Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:30:03 (3038603): wrapper (7.7.26015): starting
19:30:03 (3038603): wrapper: running run_atlas (--nthreads 3)
[2026-02-06 19:30:03] Arguments: --nthreads 3
[2026-02-06 19:30:03] Threads: 3
[2026-02-06 19:30:03] Checking for CVMFS
[2026-02-06 19:30:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 19:30:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 19:30:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 19:30:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 19:30:04] 2.9.2.0 2953292 656 60636 155956 1 50 24941147 36864000 0 130560 0 242095 99.973 30263 24928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 19:30:04] CVMFS is ok
[2026-02-06 19:30:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 19:30:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 19:30:04] Further information can be found at the LHC@home message board.
[2026-02-06 19:30:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 19:30:04] Checking for apptainer binary...
[2026-02-06 19:30:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 19:30:04] Running /usr/bin/apptainer --version
[2026-02-06 19:30:04] apptainer version 1.4.1-1.1
[2026-02-06 19:30:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 19:30:04] thA333
[2026-02-06 19:30:04] apptainer works
[2026-02-06 19:30:04] Set ATHENA_PROC_NUMBER=3
[2026-02-06 19:30:04] Set ATHENA_CORE_NUMBER=3
[2026-02-06 19:30:05] Starting ATLAS job with PandaID=6996583587
[2026-02-06 19:30:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 20:51:31]  *** The last 200 lines of the pilot log: ***
[2026-02-06 20:51:31] 2026-02-06 19:50:49,813 | INFO     | [data] copytool_out thread has finished
[2026-02-06 20:51:31] 2026-02-06 19:50:50,177 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 20:51:31] 2026-02-06 19:50:50,587 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 20:51:31] 2026-02-06 19:50:51,095 | WARNING  | process 3047087 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 20:51:31] 2026-02-06 19:50:51,120 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 20:51:31] 2026-02-06 19:50:51,150 | INFO     | number of running child processes to parent process 3047087: 1
[2026-02-06 20:51:31] 2026-02-06 19:50:51,151 | INFO     | maximum number of monitored processes: 6
[2026-02-06 20:51:31] 2026-02-06 19:50:51,151 | INFO     | aborting job monitoring since job object (job id=6996583587) has expired
[2026-02-06 20:51:31] 2026-02-06 19:50:51,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 20:51:31] 2026-02-06 19:50:51,151 | INFO     | will abort loop
[2026-02-06 20:51:31] 2026-02-06 19:50:52,156 | INFO     | [job] job monitor thread has finished
[2026-02-06 20:51:31] 2026-02-06 19:51:17,642 | INFO     | PID=3042652 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 20:51:31] 2026-02-06 19:51:17,643 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 20:51:31] 2026-02-06 19:51:17,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 20:51:31] 2026-02-06 19:51:17,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 20:51:31] 2026-02-06 19:51:26,250 | INFO     | [monitor] cgroup control has ended
[2026-02-06 20:51:31] 2026-02-06 19:51:26,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695460611904)>', '<ExcThread(monitor, started 139694700467968)>']
[2026-02-06 20:51:31] 2026-02-06 19:51:26,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 20:51:31] 2026-02-06 19:51:26,691 | INFO     | [monitor] control thread has ended
[2026-02-06 20:51:31] 2026-02-06 19:51:31,364 | INFO     | all workflow threads have been joined
[2026-02-06 20:51:31] 2026-02-06 19:51:31,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 20:51:31] 2026-02-06 19:51:31,366 | INFO     | traces error code: 0
[2026-02-06 20:51:31] 2026-02-06 19:51:31,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 20:51:31] 2026-02-06 19:51:31,414 [wrapper] ==== pilot stdout END ====
[2026-02-06 20:51:31] 2026-02-06 19:51:31,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 20:51:31] 2026-02-06 19:51:31,419 [wrapper] pilotpid: 3042652
[2026-02-06 20:51:31] 2026-02-06 19:51:31,421 [wrapper] Pilot exit status: 0
[2026-02-06 20:51:31] 2026-02-06 19:51:31,428 [wrapper] pandaids: 6996583587
[2026-02-06 20:51:31] 2026-02-06 19:51:31,444 [wrapper] cleanup supervisor_pilot 3052227 3042653
[2026-02-06 20:51:31] 2026-02-06 19:51:31,446 [wrapper] Test setup, not cleaning
[2026-02-06 20:51:31] 2026-02-06 19:51:31,449 [wrapper] apfmon messages muted
[2026-02-06 20:51:31] 2026-02-06 19:51:31,452 [wrapper] ==== wrapper stdout END ====
