Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:13 (3060115): wrapper (7.7.26015): starting
21:00:13 (3060115): wrapper: running run_atlas (--nthreads 3)
[2026-02-06 21:00:13] Arguments: --nthreads 3
[2026-02-06 21:00:13] Threads: 3
[2026-02-06 21:00:13] Checking for CVMFS
[2026-02-06 21:00:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 21:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 21:00:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 21:00:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 21:00:14] 2.9.2.0 2962440 684 64112 155958 0 50 26720085 36864001 0 130560 0 281197 99.976 31704 15525 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 21:00:14] CVMFS is ok
[2026-02-06 21:00:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 21:00:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 21:00:14] Further information can be found at the LHC@home message board.
[2026-02-06 21:00:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 21:00:14] Checking for apptainer binary...
[2026-02-06 21:00:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 21:00:14] Running /usr/bin/apptainer --version
[2026-02-06 21:00:14] apptainer version 1.4.1-1.1
[2026-02-06 21:00:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 21:00:14] magicA161a
[2026-02-06 21:00:14] apptainer works
[2026-02-06 21:00:14] Set ATHENA_PROC_NUMBER=3
[2026-02-06 21:00:14] Set ATHENA_CORE_NUMBER=3
[2026-02-06 21:00:14] Starting ATLAS job with PandaID=6996409956
[2026-02-06 21:00:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 22:18:36]  *** The last 200 lines of the pilot log: ***
[2026-02-06 22:18:36] 
[2026-02-06 22:18:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 22:18:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 22:18:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 22:18:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 22:18:36] 
[2026-02-06 22:18:36] 2026-02-06 21:17:35,396 | INFO     | **************************************
[2026-02-06 22:18:36] 2026-02-06 21:17:35,511 | WARNING  | process 3068574 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 22:18:36] 2026-02-06 21:17:35,540 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 22:18:36] 2026-02-06 21:17:35,575 | INFO     | number of running child processes to parent process 3068574: 1
[2026-02-06 22:18:36] 2026-02-06 21:17:35,575 | INFO     | maximum number of monitored processes: 6
[2026-02-06 22:18:36] 2026-02-06 21:17:35,575 | INFO     | aborting job monitoring since job object (job id=6996409956) has expired
[2026-02-06 22:18:36] 2026-02-06 21:17:35,899 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | INFO     | sufficient remaining disk space (375251795968 B)
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | INFO     | update_server=False
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 22:18:36] 2026-02-06 21:17:35,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 22:18:36] 2026-02-06 21:17:35,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 22:18:36] 2026-02-06 21:17:35,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 22:18:36] 2026-02-06 21:17:35,913 | INFO     | will abort loop
[2026-02-06 22:18:36] 2026-02-06 21:17:36,074 | INFO     | all data control threads have been joined
[2026-02-06 22:18:36] 2026-02-06 21:17:36,824 | INFO     | all payload control threads have been joined
[2026-02-06 22:18:36] 2026-02-06 21:17:36,916 | INFO     | [job] job monitor thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:36,916 | INFO     | [job] retrieve thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:36,916 | INFO     | [job] queue monitor thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:37,080 | INFO     | [data] control thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:37,329 | INFO     | [payload] validate_post thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:37,597 | INFO     | all job control threads have been joined
[2026-02-06 22:18:36] 2026-02-06 21:17:37,830 | INFO     | [payload] control thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:37,911 | INFO     | [payload] failed_post thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:37,919 | INFO     | [data] copytool_out thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,115 | INFO     | [job] validate thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,216 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,216 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,364 | INFO     | [data] copytool_in thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,405 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:38,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 22:18:36] 2026-02-06 21:17:38,603 | INFO     | [job] control thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:42,598 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:17:46,279 | INFO     | job.realtimelogging is not enabled
[2026-02-06 22:18:36] 2026-02-06 21:17:47,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 22:18:36] 2026-02-06 21:18:06,018 | INFO     | PID=3064154 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 22:18:36] 2026-02-06 21:18:06,018 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 22:18:36] 2026-02-06 21:18:06,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 22:18:36] 2026-02-06 21:18:06,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 22:18:36] 2026-02-06 21:18:31,129 | INFO     | [monitor] cgroup control has ended
[2026-02-06 22:18:36] 2026-02-06 21:18:31,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887352026944)>', '<ExcThread(monitor, started 139886841538304)>']
