Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:36 (3325595): wrapper (7.7.26015): starting
11:27:36 (3325595): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 11:27:36] Arguments: --nthreads 12
[2026-02-06 11:27:36] Threads: 12
[2026-02-06 11:27:36] Checking for CVMFS
[2026-02-06 11:27:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 11:27:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 11:27:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 11:27:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 11:27:38] 2.11.5.0 3295111 97306 247612 155958 2 395 33915335 45568000 26784 130560 0 865110971 99.818 466924416 19747 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 11:27:38] CVMFS is ok
[2026-02-06 11:27:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 11:27:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 11:27:38] Further information can be found at the LHC@home message board.
[2026-02-06 11:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 11:27:38] Checking for apptainer binary...
[2026-02-06 11:27:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 11:27:38] Running /usr/bin/apptainer --version
[2026-02-06 11:27:38] apptainer version 1.4.1-1.el9
[2026-02-06 11:27:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 11:27:39] wns0096.triumf.lcg
[2026-02-06 11:27:39] apptainer works
[2026-02-06 11:27:39] Set ATHENA_PROC_NUMBER=12
[2026-02-06 11:27:39] Set ATHENA_CORE_NUMBER=12
[2026-02-06 11:27:39] Starting ATLAS job with PandaID=7004058196
[2026-02-06 11:27:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 11:32:53]  *** The last 200 lines of the pilot log: ***
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | wrong length of table data, x=[1770406179.0], y=[1050.0] (must be same and length>=4)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | could have reported an average CPU frequency of 2770 MHz (4 samples)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . Timing measurements:
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . get job = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . initial setup = 30 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . payload setup = 22 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-in = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . payload execution = 45 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-out = 1 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . log creation = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004058196/pilotlog.txt
[2026-02-06 11:32:53] 2026-02-06 19:32:08,973 | INFO     | time since job start (203s) is within the limit (349056.0s)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,059 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 11:32:53] - Log from pilotlog.txt -
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | INFO     | extracted standard info from prmon json
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | wrong length of table data, x=[1770406179.0], y=[1050.0] (must be same and length>=4)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | could have reported an average CPU frequency of 2770 MHz (4 samples)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . Timing measurements:
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . get job = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . initial setup = 30 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . payload setup = 22 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-in = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . payload execution = 45 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-out = 1 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . log creation = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004058196/pilotlog.txt
[2026-02-06 11:32:53] 2026-02-06 19:32:08,973 | INFO     | time since job start (203s) is within the limit (349056.0s)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,059 | WARNING  | 
[2026-02-06 11:32:53] [begin log extracts]
[2026-02-06 11:32:53] - Log from pilotlog.txt -
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | INFO     | extracted standard info from prmon json
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 11:32:53] 2026-02-06 19:32:08,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | WARNING  | wrong length of table data, x=[1770406179.0], y=[1050.0] (must be same and length>=4)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | could have reported an average CPU frequency of 2770 MHz (4 samples)
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . Timing measurements:
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . get job = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . initial setup = 30 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,908 | INFO     | . payload setup = 22 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-in = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . payload execution = 45 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . stage-out = 1 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | . log creation = 0 s
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | ..............................
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 11:32:53] 2026-02-06 19:32:08,909 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004058196/pilotlog.txt
[2026-02-06 11:32:53] 2026-02-06 19:32:08,973 | INFO     | time since job start (203s) is within the limit (349056.0s)
[2026-02-06 11:32:53] [end log extracts]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,059 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,060 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | 
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | job summary report
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | --------------------------------------------------
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | PanDA job id: 7004058196
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | task id: 48317952
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 11:30:01,390 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | pilot state: failed 
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | transexitcode: 65
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | exeerrorcode: 65
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | exitcode: 65
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | nevents: 0
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | neventsw: 0
[2026-02-06 11:32:53] 2026-02-06 19:32:09,295 | INFO     | pid: 3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | pgrp: 3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | corecount: 12
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | event service: False
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | sizes: {0: 2282000, 1: 2282682, 2: 2283143, 13: 2283143, 71: 2306431, 72: 2306407, 73: 2310855, 75: 2310883, 191: 2311049}
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | --------------------------------------------------
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | 
[2026-02-06 11:32:53] 2026-02-06 19:32:09,296 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 11:32:53] 2026-02-06 19:32:09,506 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,506 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,506 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,506 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | job 7004058196 has completed (purged errors)
[2026-02-06 11:32:53] 2026-02-06 19:32:09,507 | INFO     | overall cleanup function is called
[2026-02-06 11:32:53] 2026-02-06 19:32:10,521 | INFO     | --- collectZombieJob: --- 10, [3334534]
[2026-02-06 11:32:53] 2026-02-06 19:32:10,521 | INFO     | zombie collector waiting for pid 3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:10,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 11:32:53] 2026-02-06 19:32:10,521 | INFO     | collected zombie processes
[2026-02-06 11:32:53] 2026-02-06 19:32:10,521 | INFO     | will attempt to kill all subprocesses of pid=3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:11,286 | INFO     | process IDs to be killed: [3334534] (in reverse order)
[2026-02-06 11:32:53] 2026-02-06 19:32:12,075 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 11:32:53] 2026-02-06 19:32:12,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 11:32:53] 2026-02-06 19:32:12,142 | INFO     | did not find any defunct processes belonging to 3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:12,184 | INFO     | did not find any defunct processes belonging to 3334534
[2026-02-06 11:32:53] 2026-02-06 19:32:12,184 | INFO     | ready for new job
[2026-02-06 11:32:53] 2026-02-06 19:32:12,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 11:32:53] 2026-02-06 19:32:12,197 | INFO     | **************************************
[2026-02-06 11:32:53] 2026-02-06 19:32:12,197 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 11:32:53] 2026-02-06 19:32:12,197 | INFO     | **************************************
[2026-02-06 11:32:53] 2026-02-06 19:32:12,198 | INFO     | 
[2026-02-06 11:32:53] 2026-02-06 19:32:12,199 | INFO     | architecture information:
[2026-02-06 11:32:53] 2026-02-06 19:32:12,216 | INFO     | executing command: cat /etc/os-release
[2026-02-06 11:32:53] 2026-02-06 19:32:12,305 | INFO     | cat /etc/os-release:
[2026-02-06 11:32:53] NAME="CentOS Linux"
[2026-02-06 11:32:53] VERSION="7 (Core)"
[2026-02-06 11:32:53] ID="centos"
[2026-02-06 11:32:53] ID_LIKE="rhel fedora"
[2026-02-06 11:32:53] VERSION_ID="7"
[2026-02-06 11:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 11:32:53] ANSI_COLOR="0;31"
[2026-02-06 11:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 11:32:53] HOME_URL="https://www.centos.org/"
[2026-02-06 11:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 11:32:53] 
[2026-02-06 11:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 11:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 11:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 11:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 11:32:53] 
[2026-02-06 11:32:53] 2026-02-06 19:32:12,305 | INFO     | **************************************
[2026-02-06 11:32:53] 2026-02-06 19:32:12,812 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 11:32:53] 2026-02-06 19:32:12,893 | INFO     | sufficient remaining disk space (2162400690176 B)
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | INFO     | update_server=False
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 11:32:53] 2026-02-06 19:32:12,894 | INFO     | aborting loop
[2026-02-06 11:32:53] 2026-02-06 19:32:13,146 | INFO     | all payload control threads have been joined
[2026-02-06 11:32:53] 2026-02-06 19:32:13,375 | INFO     | all job control threads have been joined
[2026-02-06 11:32:53] 2026-02-06 19:32:13,519 | INFO     | all data control threads have been joined
[2026-02-06 11:32:53] 2026-02-06 19:32:13,901 | INFO     | [job] retrieve thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:13,901 | INFO     | [job] job monitor thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,152 | INFO     | [payload] control thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 11:32:53] 2026-02-06 19:32:14,382 | INFO     | [job] control thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,391 | INFO     | [payload] validate_post thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,475 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,526 | INFO     | [data] control thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,683 | INFO     | [payload] failed_post thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,772 | INFO     | [job] validate thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,879 | INFO     | [data] copytool_in thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:14,903 | INFO     | [data] copytool_out thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:15,282 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:15,336 | INFO     | [job] queue monitor thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:15,364 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:16,915 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 11:32:53] 2026-02-06 19:32:42,916 | INFO     | PID=3329437 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 11:32:53] 2026-02-06 19:32:42,917 | INFO     | .. there are 49 such processes running
