Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:19 (2739875): wrapper (7.7.26015): starting
13:02:19 (2739875): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 13:02:19] Arguments: --nthreads 8
[2026-02-06 13:02:19] Threads: 8
[2026-02-06 13:02:19] Checking for CVMFS
[2026-02-06 13:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 13:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 13:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 13:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 13:02:20] 2.13.3.0 976897 57534 198700 155955 3 117 28960999 39288832 8529 16776704 0 59147927 99.599 73666236 36338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 13:02:20] CVMFS is ok
[2026-02-06 13:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 13:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 13:02:20] Further information can be found at the LHC@home message board.
[2026-02-06 13:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 13:02:20] Checking for apptainer binary...
[2026-02-06 13:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 13:02:20] Running /usr/bin/apptainer --version
[2026-02-06 13:02:20] apptainer version 1.4.5-2.el9
[2026-02-06 13:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 13:02:21] c-211-17.aglt2.org
[2026-02-06 13:02:21] apptainer works
[2026-02-06 13:02:21] Set ATHENA_PROC_NUMBER=8
[2026-02-06 13:02:21] Set ATHENA_CORE_NUMBER=8
[2026-02-06 13:02:21] Starting ATLAS job with PandaID=6996410713
[2026-02-06 13:02:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 19:01:57]  *** The last 200 lines of the pilot log: ***
[2026-02-06 19:01:57] 2026-02-07 00:00:46,193 | INFO     | job 6996410713 has finished - writing final server update
[2026-02-06 19:01:57] 2026-02-07 00:00:46,197 | INFO     | total number of processed events: 400 (read)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,210 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996410713/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,215 | INFO     | extracted standard info from prmon json
[2026-02-06 19:01:57] 2026-02-07 00:00:46,215 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 19:01:57] 2026-02-07 00:00:46,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 19:01:57] 2026-02-07 00:00:46,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 19:01:57] 2026-02-07 00:00:46,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 19:01:57] 2026-02-07 00:00:46,231 | INFO     | fitting pss+swap vs Time
[2026-02-06 19:01:57] 2026-02-07 00:00:46,232 | INFO     | sum of square deviations: 13409335641.595457
[2026-02-06 19:01:57] 2026-02-07 00:00:46,241 | INFO     | sum of deviations: 52205563103.98006
[2026-02-06 19:01:57] 2026-02-07 00:00:46,241 | INFO     | mean x: 1770411721.6524217
[2026-02-06 19:01:57] 2026-02-07 00:00:46,241 | INFO     | mean y: 2557490.7293447293
[2026-02-06 19:01:57] 2026-02-07 00:00:46,241 | INFO     | intersect: -6890053994.663724
[2026-02-06 19:01:57] 2026-02-07 00:00:46,242 | INFO     | chi2: 2.6369162674931017
[2026-02-06 19:01:57] 2026-02-07 00:00:46,242 | INFO     | sum of square deviations: 12844407044.184952
[2026-02-06 19:01:57] 2026-02-07 00:00:46,250 | INFO     | sum of deviations: 75405540255.23701
[2026-02-06 19:01:57] 2026-02-07 00:00:46,251 | INFO     | mean x: 1770411569.150289
[2026-02-06 19:01:57] 2026-02-07 00:00:46,251 | INFO     | mean y: 2563679.1300578034
[2026-02-06 19:01:57] 2026-02-07 00:00:46,251 | INFO     | intersect: -10390974954.974377
[2026-02-06 19:01:57] 2026-02-07 00:00:46,251 | INFO     | chi2: 1.8634577306135724
[2026-02-06 19:01:57] 2026-02-07 00:00:46,252 | INFO     | current chi2=1.8634577306135724 (change=29.331933911380926 %)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,256 | INFO     | sum of square deviations: 12295592511.472155
