Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:28:24 (3806032): wrapper (7.7.26015): starting
10:28:24 (3806032): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 10:28:24] Arguments: --nthreads 12
[2026-02-06 10:28:24] Threads: 12
[2026-02-06 10:28:24] Checking for CVMFS
[2026-02-06 10:28:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 10:28:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 10:28:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 10:28:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 10:28:26] 2.11.5.0 444197 97230 221136 155956 3 374 32862620 45568001 24081 130560 0 822926796 99.797 499499381 18677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 10:28:26] CVMFS is ok
[2026-02-06 10:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 10:28:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 10:28:26] Further information can be found at the LHC@home message board.
[2026-02-06 10:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 10:28:26] Checking for apptainer binary...
[2026-02-06 10:28:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 10:28:26] Running /usr/bin/apptainer --version
[2026-02-06 10:28:26] apptainer version 1.4.1-1.el9
[2026-02-06 10:28:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 10:28:27] wns0087.triumf.lcg
[2026-02-06 10:28:27] apptainer works
[2026-02-06 10:28:27] Set ATHENA_PROC_NUMBER=12
[2026-02-06 10:28:27] Set ATHENA_CORE_NUMBER=12
[2026-02-06 10:28:27] Starting ATLAS job with PandaID=7004057284
[2026-02-06 10:28:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 10:34:00]  *** The last 200 lines of the pilot log: ***
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | wrong length of table data, x=[1770402649.0], y=[2502.0] (must be same and length>=4)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . Timing measurements:
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . get job = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . initial setup = 33 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . payload setup = 26 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . stage-in = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . payload execution = 49 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . stage-out = 1 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . log creation = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057284/pilotlog.txt
[2026-02-06 10:34:00] 2026-02-06 18:33:24,694 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 10:34:00] - Log from pilotlog.txt -
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004057284/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | extracted standard info from prmon json
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | wrong length of table data, x=[1770402649.0], y=[2502.0] (must be same and length>=4)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . Timing measurements:
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . get job = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . initial setup = 33 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . payload setup = 26 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . stage-in = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . payload execution = 49 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . stage-out = 1 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . log creation = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057284/pilotlog.txt
[2026-02-06 10:34:00] 2026-02-06 18:33:24,695 | WARNING  | 
[2026-02-06 10:34:00] [begin log extracts]
[2026-02-06 10:34:00] - Log from pilotlog.txt -
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7004057284/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | extracted standard info from prmon json
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 10:34:00] 2026-02-06 18:33:24,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | WARNING  | wrong length of table data, x=[1770402649.0], y=[2502.0] (must be same and length>=4)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | could have reported an average CPU frequency of 2714 MHz (4 samples)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . Timing measurements:
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . get job = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . initial setup = 33 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . payload setup = 26 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,413 | INFO     | . stage-in = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . payload execution = 49 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . stage-out = 1 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | . log creation = 0 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | ..............................
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:34:00] 2026-02-06 18:33:24,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7004057284/pilotlog.txt
[2026-02-06 10:34:00] [end log extracts]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,695 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,695 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | 
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | job summary report
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | --------------------------------------------------
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | PanDA job id: 7004057284
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | task id: 48317931
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 10:31:14,358 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 10:34:00] 2026-02-06 18:33:24,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | pilot state: failed 
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | transexitcode: 65
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | exeerrorcode: 65
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | exitcode: 65
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | nevents: 0
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | neventsw: 0
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | pid: 3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | pgrp: 3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | corecount: 12
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | event service: False
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | sizes: {0: 2281885, 1: 2283000, 2: 2283000, 12: 2283028, 80: 2306226, 82: 2310518, 85: 2310702, 201: 2310868}
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | --------------------------------------------------
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | 
[2026-02-06 10:34:00] 2026-02-06 18:33:24,866 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 10:34:00] 2026-02-06 18:33:24,925 | INFO     | time since job start (212s) is within the limit (349056.0s)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,980 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,980 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,980 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 10:34:00] 2026-02-06 18:33:24,993 | INFO     | job 7004057284 has completed (purged errors)
[2026-02-06 10:34:00] 2026-02-06 18:33:24,993 | INFO     | overall cleanup function is called
[2026-02-06 10:34:00] 2026-02-06 18:33:25,999 | INFO     | --- collectZombieJob: --- 10, [3814977]
[2026-02-06 10:34:00] 2026-02-06 18:33:26,000 | INFO     | zombie collector waiting for pid 3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:26,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 10:34:00] 2026-02-06 18:33:26,000 | INFO     | collected zombie processes
[2026-02-06 10:34:00] 2026-02-06 18:33:26,000 | INFO     | will attempt to kill all subprocesses of pid=3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:26,807 | INFO     | process IDs to be killed: [3814977] (in reverse order)
[2026-02-06 10:34:00] 2026-02-06 18:33:27,128 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 10:34:00] 2026-02-06 18:33:27,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 10:34:00] 2026-02-06 18:33:27,160 | INFO     | did not find any defunct processes belonging to 3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:27,184 | INFO     | did not find any defunct processes belonging to 3814977
[2026-02-06 10:34:00] 2026-02-06 18:33:27,184 | INFO     | ready for new job
[2026-02-06 10:34:00] 2026-02-06 18:33:27,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 10:34:00] 2026-02-06 18:33:27,197 | INFO     | **************************************
[2026-02-06 10:34:00] 2026-02-06 18:33:27,197 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 10:34:00] 2026-02-06 18:33:27,197 | INFO     | **************************************
[2026-02-06 10:34:00] 2026-02-06 18:33:27,197 | INFO     | 
[2026-02-06 10:34:00] 2026-02-06 18:33:27,199 | INFO     | architecture information:
[2026-02-06 10:34:00] 2026-02-06 18:33:27,207 | INFO     | executing command: cat /etc/os-release
[2026-02-06 10:34:00] 2026-02-06 18:33:27,263 | INFO     | cat /etc/os-release:
[2026-02-06 10:34:00] NAME="CentOS Linux"
[2026-02-06 10:34:00] VERSION="7 (Core)"
[2026-02-06 10:34:00] ID="centos"
[2026-02-06 10:34:00] ID_LIKE="rhel fedora"
[2026-02-06 10:34:00] VERSION_ID="7"
[2026-02-06 10:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 10:34:00] ANSI_COLOR="0;31"
[2026-02-06 10:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 10:34:00] HOME_URL="https://www.centos.org/"
[2026-02-06 10:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 10:34:00] 
[2026-02-06 10:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 10:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 10:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 10:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 10:34:00] 
[2026-02-06 10:34:00] 2026-02-06 18:33:27,263 | INFO     | **************************************
[2026-02-06 10:34:00] 2026-02-06 18:33:27,768 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 10:34:00] 2026-02-06 18:33:27,843 | INFO     | sufficient remaining disk space (2189395230720 B)
[2026-02-06 10:34:00] 2026-02-06 18:33:27,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 10:34:00] 2026-02-06 18:33:27,843 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 10:34:00] 2026-02-06 18:33:27,843 | INFO     | update_server=False
[2026-02-06 10:34:00] 2026-02-06 18:33:27,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 10:34:00] 2026-02-06 18:33:27,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 10:34:00] 2026-02-06 18:33:27,844 | INFO     | aborting loop
[2026-02-06 10:34:00] 2026-02-06 18:33:27,866 | INFO     | all payload control threads have been joined
[2026-02-06 10:34:00] 2026-02-06 18:33:27,866 | INFO     | all data control threads have been joined
[2026-02-06 10:34:00] 2026-02-06 18:33:28,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 10:34:00] 2026-02-06 18:33:28,597 | INFO     | all job control threads have been joined
[2026-02-06 10:34:00] 2026-02-06 18:33:28,849 | INFO     | [job] retrieve thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:28,850 | INFO     | [job] job monitor thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:28,872 | INFO     | [data] control thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:28,872 | INFO     | [payload] control thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:28,979 | INFO     | [payload] failed_post thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:29,026 | INFO     | [payload] validate_post thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:29,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 10:34:00] 2026-02-06 18:33:29,603 | INFO     | [job] control thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:29,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 10:34:00] 2026-02-06 18:33:29,976 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:29,976 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:30,073 | INFO     | [job] validate thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:30,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:30,164 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:30,308 | INFO     | [data] copytool_in thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:30,895 | INFO     | [job] queue monitor thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:31,093 | INFO     | [data] copytool_out thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:32,372 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 10:34:00] 2026-02-06 18:33:51,624 | INFO     | [monitor] cgroup control has ended
[2026-02-06 10:34:00] 2026-02-06 18:33:52,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718917818176)>', '<ExcThread(monitor, started 139718238926592)>']
[2026-02-06 10:34:00] 2026-02-06 18:33:57,675 | INFO     | all workflow threads have been joined
[2026-02-06 10:34:00] 2026-02-06 18:33:57,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 10:34:00] 2026-02-06 18:33:57,675 | INFO     | traces error code: 0
[2026-02-06 10:34:00] 2026-02-06 18:33:57,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 10:34:00] 2026-02-06 18:33:58,782 | INFO     | PID=3809902 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | INFO     | .. there are 42 such processes running
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 10:34:00] 2026-02-06 18:33:58,783 | INFO     | [monitor] control thread has ended
[2026-02-06 10:34:00] 2026-02-06 18:33:59,313 [wrapper] ==== pilot stdout END ====
[2026-02-06 10:34:00] 2026-02-06 18:33:59,380 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 10:34:00] 2026-02-06 18:33:59,399 [wrapper] pilotpid: 3809902
[2026-02-06 10:34:00] 2026-02-06 18:33:59,479 [wrapper] Pilot exit status: 0
[2026-02-06 10:34:00] 2026-02-06 18:33:59,658 [wrapper] pandaids: 7004057284
[2026-02-06 10:34:00] 2026-02-06 18:33:59,887 [wrapper] cleanup supervisor_pilot 3809908 3809903
[2026-02-06 10:34:00] 2026-02-06 18:33:59,907 [wrapper] Test setup, not cleaning
[2026-02-06 10:34:00] 2026-02-06 18:33:59,971 [wrapper] apfmon messages muted
[2026-02-06 10:34:00] 2026-02-06 18:33:59,973 [wrapper] ==== wrapper stdout END ====
[2026-02-06 10:34:00] 2026-02-06 18:33:59,975 [wrapper] ==== wrapper stderr END ====
[2026-02-06 10:34:00]  *** Error codes and diagnostics ***
[2026-02-06 10:34:00]     "exeErrorCode": 65,
[2026-02-06 10:34:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 10:34:00]     "pilotErrorCode": 1305,
[2026-02-06 10:34:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 10:34:00]  *** Listing of results directory ***
[2026-02-06 10:34:00] total 486120
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc    584627 Feb  6 06:32 pilot3.tar.gz
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc      5111 Feb  6 06:32 queuedata.json
[2026-02-06 10:34:00] -rwx------. 1 boinc boinc     36322 Feb  6 06:33 runpilot2-wrapper.sh
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc       100 Feb  6 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 10:34:00] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 10:28 run_atlas
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc       105 Feb  6 10:28 job.xml
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc      6594 Feb  6 10:28 init_data.xml
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc 493640472 Feb  6 10:28 EVNT.48317929._000120.pool.root.1
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc     15845 Feb  6 10:28 start_atlas.sh
[2026-02-06 10:34:00] drwxrwx--x. 2 boinc boinc      4096 Feb  6 10:28 shared
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc    597952 Feb  6 10:28 input.tar.gz
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc         0 Feb  6 10:28 boinc_lockfile
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc      2510 Feb  6 10:28 pandaJob.out
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc   1009512 Feb  6 10:29 agis_schedconf.cvmfs.json
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc   1513088 Feb  6 10:29 agis_ddmendpoints.agis.ALL.json
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc       439 Feb  6 10:29 workernode_map.json
[2026-02-06 10:34:00] drwx------. 5 boinc boinc      4096 Feb  6 10:29 pilot3
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc       973 Feb  6 10:31 memory_monitor_summary.json
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc     21820 Feb  6 10:31 log.48317931._018098.job.log.tgz.1
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc        95 Feb  6 10:33 pilot_heartbeat.json
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc      7017 Feb  6 10:33 heartbeat.json
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc       523 Feb  6 10:33 boinc_task_state.xml
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc        22 Feb  6 10:33 wrapper_checkpoint.txt
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc      8192 Feb  6 10:33 boinc_mmap_file
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc       823 Feb  6 10:33 pilotlog.txt
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc     86830 Feb  6 10:33 log.48317931._018098.job.log.1
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc       188 Feb  6 10:34 output.list
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc       620 Feb  6 10:34 runtime_log
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc    122880 Feb  6 10:34 result.tar.gz
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc       644 Feb  6 10:34 vilNDmQ4b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmD8YKDmMl0lWm.diag
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc      8635 Feb  6 10:34 runtime_log.err
[2026-02-06 10:34:00] -rw-r--r--. 1 boinc boinc     21811 Feb  6 10:34 stderr.txt
[2026-02-06 10:34:00] No HITS result produced
[2026-02-06 10:34:00]  *** Contents of shared directory: ***
[2026-02-06 10:34:00] total 482796
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc 493640472 Feb  6 10:28 ATLAS.root_0
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc     15845 Feb  6 10:28 start_atlas.sh
[2026-02-06 10:34:00] -rw-r--r--. 2 boinc boinc    597952 Feb  6 10:28 input.tar.gz
[2026-02-06 10:34:00] -rw-------. 1 boinc boinc    122880 Feb  6 10:34 result.tar.gz
10:34:02 (3806032): run_atlas exited; CPU time 23.269870
10:34:02 (3806032): called boinc_finish(0)

</stderr_txt>
]]>

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