Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:02 (253996): wrapper (7.7.26015): starting
10:38:02 (253996): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 10:38:03] Arguments: --nthreads 12
[2026-02-06 10:38:03] Threads: 12
[2026-02-06 10:38:03] Checking for CVMFS
[2026-02-06 10:38:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 10:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 10:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 10:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 10:38:04] 2.11.5.0 2492782 97240 226160 155956 2 394 33604424 45568000 24317 130560 0 839300413 99.815 458492802 18208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 10:38:04] CVMFS is ok
[2026-02-06 10:38:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 10:38:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 10:38:04] Further information can be found at the LHC@home message board.
[2026-02-06 10:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 10:38:04] Checking for apptainer binary...
[2026-02-06 10:38:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 10:38:04] Running /usr/bin/apptainer --version
[2026-02-06 10:38:04] apptainer version 1.4.1-1.el9
[2026-02-06 10:38:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 10:38:05] wns0092.triumf.lcg
[2026-02-06 10:38:05] apptainer works
[2026-02-06 10:38:05] Set ATHENA_PROC_NUMBER=12
[2026-02-06 10:38:05] Set ATHENA_CORE_NUMBER=12
[2026-02-06 10:38:05] Starting ATLAS job with PandaID=7003982288
[2026-02-06 10:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 10:42:53]  *** The last 200 lines of the pilot log: ***
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | WARNING  | wrong length of table data, x=[1770403169.0], y=[1586.0] (must be same and length>=4)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . Timing measurements:
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . get job = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . initial setup = 17 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload setup = 20 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-in = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload execution = 54 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-out = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . log creation = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982288/pilotlog.txt
[2026-02-06 10:42:53] 2026-02-06 18:42:05,994 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 10:42:53] - Log from pilotlog.txt -
[2026-02-06 10:42:53] 2026-02-06 18:42:05,927 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7003982288/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | INFO     | extracted standard info from prmon json
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | WARNING  | wrong length of table data, x=[1770403169.0], y=[1586.0] (must be same and length>=4)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . Timing measurements:
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . get job = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . initial setup = 17 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload setup = 20 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-in = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload execution = 54 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-out = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . log creation = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982288/pilotlog.txt
[2026-02-06 10:42:53] 2026-02-06 18:42:05,994 | WARNING  | 
[2026-02-06 10:42:53] [begin log extracts]
[2026-02-06 10:42:53] - Log from pilotlog.txt -
[2026-02-06 10:42:53] 2026-02-06 18:42:05,927 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7003982288/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | INFO     | extracted standard info from prmon json
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 10:42:53] 2026-02-06 18:42:05,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | WARNING  | wrong length of table data, x=[1770403169.0], y=[1586.0] (must be same and length>=4)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | could have reported an average CPU frequency of 2703 MHz (4 samples)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . Timing measurements:
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . get job = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . initial setup = 17 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload setup = 20 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-in = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . payload execution = 54 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . stage-out = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | . log creation = 0 s
[2026-02-06 10:42:53] 2026-02-06 18:42:05,944 | INFO     | ..............................
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 10:42:53] 2026-02-06 18:42:05,945 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7003982288/pilotlog.txt
[2026-02-06 10:42:53] [end log extracts]
[2026-02-06 10:42:53] 2026-02-06 18:42:05,994 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 10:42:53] 2026-02-06 18:42:05,995 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 10:42:53] 2026-02-06 18:42:06,187 | INFO     | time since job start (200s) is within the limit (349056.0s)
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | 
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | job summary report
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | --------------------------------------------------
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | PanDA job id: 7003982288
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | task id: 48317892
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 10:39:58,325 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | pilot state: failed 
[2026-02-06 10:42:53] 2026-02-06 18:42:06,211 | INFO     | transexitcode: 65
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | exeerrorcode: 65
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | exitcode: 65