[2026-02-06 19:01:57] 2026-02-07 00:00:46,260 | INFO     | sum of deviations: 74194463553.79475
[2026-02-06 19:01:57] 2026-02-07 00:00:46,264 | INFO     | mean x: 1770411416.6510265
[2026-02-06 19:01:57] 2026-02-07 00:00:46,264 | INFO     | mean y: 2563342.586510264
[2026-02-06 19:01:57] 2026-02-07 00:00:46,265 | INFO     | intersect: -10680510710.606035
[2026-02-06 19:01:57] 2026-02-07 00:00:46,265 | INFO     | chi2: 1.863886508313967
[2026-02-06 19:01:57] 2026-02-07 00:00:46,265 | INFO     | current chi2=1.863886508313967 (change=-0.023009789454866827 %)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,265 | INFO     | right removable region: 340
[2026-02-06 19:01:57] 2026-02-07 00:00:46,266 | INFO     | sum of square deviations: 12844352876.936409
[2026-02-06 19:01:57] 2026-02-07 00:00:46,273 | INFO     | sum of deviations: -17016397556.734104
[2026-02-06 19:01:57] 2026-02-07 00:00:46,274 | INFO     | mean x: 1770411874.1618497
[2026-02-06 19:01:57] 2026-02-07 00:00:46,274 | INFO     | mean y: 2576089.959537572
[2026-02-06 19:01:57] 2026-02-07 00:00:46,274 | INFO     | intersect: 2348045151.6197543
[2026-02-06 19:01:57] 2026-02-07 00:00:46,275 | INFO     | chi2: 0.8855570125313346
[2026-02-06 19:01:57] 2026-02-07 00:00:46,275 | INFO     | current chi2=0.8855570125313346 (change=66.41694605747843 %)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,280 | INFO     | sum of square deviations: 12295484543.554241
[2026-02-06 19:01:57] 2026-02-07 00:00:46,283 | INFO     | sum of deviations: -16780903626.923752
[2026-02-06 19:01:57] 2026-02-07 00:00:46,287 | INFO     | mean x: 1770412026.6686218
[2026-02-06 19:01:57] 2026-02-07 00:00:46,287 | INFO     | mean y: 2576004.8856304986
[2026-02-06 19:01:57] 2026-02-07 00:00:46,288 | INFO     | intersect: 2418838128.9389315
[2026-02-06 19:01:57] 2026-02-07 00:00:46,288 | INFO     | chi2: 0.8628183838169974
[2026-02-06 19:01:57] 2026-02-07 00:00:46,288 | INFO     | current chi2=0.8628183838169974 (change=2.5677204733933037 %)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,288 | INFO     | left removable region: 20
[2026-02-06 19:01:57] 2026-02-07 00:00:46,289 | INFO     | sum of square deviations: 10160785017.487423
[2026-02-06 19:01:57] 2026-02-07 00:00:46,296 | INFO     | sum of deviations: 15959513503.681246
[2026-02-06 19:01:57] 2026-02-07 00:00:46,296 | INFO     | mean x: 1770411996.18125
[2026-02-06 19:01:57] 2026-02-07 00:00:46,296 | INFO     | mean y: 2579721.746875
[2026-02-06 19:01:57] 2026-02-07 00:00:46,296 | INFO     | intersect: -2778200908.0475006
[2026-02-06 19:01:57] 2026-02-07 00:00:46,297 | INFO     | chi2: 0.0017328700869078666
[2026-02-06 19:01:57] 2026-02-07 00:00:46,297 | INFO     | current memory leak: 1.57 B/s (using 320 data points, chi2=0.00)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,302 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,302 | INFO     | ..............................
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . Timing measurements:
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . get job = 0 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . initial setup = 19 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . payload setup = 31 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . stage-in = 0 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . payload execution = 21406 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . stage-out = 4 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | . log creation = 0 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,303 | INFO     | ..............................
[2026-02-06 19:01:57] 2026-02-07 00:00:46,609 | INFO     | 
[2026-02-06 19:01:57] 2026-02-07 00:00:46,610 | INFO     | job summary report
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | --------------------------------------------------
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | PanDA job id: 6996410713
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | task id: 48431113
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | errors: (none)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | pilot state: finished 
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | transexitcode: 0
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | exeerrorcode: 0
[2026-02-06 19:01:57] 2026-02-07 00:00:46,611 | INFO     | exeerrordiag: 
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | exitcode: 0
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | exitmsg: OK
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | cpuconsumptiontime: 69676 s
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | nevents: 400
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | neventsw: 0
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | pid: 2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | pgrp: 2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | corecount: 8
[2026-02-06 19:01:57] 2026-02-07 00:00:46,612 | INFO     | event service: False
[2026-02-06 19:01:57] 2026-02-07 00:00:46,613 | INFO     | sizes: {0: 2282027, 1: 2283145, 2: 2283145, 21444: 2317469, 21451: 2326495, 21453: 2326551, 21454: 2326873}
[2026-02-06 19:01:57] 2026-02-07 00:00:46,613 | INFO     | --------------------------------------------------
[2026-02-06 19:01:57] 2026-02-07 00:00:46,613 | INFO     | 
[2026-02-06 19:01:57] 2026-02-07 00:00:46,613 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 19:01:57] 2026-02-07 00:00:46,890 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,892 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 19:01:57] 2026-02-07 00:00:46,893 | INFO     | job 6996410713 has completed (purged errors)
[2026-02-06 19:01:57] 2026-02-07 00:00:46,893 | INFO     | overall cleanup function is called
[2026-02-06 19:01:57] 2026-02-07 00:00:47,813 | INFO     | PID=2743894 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-06 19:01:57] 2026-02-07 00:00:47,813 | INFO     | .. there are 7 such processes running
[2026-02-06 19:01:57] 2026-02-07 00:00:47,906 | INFO     | --- collectZombieJob: --- 10, [2748782]
[2026-02-06 19:01:57] 2026-02-07 00:00:47,906 | INFO     | zombie collector waiting for pid 2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:47,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 19:01:57] 2026-02-07 00:00:47,907 | INFO     | collected zombie processes
[2026-02-06 19:01:57] 2026-02-07 00:00:47,907 | INFO     | will attempt to kill all subprocesses of pid=2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:48,228 | INFO     | process IDs to be killed: [2748782] (in reverse order)
[2026-02-06 19:01:57] 2026-02-07 00:00:48,315 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 19:01:57] 2026-02-07 00:00:48,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 19:01:57] 2026-02-07 00:00:48,328 | INFO     | did not find any defunct processes belonging to 2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:48,343 | INFO     | did not find any defunct processes belonging to 2748782
[2026-02-06 19:01:57] 2026-02-07 00:00:48,343 | INFO     | ready for new job
[2026-02-06 19:01:57] 2026-02-07 00:00:48,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 19:01:57] 2026-02-07 00:00:48,350 | INFO     | **************************************
[2026-02-06 19:01:57] 2026-02-07 00:00:48,351 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 19:01:57] 2026-02-07 00:00:48,351 | INFO     | **************************************
[2026-02-06 19:01:57] 2026-02-07 00:00:48,351 | INFO     | 
[2026-02-06 19:01:57] 2026-02-07 00:00:48,354 | INFO     | architecture information:
[2026-02-06 19:01:57] 2026-02-07 00:00:48,357 | INFO     | executing command: cat /etc/os-release
[2026-02-06 19:01:57] 2026-02-07 00:00:48,430 | INFO     | cat /etc/os-release:
[2026-02-06 19:01:57] NAME="CentOS Linux"
[2026-02-06 19:01:57] VERSION="7 (Core)"
[2026-02-06 19:01:57] ID="centos"
[2026-02-06 19:01:57] ID_LIKE="rhel fedora"
[2026-02-06 19:01:57] VERSION_ID="7"
[2026-02-06 19:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 19:01:57] ANSI_COLOR="0;31"
[2026-02-06 19:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 19:01:57] HOME_URL="https://www.centos.org/"
[2026-02-06 19:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 19:01:57] 
[2026-02-06 19:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 19:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 19:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 19:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 19:01:57] 
[2026-02-06 19:01:57] 2026-02-07 00:00:48,431 | INFO     | **************************************
[2026-02-06 19:01:57] 2026-02-07 00:00:48,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 19:01:57] 2026-02-07 00:00:49,171 | INFO     | sufficient remaining disk space (51176800256 B)
[2026-02-06 19:01:57] 2026-02-07 00:00:49,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 19:01:57] 2026-02-07 00:00:49,171 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 19:01:57] 2026-02-07 00:00:49,171 | INFO     | update_server=False
[2026-02-06 19:01:57] 2026-02-07 00:00:49,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 19:01:57] 2026-02-07 00:00:49,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 19:01:57] 2026-02-07 00:00:49,213 | INFO     | all data control threads have been joined
[2026-02-06 19:01:57] 2026-02-07 00:00:50,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 19:01:57] 2026-02-07 00:00:50,108 | INFO     | aborting loop
[2026-02-06 19:01:57] 2026-02-07 00:00:50,177 | INFO     | [job] retrieve thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:50,219 | INFO     | [data] control thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:50,613 | INFO     | [data] copytool_in thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:50,676 | INFO     | all payload control threads have been joined
[2026-02-06 19:01:57] 2026-02-07 00:00:50,789 | INFO     | all job control threads have been joined
[2026-02-06 19:01:57] 2026-02-07 00:00:51,114 | INFO     | [job] job monitor thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,125 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,141 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,145 | INFO     | [job] validate thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,200 | INFO     | [data] copytool_out thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,413 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,422 | INFO     | [payload] validate_post thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,497 | INFO     | [payload] failed_post thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 19:01:57] 2026-02-07 00:00:51,682 | INFO     | [payload] control thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:51,795 | INFO     | [job] control thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:52,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 19:01:57] 2026-02-07 00:00:52,635 | INFO     | [job] queue monitor thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:00:56,208 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 19:01:57] 2026-02-07 00:01:21,083 | INFO     | PID=2743894 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 19:01:57] 2026-02-07 00:01:21,083 | INFO     | .. there are 7 such processes running
[2026-02-06 19:01:57] 2026-02-07 00:01:21,112 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 19:01:57] 2026-02-07 00:01:21,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 19:01:57] 2026-02-07 00:01:21,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 19:01:57] 2026-02-07 00:01:48,964 | INFO     | [monitor] cgroup control has ended
[2026-02-06 19:01:57] 2026-02-07 00:01:49,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702185760576)>', '<ExcThread(monitor, started 139701839185664)>']
[2026-02-06 19:01:57] 2026-02-07 00:01:49,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 19:01:57] 2026-02-07 00:01:49,280 | INFO     | [monitor] control thread has ended
[2026-02-06 19:01:57] 2026-02-07 00:01:54,071 | INFO     | all workflow threads have been joined
[2026-02-06 19:01:57] 2026-02-07 00:01:54,071 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 19:01:57] 2026-02-07 00:01:54,072 | INFO     | traces error code: 0
[2026-02-06 19:01:57] 2026-02-07 00:01:54,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 19:01:57] 2026-02-07 00:01:55,354 [wrapper] ==== pilot stdout END ====
[2026-02-06 19:01:57] 2026-02-07 00:01:55,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 19:01:57] 2026-02-07 00:01:55,435 [wrapper] pilotpid: 2743894
[2026-02-06 19:01:57] 2026-02-07 00:01:55,509 [wrapper] Pilot exit status: 0
[2026-02-06 19:01:57] 2026-02-07 00:01:55,730 [wrapper] pandaids: 6996410713
[2026-02-06 19:01:57] 2026-02-07 00:01:56,411 [wrapper] cleanup supervisor_pilot 3258629 2743895
[2026-02-06 19:01:57] 2026-02-07 00:01:56,439 [wrapper] Test setup, not cleaning
[2026-02-06 19:01:57] 2026-02-07 00:01:56,505 [wrapper] apfmon messages muted
[2026-02-06 19:01:57] 2026-02-07 00:01:56,559 [wrapper] ==== wrapper stdout END ====
[2026-02-06 19:01:57] 2026-02-07 00:01:56,617 [wrapper] ==== wrapper stderr END ====
[2026-02-06 19:01:57]  *** Error codes and diagnostics ***
[2026-02-06 19:01:57]     "exeErrorCode": 0,
[2026-02-06 19:01:57]     "exeErrorDiag": "",
[2026-02-06 19:01:57]     "pilotErrorCode": 0,
[2026-02-06 19:01:57]     "pilotErrorDiag": "",
[2026-02-06 19:01:57]  *** Listing of results directory ***
[2026-02-06 19:01:57] total 898332
[2026-02-06 19:01:57] -rwx------. 1 boincer umatlas     36322 Feb  6 02:42 runpilot2-wrapper.sh
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 02:44 pilot3.tar.gz
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 02:46 queuedata.json
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas       100 Feb  6 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 19:01:57] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 13:02 run_atlas
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas       105 Feb  6 13:02 job.xml
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas 654468268 Feb  6 13:02 EVNT.48431111._000077.pool.root.1
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 13:02 start_atlas.sh
[2026-02-06 19:01:57] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 13:02 shared
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas    597959 Feb  6 13:02 input.tar.gz
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas         0 Feb  6 13:02 boinc_lockfile
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas      2544 Feb  6 13:02 pandaJob.out
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas        57 Feb  6 13:02 setup.sh.local
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas   1009504 Feb  6 13:02 agis_schedconf.cvmfs.json
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas       441 Feb  6 13:03 workernode_map.json
[2026-02-06 19:01:57] drwx------. 5 boincer umatlas      4096 Feb  6 13:03 pilot3
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas      6660 Feb  6 18:57 init_data.xml
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas 254797914 Feb  6 18:59 HITS.48431113._003810.pool.root.1
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas       531 Feb  6 18:59 boinc_task_state.xml
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas      1052 Feb  6 19:00 memory_monitor_summary.json
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas   1513088 Feb  6 19:00 agis_ddmendpoints.agis.ALL.json
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas    549049 Feb  6 19:00 log.48431113._003810.job.log.tgz.1
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas      6389 Feb  6 19:00 heartbeat.json
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas        95 Feb  6 19:01 pilot_heartbeat.json
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas        28 Feb  6 19:01 wrapper_checkpoint.txt
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas      4819 Feb  6 19:01 pilotlog.txt
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas   2789119 Feb  6 19:01 log.48431113._003810.job.log.1
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas       357 Feb  6 19:01 output.list
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas       620 Feb  6 19:01 runtime_log
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas   3358720 Feb  6 19:01 result.tar.gz
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas      9342 Feb  6 19:01 runtime_log.err
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas       656 Feb  6 19:01 K9OKDmzeV88n9Rq4apOajLDm4fhM0noT9bVooX4SDm28XKDm0SNakm.diag
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 19:01 boinc_mmap_file
[2026-02-06 19:01:57] -rw-r--r--. 1 boincer umatlas     21242 Feb  6 19:01 stderr.txt
[2026-02-06 19:01:57] HITS file was successfully produced:
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas 254797914 Feb  6 18:59 shared/HITS.pool.root.1
[2026-02-06 19:01:57]  *** Contents of shared directory: ***
[2026-02-06 19:01:57] total 891848
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas 654468268 Feb  6 13:02 ATLAS.root_0
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 13:02 start_atlas.sh
[2026-02-06 19:01:57] -rw-r--r--. 2 boincer umatlas    597959 Feb  6 13:02 input.tar.gz
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas 254797914 Feb  6 18:59 HITS.pool.root.1
[2026-02-06 19:01:57] -rw-------. 1 boincer umatlas   3358720 Feb  6 19:01 result.tar.gz
19:02:19 (2739875): run_atlas exited; CPU time 70246.208000
19:02:19 (2739875): called boinc_finish(0)

</stderr_txt>
]]>

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