Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-06 17:00:00 (73880): vboxwrapper version 26210
2026-02-06 17:00:00 (73880): BOINC client version: 8.2.8
2026-02-06 17:00:02 (73880): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-02-06 17:00:02 (73880): Successfully copied 'init_data.xml' to the shared directory.
2026-02-06 17:00:02 (73880): Create VM. (boinc_837669f92e448c71, slot#1)
2026-02-06 17:00:03 (73880): Setting Memory Size for VM. (4600MB)
2026-02-06 17:00:03 (73880): Setting CPU Count for VM. (6)
2026-02-06 17:00:03 (73880): Setting Chipset Options for VM.
2026-02-06 17:00:03 (73880): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-06 17:00:04 (73880): Setting Boot Options for VM.
2026-02-06 17:00:04 (73880): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-06 17:00:05 (73880): Enabling VM Network Access.
2026-02-06 17:00:05 (73880): Disabling USB Support for VM.
2026-02-06 17:00:05 (73880): Disabling COM Port Support for VM.
2026-02-06 17:00:05 (73880): Disabling LPT Port Support for VM.
2026-02-06 17:00:06 (73880): Disabling Audio Support for VM.
2026-02-06 17:00:06 (73880): Disabling Clipboard Support for VM.
2026-02-06 17:00:06 (73880): Disabling Drag and Drop Support for VM.
2026-02-06 17:00:06 (73880): Adding storage controller(s) to VM.
2026-02-06 17:00:07 (73880): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-06 17:00:09 (73880): Adding VirtualBox Guest Additions to VM.
2026-02-06 17:00:09 (73880): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-06 17:00:09 (73880): forwarding host port 60890 to guest port 80
2026-02-06 17:00:09 (73880): Enabling remote desktop for VM.
2026-02-06 17:00:10 (73880): Enabling shared directory for VM.
2026-02-06 17:00:11 (73880): Starting VM using VBoxManage interface. (boinc_837669f92e448c71, slot#1)
2026-02-06 17:00:17 (73880): Successfully started VM. (PID = '80268')
2026-02-06 17:00:17 (73880): Reporting VM Process ID to BOINC.
2026-02-06 17:00:17 (73880): Guest Log: BIOS: VirtualBox 7.0.6
2026-02-06 17:00:17 (73880): Guest Log: CPUID EDX: 0x178bfbff
2026-02-06 17:00:17 (73880): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-06 17:00:17 (73880): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-06 17:00:17 (73880): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-06 17:00:17 (73880): Detected: Web Application Enabled (http://localhost:60890)
2026-02-06 17:00:17 (73880): Detected: Remote Desktop Enabled (localhost:60891)
2026-02-06 17:00:17 (73880): Preference change detected
2026-02-06 17:00:17 (73880): Setting CPU throttle for VM. (50%)
2026-02-06 17:00:17 (73880): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-06 17:00:19 (73880): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-06 17:00:19 (73880): Guest Log: BIOS: Booting from Hard Disk...
2026-02-06 17:00:23 (73880): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-06 17:00:23 (73880): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-06 17:00:23 (73880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-06 17:00:33 (73880): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-06 17:00:33 (73880): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-06 17:00:51 (73880): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000196 main     Log opened 2026-02-06T17:00:49.593672000Z
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000274 main     OS Product: Linux
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000304 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000330 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000355 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000356 main     Process ID: 1340
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.000357 main     Package type: LINUX_64BITS_GENERIC
2026-02-06 17:00:51 (73880): Guest Log: 00:00:00.001942 main     5.2.32 r132073 started. Verbose level = 0
2026-02-06 17:00:51 (73880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-06 17:00:51 (73880): Guest Log: [INFO] Mounting shared directory
2026-02-06 17:00:51 (73880): Guest Log: [INFO] Checking for init_data.xml
2026-02-06 17:00:56 (73880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-06 17:00:56 (73880): Guest Log: [INFO] Detected branch: prod
2026-02-06 17:00:57 (73880): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-06 17:00:57 (73880): Guest Log: Copying input files
2026-02-06 17:01:01 (73880): Guest Log: 00:00:10.003280 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 038 258 000ns (GuestNow=1 770 393 660 558 235 000 ns GuestLast=1 770 397 249 596 493 000 ns fSetTimeLastLoop=true )
2026-02-06 17:01:06 (73880): Guest Log: Copied input files into RunAtlas.
2026-02-06 17:01:06 (73880): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-06 17:01:06 (73880): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-06 17:01:06 (73880): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-06 17:01:06 (73880): Guest Log: Further information can be found at the LHC@home message board.
2026-02-06 17:01:17 (73880): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-06 17:01:18 (73880): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-06 17:01:18 (73880): Guest Log: 2.6.3.0 1618 0 32160 155951 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-06 17:01:20 (73880): Guest Log: copied the webapp to /var/www
2026-02-06 17:01:20 (73880): Guest Log: ATHENA_PROC_NUMBER=6
2026-02-06 17:01:20 (73880): Guest Log: ATHENA_CORE_NUMBER=6
2026-02-06 17:01:20 (73880): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-06 17:01:20 (73880): Guest Log:  *** Starting ATLAS job. (PandaID=6996410707 taskID=48431113) ***
2026-02-06 17:26:36 (73880): VM state change detected. (old = 'running', new = 'paused')
2026-02-06 17:26:52 (73880): VM state change detected. (old = 'paused', new = 'running')
2026-02-06 18:40:43 (73880): Status Report: Elapsed Time: '6000.000000'
2026-02-06 18:40:43 (73880): Status Report: CPU Time: '19745.609375'
2026-02-06 20:20:48 (73880): Status Report: Elapsed Time: '12000.000000'
2026-02-06 20:20:48 (73880): Status Report: CPU Time: '41407.656250'
2026-02-06 20:26:21 (73880): VM state change detected. (old = 'running', new = 'paused')
2026-02-06 20:26:41 (73880): VM state change detected. (old = 'paused', new = 'running')
2026-02-06 22:01:13 (73880): Status Report: Elapsed Time: '18000.000000'
2026-02-06 22:01:13 (73880): Status Report: CPU Time: '62415.171875'
2026-02-06 22:02:12 (73880): Guest Log:  *** Job finished ***
2026-02-06 22:02:12 (73880): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:10,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:10,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:39,236 | INFO     | [monitor] cgroup control has ended
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:39,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361327236928)>', '<ExcThread(monitor, started 140360445576960)>']
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:39,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:39,778 | INFO     | [monitor] control thread has ended
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,294 | INFO     | all workflow threads have been joined
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,294 | INFO     | end of generic workflow (traces error code: 0)
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,294 | INFO     | traces error code: 0
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,484 [wrapper] ==== pilot stdout END ====
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,489 [wrapper] ==== wrapper stdout RESUME ====
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,493 [wrapper] pilotpid: 6019
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,498 [wrapper] Pilot exit status: 0
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,614 [wrapper] pandaids: 6996410707
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,640 [wrapper] cleanup supervisor_pilot 29195 6020
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,647 [wrapper] Test setup, not cleaning
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,653 [wrapper] apfmon messages muted
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,657 [wrapper] ==== wrapper stdout END ====
2026-02-06 22:02:12 (73880): Guest Log: 2026-02-06 21:01:44,661 [wrapper] ==== wrapper stderr END ====
2026-02-06 22:02:12 (73880): Guest Log:  *** Error codes and diagnostics ***
2026-02-06 22:02:12 (73880): Guest Log:     "exeErrorCode": 0,
2026-02-06 22:02:12 (73880): Guest Log:     "exeErrorDiag": "",
2026-02-06 22:02:12 (73880): Guest Log:     "pilotErrorCode": 0,
2026-02-06 22:02:12 (73880): Guest Log:     "pilotErrorDiag": "",
2026-02-06 22:02:12 (73880): Guest Log:  *** Listing of results directory ***
2026-02-06 22:02:13 (73880): Guest Log: total 262524
2026-02-06 22:02:13 (73880): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 07:42 runpilot2-wrapper.sh
2026-02-06 22:02:13 (73880): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 07:44 pilot3.tar.gz
2026-02-06 22:02:13 (73880): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 07:46 queuedata.json
2026-02-06 22:02:13 (73880): Guest Log: -rwxr-xr-x. 1 atlas atlas      8514 Feb  6 16:01 init_data.xml
2026-02-06 22:02:13 (73880): Guest Log: -rwxr-xr-x. 1 atlas atlas    597955 Feb  6 16:01 input.tar.gz
2026-02-06 22:02:13 (73880): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  6 16:01 start_atlas.sh
2026-02-06 22:02:13 (73880): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  6 16:01 EVNT.48431111._000077.pool.root.1 -> /data/./ATLAS.root_0
2026-02-06 22:02:13 (73880): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Feb  6 16:01 pandaJob.out
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas   1009512 Feb  6 16:02 agis_schedconf.cvmfs.json
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas       438 Feb  6 16:02 workernode_map.json
2026-02-06 22:02:13 (73880): Guest Log: drwx------. 5 atlas atlas      4096 Feb  6 16:02 pilot3
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas 259259369 Feb  6 20:59 HITS.48431113._003804.pool.root.1
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas      1034 Feb  6 21:00 memory_monitor_summary.json
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  6 21:00 agis_ddmendpoints.agis.ALL.json
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas    460750 Feb  6 21:00 log.48431113._003804.job.log.tgz.1
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas      6394 Feb  6 21:00 heartbeat.json
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas        95 Feb  6 21:01 pilot_heartbeat.json
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas      4801 Feb  6 21:01 pilotlog.txt
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas   2385963 Feb  6 21:01 log.48431113._003804.job.log.1
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas       357 Feb  6 21:01 output.list
2026-02-06 22:02:13 (73880): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  6 21:01 runtime_log
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas   2867200 Feb  6 21:01 result.tar.gz
2026-02-06 22:02:13 (73880): Guest Log: -rw-r--r--. 1 atlas atlas      8755 Feb  6 21:01 runtime_log.err
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas       660 Feb  6 21:01 ipJKDmzeV88n9Rq4apOajLDm4fhM0noT9bVooX4SDmy8XKDm3xvMdn.diag
2026-02-06 22:02:13 (73880): Guest Log: Looking for outputfile HITS.48431113._003804.pool.root.1
2026-02-06 22:02:13 (73880): Guest Log: HITS file was successfully produced
2026-02-06 22:02:13 (73880): Guest Log: -rw-------. 1 atlas atlas 259259369 Feb  6 20:59 /home/atlas/RunAtlas/HITS.48431113._003804.pool.root.1
2026-02-06 22:02:14 (73880): Guest Log: Successfully finished the ATLAS job!
2026-02-06 22:02:14 (73880): Guest Log: Copying the results back to the shared directory!
2026-02-06 22:02:14 (73880): Guest Log:  *** Contents of shared directory: ***
2026-02-06 22:02:15 (73880): Guest Log: total 895728
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root 654468268 Feb  6 16:00 ATLAS.root_0
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root 259259369 Feb  6  2026 HITS.pool.root.1
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root      8514 Feb  6 16:00 init_data.xml
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root    597955 Feb  6 13:23 input.tar.gz
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root   2867200 Feb  6  2026 result.tar.gz
2026-02-06 22:02:15 (73880): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 13:23 start_atlas.sh
2026-02-06 22:02:15 (73880): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-06 22:02:15 (73880): VM Completion File Detected.
2026-02-06 22:02:15 (73880): Powering off VM.
2026-02-06 22:02:16 (73880): Successfully stopped VM.
2026-02-06 22:02:16 (73880): Deregistering VM. (boinc_837669f92e448c71, slot#1)
2026-02-06 22:02:16 (73880): Removing network bandwidth throttle group from VM.
2026-02-06 22:02:16 (73880): Removing VM from VirtualBox.
2026-02-06 22:02:22 (73880): called boinc_finish(0)

</stderr_txt>
]]>

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