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | nevents: 0
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | neventsw: 0
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | pid: 263958
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | pgrp: 263958
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | corecount: 12
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | event service: False
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | sizes: {0: 2281897, 1: 2282806, 2: 2283040, 79: 2306294, 80: 2310586, 82: 2310614, 198: 2310936}
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | --------------------------------------------------
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | 
[2026-02-06 10:42:53] 2026-02-06 18:42:06,212 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | job 7003982288 has completed (purged errors)
[2026-02-06 10:42:53] 2026-02-06 18:42:06,337 | INFO     | overall cleanup function is called
[2026-02-06 10:42:53] 2026-02-06 18:42:07,343 | INFO     | --- collectZombieJob: --- 10, [263958]
[2026-02-06 10:42:53] 2026-02-06 18:42:07,343 | INFO     | zombie collector waiting for pid 263958
[2026-02-06 10:42:53] 2026-02-06 18:42:07,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 10:42:53] 2026-02-06 18:42:07,343 | INFO     | collected zombie processes
[2026-02-06 10:42:53] 2026-02-06 18:42:07,343 | INFO     | will attempt to kill all subprocesses of pid=263958
[2026-02-06 10:42:53] 2026-02-06 18:42:07,607 | INFO     | process IDs to be killed: [263958] (in reverse order)
[2026-02-06 10:42:53] 2026-02-06 18:42:07,741 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 10:42:53] 2026-02-06 18:42:07,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 10:42:53] 2026-02-06 18:42:07,805 | INFO     | did not find any defunct processes belonging to 263958
[2026-02-06 10:42:53] 2026-02-06 18:42:07,835 | INFO     | did not find any defunct processes belonging to 263958
[2026-02-06 10:42:53] 2026-02-06 18:42:07,836 | INFO     | ready for new job
[2026-02-06 10:42:53] 2026-02-06 18:42:07,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 10:42:53] 2026-02-06 18:42:07,837 | INFO     | **************************************
[2026-02-06 10:42:53] 2026-02-06 18:42:07,837 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 10:42:53] 2026-02-06 18:42:07,837 | INFO     | **************************************
[2026-02-06 10:42:53] 2026-02-06 18:42:07,837 | INFO     | 
[2026-02-06 10:42:53] 2026-02-06 18:42:07,845 | INFO     | architecture information:
[2026-02-06 10:42:53] 2026-02-06 18:42:07,845 | INFO     | executing command: cat /etc/os-release
[2026-02-06 10:42:53] 2026-02-06 18:42:07,878 | INFO     | cat /etc/os-release:
[2026-02-06 10:42:53] NAME="CentOS Linux"
[2026-02-06 10:42:53] VERSION="7 (Core)"
[2026-02-06 10:42:53] ID="centos"
[2026-02-06 10:42:53] ID_LIKE="rhel fedora"
[2026-02-06 10:42:53] VERSION_ID="7"
[2026-02-06 10:42:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 10:42:53] ANSI_COLOR="0;31"
[2026-02-06 10:42:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 10:42:53] HOME_URL="https://www.centos.org/"
[2026-02-06 10:42:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 10:42:53] 
[2026-02-06 10:42:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 10:42:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 10:42:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 10:42:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 10:42:53] 
[2026-02-06 10:42:53] 2026-02-06 18:42:07,879 | INFO     | **************************************
[2026-02-06 10:42:53] 2026-02-06 18:42:08,382 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 10:42:53] 2026-02-06 18:42:08,404 | INFO     | sufficient remaining disk space (2073459425280 B)
[2026-02-06 10:42:53] 2026-02-06 18:42:08,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 10:42:53] 2026-02-06 18:42:08,405 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 10:42:53] 2026-02-06 18:42:08,405 | INFO     | update_server=False
[2026-02-06 10:42:53] 2026-02-06 18:42:08,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 10:42:53] 2026-02-06 18:42:08,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 10:42:53] 2026-02-06 18:42:08,406 | INFO     | aborting loop
[2026-02-06 10:42:53] 2026-02-06 18:42:08,508 | INFO     | all data control threads have been joined
[2026-02-06 10:42:53] 2026-02-06 18:42:08,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 10:42:53] 2026-02-06 18:42:09,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 10:42:53] 2026-02-06 18:42:09,411 | INFO     | [job] retrieve thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:09,412 | INFO     | [job] job monitor thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:09,430 | INFO     | all job control threads have been joined
[2026-02-06 10:42:53] 2026-02-06 18:42:09,433 | INFO     | [data] copytool_in thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:09,514 | INFO     | [data] control thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:09,724 | INFO     | all payload control threads have been joined
[2026-02-06 10:42:53] 2026-02-06 18:42:09,827 | INFO     | [job] validate thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:09,917 | INFO     | [payload] validate_post thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,340 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,437 | INFO     | [job] control thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,444 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,730 | INFO     | [payload] control thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,741 | INFO     | [payload] failed_post thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:10,848 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:11,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 10:42:53] 2026-02-06 18:42:11,384 | INFO     | [data] copytool_out thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:12,231 | INFO     | [job] queue monitor thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:12,786 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 10:42:53] 2026-02-06 18:42:39,532 | INFO     | PID=257749 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 10:42:53] 2026-02-06 18:42:39,532 | INFO     | .. there are 41 such processes running