[2026-02-06 20:51:31] 2026-02-06 19:51:31,454 [wrapper] ==== wrapper stderr END ====
[2026-02-06 20:51:31]  *** Error codes and diagnostics ***
[2026-02-06 20:51:31]     "exeErrorCode": 0,
[2026-02-06 20:51:31]     "exeErrorDiag": "",
[2026-02-06 20:51:31]     "pilotErrorCode": 0,
[2026-02-06 20:51:31]     "pilotErrorDiag": "",
[2026-02-06 20:51:31]  *** Listing of results directory ***
[2026-02-06 20:51:31] total 656824
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc    584627 Feb  6 10:13 pilot3.tar.gz
[2026-02-06 20:51:31] -rwx------ 1 boinc boinc     36322 Feb  6 10:13 runpilot2-wrapper.sh
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      5111 Feb  6 10:13 queuedata.json
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc       100 Feb  6 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 20:51:31] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 19:30 run_atlas
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc       105 Feb  6 19:30 job.xml
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc 491853320 Feb  6 19:30 EVNT.48310747._000099.pool.root.1
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc    597947 Feb  6 19:30 input.tar.gz
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc     15845 Feb  6 19:30 start_atlas.sh
[2026-02-06 20:51:31] drwxrwx--x 2 boinc boinc      4096 Feb  6 19:30 shared
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc         0 Feb  6 19:30 boinc_setup_complete
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      6197 Feb  6 19:30 init_data.xml
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc         0 Feb  6 19:30 boinc_lockfile
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      2522 Feb  6 19:30 pandaJob.out
[2026-02-06 20:51:31] -rw------- 1 boinc boinc   1009512 Feb  6 19:30 agis_schedconf.cvmfs.json
[2026-02-06 20:51:31] -rw------- 1 boinc boinc   1513088 Feb  6 19:30 agis_ddmendpoints.agis.ALL.json
[2026-02-06 20:51:31] -rw------- 1 boinc boinc       426 Feb  6 19:30 workernode_map.json
[2026-02-06 20:51:31] drwx------ 5 boinc boinc      4096 Feb  6 19:30 pilot3
[2026-02-06 20:51:31] -rw------- 1 boinc boinc 174878823 Feb  6 20:50 HITS.48310749._005034.pool.root.1
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc       530 Feb  6 20:50 boinc_task_state.xml
[2026-02-06 20:51:31] -rw------- 1 boinc boinc        95 Feb  6 20:50 pilot_heartbeat.json
[2026-02-06 20:51:31] -rw------- 1 boinc boinc      1020 Feb  6 20:50 memory_monitor_summary.json
[2026-02-06 20:51:31] -rw------- 1 boinc boinc    251614 Feb  6 20:50 log.48310749._005034.job.log.tgz.1
[2026-02-06 20:51:31] -rw------- 1 boinc boinc      6312 Feb  6 20:50 heartbeat.json
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc        27 Feb  6 20:51 wrapper_checkpoint.txt
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      8192 Feb  6 20:51 boinc_mmap_file
[2026-02-06 20:51:31] -rw------- 1 boinc boinc      5344 Feb  6 20:51 pilotlog.txt
[2026-02-06 20:51:31] -rw------- 1 boinc boinc    709422 Feb  6 20:51 log.48310749._005034.job.log.1
[2026-02-06 20:51:31] -rw------- 1 boinc boinc       357 Feb  6 20:51 output.list
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc       620 Feb  6 20:51 runtime_log
[2026-02-06 20:51:31] -rw------- 1 boinc boinc    983040 Feb  6 20:51 result.tar.gz
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      8896 Feb  6 20:51 runtime_log.err
[2026-02-06 20:51:31] -rw------- 1 boinc boinc       657 Feb  6 20:51 TAgNDmQ5W88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCaYKDmO8Aqhm.diag
[2026-02-06 20:51:31] -rw-r--r-- 1 boinc boinc      5945 Feb  6 20:51 stderr.txt
[2026-02-06 20:51:31] HITS file was successfully produced:
[2026-02-06 20:51:31] -rw------- 1 boinc boinc 174878823 Feb  6 20:50 shared/HITS.pool.root.1
[2026-02-06 20:51:31]  *** Contents of shared directory: ***
[2026-02-06 20:51:31] total 652680
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc 491853320 Feb  6 19:30 ATLAS.root_0
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc    597947 Feb  6 19:30 input.tar.gz
[2026-02-06 20:51:31] -rw-r--r-- 2 boinc boinc     15845 Feb  6 19:30 start_atlas.sh
[2026-02-06 20:51:31] -rw------- 1 boinc boinc 174878823 Feb  6 20:50 HITS.pool.root.1
[2026-02-06 20:51:31] -rw------- 1 boinc boinc    983040 Feb  6 20:51 result.tar.gz
20:51:33 (3038603): run_atlas exited; CPU time 13810.393991
20:51:33 (3038603): called boinc_finish(0)

</stderr_txt>
]]>

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