[2026-02-06 11:32:53] 2026-02-06 19:32:42,918 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 11:32:53] 2026-02-06 19:32:42,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 11:32:53] 2026-02-06 19:32:42,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 11:32:53] 2026-02-06 19:32:45,210 | INFO     | [monitor] cgroup control has ended
[2026-02-06 11:32:53] 2026-02-06 19:32:47,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878518859584)>', '<ExcThread(monitor, started 139878117385984)>']
[2026-02-06 11:32:53] 2026-02-06 19:32:47,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 11:32:53] 2026-02-06 19:32:47,955 | INFO     | [monitor] control thread has ended
[2026-02-06 11:32:53] 2026-02-06 19:32:52,041 | INFO     | all workflow threads have been joined
[2026-02-06 11:32:53] 2026-02-06 19:32:52,041 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 11:32:53] 2026-02-06 19:32:52,041 | INFO     | traces error code: 0
[2026-02-06 11:32:53] 2026-02-06 19:32:52,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 11:32:53] 2026-02-06 19:32:52,427 [wrapper] ==== pilot stdout END ====
[2026-02-06 11:32:53] 2026-02-06 19:32:52,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 11:32:53] 2026-02-06 19:32:52,468 [wrapper] pilotpid: 3329437
[2026-02-06 11:32:53] 2026-02-06 19:32:52,508 [wrapper] Pilot exit status: 0
[2026-02-06 11:32:53] 2026-02-06 19:32:52,634 [wrapper] pandaids: 7004058196
[2026-02-06 11:32:53] 2026-02-06 19:32:52,895 [wrapper] cleanup supervisor_pilot 3329443 3329438
[2026-02-06 11:32:53] 2026-02-06 19:32:52,897 [wrapper] Test setup, not cleaning
[2026-02-06 11:32:53] 2026-02-06 19:32:52,899 [wrapper] apfmon messages muted
[2026-02-06 11:32:53] 2026-02-06 19:32:52,901 [wrapper] ==== wrapper stdout END ====
[2026-02-06 11:32:53] 2026-02-06 19:32:52,902 [wrapper] ==== wrapper stderr END ====
[2026-02-06 11:32:53]  *** Error codes and diagnostics ***
[2026-02-06 11:32:53]     "exeErrorCode": 65,
[2026-02-06 11:32:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 11:32:53]     "pilotErrorCode": 1305,
[2026-02-06 11:32:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 11:32:53]  *** Listing of results directory ***
[2026-02-06 11:32:53] total 496844
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc    584627 Feb  6 06:32 pilot3.tar.gz
[2026-02-06 11:32:53] -rwx------. 1 boinc boinc     36322 Feb  6 06:34 runpilot2-wrapper.sh
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc      5111 Feb  6 06:35 queuedata.json
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc       100 Feb  6 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 11:32:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 11:27 run_atlas
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc       105 Feb  6 11:27 job.xml
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc      6594 Feb  6 11:27 init_data.xml
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc 504619585 Feb  6 11:27 EVNT.48317949._000255.pool.root.1
[2026-02-06 11:32:53] drwxrwx--x. 2 boinc boinc      4096 Feb  6 11:27 shared
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc    597951 Feb  6 11:27 input.tar.gz
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc     15845 Feb  6 11:27 start_atlas.sh
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc         0 Feb  6 11:27 boinc_lockfile
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc      2523 Feb  6 11:27 pandaJob.out
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc   1009512 Feb  6 11:28 agis_schedconf.cvmfs.json
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc   1513088 Feb  6 11:28 agis_ddmendpoints.agis.ALL.json
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc       444 Feb  6 11:28 workernode_map.json
[2026-02-06 11:32:53] drwx------. 5 boinc boinc      4096 Feb  6 11:28 pilot3
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc       524 Feb  6 11:30 boinc_task_state.xml
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc       964 Feb  6 11:30 memory_monitor_summary.json
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc     21286 Feb  6 11:30 log.48317952._013608.job.log.tgz.1
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc      7023 Feb  6 11:32 heartbeat.json
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc        95 Feb  6 11:32 pilot_heartbeat.json
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc        22 Feb  6 11:32 wrapper_checkpoint.txt
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc      8192 Feb  6 11:32 boinc_mmap_file
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc      4819 Feb  6 11:32 pilotlog.txt
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc     85581 Feb  6 11:32 log.48317952._013608.job.log.1
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc       188 Feb  6 11:32 output.list
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc       620 Feb  6 11:32 runtime_log
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc    122880 Feb  6 11:32 result.tar.gz
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc      8635 Feb  6 11:32 runtime_log.err
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc       643 Feb  6 11:32 jHnLDmX5b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwBZKDmp7V3hn.diag
[2026-02-06 11:32:53] -rw-r--r--. 1 boinc boinc     21745 Feb  6 11:32 stderr.txt
[2026-02-06 11:32:53] No HITS result produced
[2026-02-06 11:32:53]  *** Contents of shared directory: ***
[2026-02-06 11:32:53] total 493520
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc 504619585 Feb  6 11:27 ATLAS.root_0
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc    597951 Feb  6 11:27 input.tar.gz
[2026-02-06 11:32:53] -rw-r--r--. 2 boinc boinc     15845 Feb  6 11:27 start_atlas.sh
[2026-02-06 11:32:53] -rw-------. 1 boinc boinc    122880 Feb  6 11:32 result.tar.gz
11:32:55 (3325595): run_atlas exited; CPU time 21.916657
11:32:55 (3325595): called boinc_finish(0)

</stderr_txt>
]]>

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