[2026-02-06 10:42:53] 2026-02-06 18:42:39,533 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 10:42:53] 2026-02-06 18:42:39,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 10:42:53] 2026-02-06 18:42:39,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 10:42:53] 2026-02-06 18:42:46,221 | INFO     | [monitor] cgroup control has ended
[2026-02-06 10:42:53] 2026-02-06 18:42:47,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529454077760)>', '<ExcThread(monitor, started 140528628782848)>']
[2026-02-06 10:42:53] 2026-02-06 18:42:47,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 10:42:53] 2026-02-06 18:42:47,585 | INFO     | [monitor] control thread has ended
[2026-02-06 10:42:53] 2026-02-06 18:42:52,593 | INFO     | all workflow threads have been joined
[2026-02-06 10:42:53] 2026-02-06 18:42:52,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 10:42:53] 2026-02-06 18:42:52,593 | INFO     | traces error code: 0
[2026-02-06 10:42:53] 2026-02-06 18:42:52,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 10:42:53] 2026-02-06 18:42:53,018 [wrapper] ==== pilot stdout END ====
[2026-02-06 10:42:53] 2026-02-06 18:42:53,052 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 10:42:53] 2026-02-06 18:42:53,066 [wrapper] pilotpid: 257749
[2026-02-06 10:42:53] 2026-02-06 18:42:53,073 [wrapper] Pilot exit status: 0
[2026-02-06 10:42:53] 2026-02-06 18:42:53,114 [wrapper] pandaids: 7003982288
[2026-02-06 10:42:53] 2026-02-06 18:42:53,423 [wrapper] cleanup supervisor_pilot  257755 257750
[2026-02-06 10:42:53] 2026-02-06 18:42:53,447 [wrapper] Test setup, not cleaning
[2026-02-06 10:42:53] 2026-02-06 18:42:53,465 [wrapper] apfmon messages muted
[2026-02-06 10:42:53] 2026-02-06 18:42:53,481 [wrapper] ==== wrapper stdout END ====
[2026-02-06 10:42:53] 2026-02-06 18:42:53,486 [wrapper] ==== wrapper stderr END ====
[2026-02-06 10:42:53]  *** Error codes and diagnostics ***
[2026-02-06 10:42:53]     "exeErrorCode": 65,
[2026-02-06 10:42:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 10:42:53]     "pilotErrorCode": 1305,
[2026-02-06 10:42:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 10:42:53]  *** Listing of results directory ***
[2026-02-06 10:42:53] total 486436
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc    584627 Feb  6 06:32 pilot3.tar.gz
[2026-02-06 10:42:53] -rwx------. 1 boinc boinc     36322 Feb  6 06:32 runpilot2-wrapper.sh
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc      5111 Feb  6 06:32 queuedata.json
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc       100 Feb  6 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 10:42:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 10:38 run_atlas
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc       105 Feb  6 10:38 job.xml
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc      6594 Feb  6 10:38 init_data.xml
[2026-02-06 10:42:53] -rw-r--r--. 2 boinc boinc 493957472 Feb  6 10:38 EVNT.48317889._000200.pool.root.1
[2026-02-06 10:42:53] -rw-r--r--. 2 boinc boinc     15845 Feb  6 10:38 start_atlas.sh
[2026-02-06 10:42:53] drwxrwx--x. 2 boinc boinc      4096 Feb  6 10:38 shared
[2026-02-06 10:42:53] -rw-r--r--. 2 boinc boinc    597952 Feb  6 10:38 input.tar.gz
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc         0 Feb  6 10:38 boinc_lockfile
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc      2521 Feb  6 10:38 pandaJob.out
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc   1009512 Feb  6 10:38 agis_schedconf.cvmfs.json
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc   1513088 Feb  6 10:38 agis_ddmendpoints.agis.ALL.json
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc       445 Feb  6 10:38 workernode_map.json
[2026-02-06 10:42:53] drwx------. 5 boinc boinc      4096 Feb  6 10:38 pilot3
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc       523 Feb  6 10:39 boinc_task_state.xml
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc       952 Feb  6 10:40 memory_monitor_summary.json
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc     21440 Feb  6 10:40 log.48317892._014591.job.log.tgz.1
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc      7038 Feb  6 10:42 heartbeat.json
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc        95 Feb  6 10:42 pilot_heartbeat.json
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc      4818 Feb  6 10:42 pilotlog.txt
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc      8192 Feb  6 10:42 boinc_mmap_file
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc     86088 Feb  6 10:42 log.48317892._014591.job.log.1
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc       188 Feb  6 10:42 output.list
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc       620 Feb  6 10:42 runtime_log
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc    122880 Feb  6 10:42 result.tar.gz
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc      8635 Feb  6 10:42 runtime_log.err
[2026-02-06 10:42:53] -rw-------. 1 boinc boinc       643 Feb  6 10:42 nOBODmD4b88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmt6YKDme2YiWn.diag
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc     21787 Feb  6 10:42 stderr.txt
[2026-02-06 10:42:53] -rw-r--r--. 1 boinc boinc        22 Feb  6 10:42 wrapper_checkpoint.txt
[2026-02-06 10:42:54] No HITS result produced
[2026-02-06 10:42:54]  *** Contents of shared directory: ***
[2026-02-06 10:42:54] total 483108
[2026-02-06 10:42:54] -rw-r--r--. 2 boinc boinc 493957472 Feb  6 10:38 ATLAS.root_0
[2026-02-06 10:42:54] -rw-r--r--. 2 boinc boinc     15845 Feb  6 10:38 start_atlas.sh
[2026-02-06 10:42:54] -rw-r--r--. 2 boinc boinc    597952 Feb  6 10:38 input.tar.gz
[2026-02-06 10:42:54] -rw-------. 1 boinc boinc    122880 Feb  6 10:42 result.tar.gz
10:42:55 (253996): run_atlas exited; CPU time 21.197699
10:42:55 (253996): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN