] copytool_out thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:07,929 | INFO     | [payload] failed_post thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:08,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 11:05:35] 2026-02-06 19:05:08,289 | INFO     | [job] control thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:09,248 | INFO     | [job] queue monitor thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:10,131 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 11:05:35] 2026-02-06 19:05:15,163 | INFO     | [monitor] cgroup control has ended
[2026-02-06 11:05:35] 2026-02-06 19:05:16,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650459338560)>', '<ExcThread(monitor, started 139649787885312)>']
[2026-02-06 11:05:35] 2026-02-06 19:05:21,961 | INFO     | all workflow threads have been joined
[2026-02-06 11:05:35] 2026-02-06 19:05:21,962 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 11:05:35] 2026-02-06 19:05:21,962 | INFO     | traces error code: 0
[2026-02-06 11:05:35] 2026-02-06 19:05:21,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 11:05:35] 2026-02-06 19:05:35,292 | INFO     | PID=241436 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 11:05:35] 2026-02-06 19:05:35,293 | INFO     | .. there are 26 such processes running
[2026-02-06 11:05:35] 2026-02-06 19:05:35,294 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 11:05:35] 2026-02-06 19:05:35,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 11:05:35] 2026-02-06 19:05:35,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 11:05:35] 2026-02-06 19:05:35,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 11:05:35] 2026-02-06 19:05:35,295 | CRITICAL | thread 'MainThread' is not alive
[2026-02-06 11:05:35] 2026-02-06 19:05:35,295 | INFO     | [monitor] control thread has ended
[2026-02-06 11:05:35] 2026-02-06 19:05:35,407 [wrapper] ==== pilot stdout END ====
[2026-02-06 11:05:35] 2026-02-06 19:05:35,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 11:05:35] 2026-02-06 19:05:35,411 [wrapper] pilotpid: 241436
[2026-02-06 11:05:35] 2026-02-06 19:05:35,413 [wrapper] Pilot exit status: 0
[2026-02-06 11:05:35] 2026-02-06 19:05:35,448 [wrapper] pandaids: 7003982647
[2026-02-06 11:05:35] 2026-02-06 19:05:35,484 [wrapper] cleanup supervisor_pilot  241442 241437
[2026-02-06 11:05:35] 2026-02-06 19:05:35,490 [wrapper] Test setup, not cleaning
[2026-02-06 11:05:35] 2026-02-06 19:05:35,492 [wrapper] apfmon messages muted
[2026-02-06 11:05:35] 2026-02-06 19:05:35,494 [wrapper] ==== wrapper stdout END ====
[2026-02-06 11:05:35] 2026-02-06 19:05:35,496 [wrapper] ==== wrapper stderr END ====
[2026-02-06 11:05:35]  *** Error codes and diagnostics ***
[2026-02-06 11:05:35]     "exeErrorCode": 65,
[2026-02-06 11:05:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 11:05:35]     "pilotErrorCode": 1305,
[2026-02-06 11:05:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 11:05:35]  *** Listing of results directory ***
[2026-02-06 11:05:35] total 484364
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc    584627 Feb  6 06:32 pilot3.tar.gz
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc      5111 Feb  6 06:35 queuedata.json
[2026-02-06 11:05:35] -rwx------. 1 boinc boinc     36322 Feb  6 06:35 runpilot2-wrapper.sh
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc       100 Feb  6 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 11:05:35] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 11:01 run_atlas
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc       105 Feb  6 11:01 job.xml
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc 491851068 Feb  6 11:01 EVNT.48317889._000257.pool.root.1
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc      6444 Feb  6 11:01 init_data.xml
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc     15845 Feb  6 11:01 start_atlas.sh
[2026-02-06 11:05:35] drwxrwx--x. 2 boinc boinc      4096 Feb  6 11:01 shared
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc    597953 Feb  6 11:01 input.tar.gz
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc         0 Feb  6 11:01 boinc_lockfile
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc      2523 Feb  6 11:01 pandaJob.out
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc   1009512 Feb  6 11:02 agis_schedconf.cvmfs.json
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc   1513088 Feb  6 11:02 agis_ddmendpoints.agis.ALL.json
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc       436 Feb  6 11:02 workernode_map.json
[2026-02-06 11:05:35] drwx------. 5 boinc boinc      4096 Feb  6 11:02 pilot3
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc       522 Feb  6 11:02 boinc_task_state.xml
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc       948 Feb  6 11:03 memory_monitor_summary.json
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc     21477 Feb  6 11:03 log.48317892._014694.job.log.tgz.1
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc      7002 Feb  6 11:05 heartbeat.json
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc      8192 Feb  6 11:05 boinc_mmap_file
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc        22 Feb  6 11:05 wrapper_checkpoint.txt
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc        95 Feb  6 11:05 pilot_heartbeat.json
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc       892 Feb  6 11:05 pilotlog.txt
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc     81389 Feb  6 11:05 log.48317892._014694.job.log.1
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc       188 Feb  6 11:05 output.list
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc       620 Feb  6 11:05 runtime_log
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc    122880 Feb  6 11:05 result.tar.gz
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc       644 Feb  6 11:05 zEONDmI7b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCEZKDmRucbDo.diag
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc      8633 Feb  6 11:05 runtime_log.err
[2026-02-06 11:05:35] -rw-r--r--. 1 boinc boinc     21634 Feb  6 11:05 stderr.txt
[2026-02-06 11:05:35] No HITS result produced
[2026-02-06 11:05:35]  *** Contents of shared directory: ***
[2026-02-06 11:05:35] total 481048
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc 491851068 Feb  6 11:01 ATLAS.root_0
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc     15845 Feb  6 11:01 start_atlas.sh
[2026-02-06 11:05:35] -rw-r--r--. 2 boinc boinc    597953 Feb  6 11:01 input.tar.gz
[2026-02-06 11:05:35] -rw-------. 1 boinc boinc    122880 Feb  6 11:05 result.tar.gz
11:05:37 (237773): run_atlas exited; CPU time 19.747144
11:05:37 (237773): called boinc_finish(0)

</stderr_txt>
]]>

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