[2026-02-06 22:18:36] 2026-02-06 21:18:32,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 22:18:36] 2026-02-06 21:18:32,155 | INFO     | [monitor] control thread has ended
[2026-02-06 22:18:36] 2026-02-06 21:18:36,364 | INFO     | all workflow threads have been joined
[2026-02-06 22:18:36] 2026-02-06 21:18:36,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 22:18:36] 2026-02-06 21:18:36,364 | INFO     | traces error code: 0
[2026-02-06 22:18:36] 2026-02-06 21:18:36,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 22:18:36] 2026-02-06 21:18:36,413 [wrapper] ==== pilot stdout END ====
[2026-02-06 22:18:36] 2026-02-06 21:18:36,416 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 22:18:36] 2026-02-06 21:18:36,418 [wrapper] pilotpid: 3064154
[2026-02-06 22:18:36] 2026-02-06 21:18:36,420 [wrapper] Pilot exit status: 0
[2026-02-06 22:18:36] 2026-02-06 21:18:36,427 [wrapper] pandaids: 6996409956
[2026-02-06 22:18:36] 2026-02-06 21:18:36,443 [wrapper] cleanup supervisor_pilot 3073755 3064155
[2026-02-06 22:18:36] 2026-02-06 21:18:36,446 [wrapper] Test setup, not cleaning
[2026-02-06 22:18:36] 2026-02-06 21:18:36,448 [wrapper] apfmon messages muted
[2026-02-06 22:18:36] 2026-02-06 21:18:36,450 [wrapper] ==== wrapper stdout END ====
[2026-02-06 22:18:36] 2026-02-06 21:18:36,452 [wrapper] ==== wrapper stderr END ====
[2026-02-06 22:18:36]  *** Error codes and diagnostics ***
[2026-02-06 22:18:36]     "exeErrorCode": 0,
[2026-02-06 22:18:36]     "exeErrorDiag": "",
[2026-02-06 22:18:36]     "pilotErrorCode": 0,
[2026-02-06 22:18:36]     "pilotErrorDiag": "",
[2026-02-06 22:18:36]  *** Listing of results directory ***
[2026-02-06 22:18:36] total 675172
[2026-02-06 22:18:36] -rwx------ 1 boinc boinc     36322 Feb  6 08:40 runpilot2-wrapper.sh
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc    584627 Feb  6 08:42 pilot3.tar.gz
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      5111 Feb  6 08:42 queuedata.json
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc       100 Feb  6 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 22:18:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 21:00 run_atlas
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc       105 Feb  6 21:00 job.xml
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc 503045096 Feb  6 21:00 EVNT.48442027._000041.pool.root.1
[2026-02-06 22:18:36] drwxrwx--x 2 boinc boinc      4096 Feb  6 21:00 shared
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc    597952 Feb  6 21:00 input.tar.gz
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc     15845 Feb  6 21:00 start_atlas.sh
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc         0 Feb  6 21:00 boinc_setup_complete
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      6448 Feb  6 21:00 init_data.xml
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc         0 Feb  6 21:00 boinc_lockfile
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      2528 Feb  6 21:00 pandaJob.out
[2026-02-06 22:18:36] -rw------- 1 boinc boinc   1009512 Feb  6 21:00 agis_schedconf.cvmfs.json
[2026-02-06 22:18:36] -rw------- 1 boinc boinc   1513088 Feb  6 21:00 agis_ddmendpoints.agis.ALL.json
[2026-02-06 22:18:36] -rw------- 1 boinc boinc       426 Feb  6 21:00 workernode_map.json
[2026-02-06 22:18:36] drwx------ 5 boinc boinc      4096 Feb  6 21:00 pilot3
[2026-02-06 22:18:36] -rw------- 1 boinc boinc 182467265 Feb  6 22:17 HITS.48442031._002047.pool.root.1
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc       530 Feb  6 22:17 boinc_task_state.xml
[2026-02-06 22:18:36] -rw------- 1 boinc boinc      1015 Feb  6 22:17 memory_monitor_summary.json
[2026-02-06 22:18:36] -rw------- 1 boinc boinc    288098 Feb  6 22:17 log.48442031._002047.job.log.tgz.1
[2026-02-06 22:18:36] -rw------- 1 boinc boinc      6307 Feb  6 22:17 heartbeat.json
[2026-02-06 22:18:36] -rw------- 1 boinc boinc        95 Feb  6 22:18 pilot_heartbeat.json
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc        27 Feb  6 22:18 wrapper_checkpoint.txt
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      8192 Feb  6 22:18 boinc_mmap_file
[2026-02-06 22:18:36] -rw------- 1 boinc boinc      5344 Feb  6 22:18 pilotlog.txt
[2026-02-06 22:18:36] -rw------- 1 boinc boinc    682026 Feb  6 22:18 log.48442031._002047.job.log.1
[2026-02-06 22:18:36] -rw------- 1 boinc boinc       357 Feb  6 22:18 output.list
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc       620 Feb  6 22:18 runtime_log
[2026-02-06 22:18:36] -rw------- 1 boinc boinc    983040 Feb  6 22:18 result.tar.gz
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      8916 Feb  6 22:18 runtime_log.err
[2026-02-06 22:18:36] -rw------- 1 boinc boinc       661 Feb  6 22:18 511KDmwcV88n9Rq4apOajLDm4fhM0noT9bVooX4SDmt2XKDmFSWeJo.diag
[2026-02-06 22:18:36] -rw-r--r-- 1 boinc boinc      8963 Feb  6 22:18 stderr.txt
[2026-02-06 22:18:36] HITS file was successfully produced:
[2026-02-06 22:18:36] -rw------- 1 boinc boinc 182467265 Feb  6 22:17 shared/HITS.pool.root.1
[2026-02-06 22:18:36]  *** Contents of shared directory: ***
[2026-02-06 22:18:36] total 671016
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc 503045096 Feb  6 21:00 ATLAS.root_0
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc    597952 Feb  6 21:00 input.tar.gz
[2026-02-06 22:18:36] -rw-r--r-- 2 boinc boinc     15845 Feb  6 21:00 start_atlas.sh
[2026-02-06 22:18:36] -rw------- 1 boinc boinc 182467265 Feb  6 22:17 HITS.pool.root.1
[2026-02-06 22:18:36] -rw------- 1 boinc boinc    983040 Feb  6 22:18 result.tar.gz
22:18:38 (3060115): run_atlas exited; CPU time 13217.534614
22:18:38 (3060115): called boinc_finish(0)

</stderr_txt>
]]>

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