Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
17:41:41 (2020662): wrapper (7.7.26015): starting
17:41:41 (2020662): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 17:41:41] Arguments: --nthreads 4
[2026-02-07 17:41:41] Threads: 4
[2026-02-07 17:41:41] Checking for CVMFS
[2026-02-07 17:41:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 17:41:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 17:41:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 17:41:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 17:41:41] 2.13.3.0 12357 2275 47268 155988 2 50 24106674 33554432 0 130560 0 1494796 99.988 95274 226 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-07 17:41:41] CVMFS is ok
[2026-02-07 17:41:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 17:41:41] Checking for apptainer binary...
[2026-02-07 17:41:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 17:41:41] Running /usr/bin/apptainer --version
[2026-02-07 17:41:41] apptainer version 1.4.5
[2026-02-07 17:41:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 17:41:41] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-07 17:41:41] apptainer works
[2026-02-07 17:41:41] Set ATHENA_PROC_NUMBER=4
[2026-02-07 17:41:41] Set ATHENA_CORE_NUMBER=4
[2026-02-07 17:41:41] Starting ATLAS job with PandaID=6996410677
[2026-02-07 17:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 18:58:01]  *** The last 200 lines of the pilot log: ***
[2026-02-07 18:58:01]  ddmendpoint_alt=None
[2026-02-07 18:58:01]  direct_access_lan=False
[2026-02-07 18:58:01]  direct_access_wan=False
[2026-02-07 18:58:01]  domain=
[2026-02-07 18:58:01]  filesize=277167
[2026-02-07 18:58:01]  filetype=log
[2026-02-07 18:58:01]  guid=75ac4732-0e82-423c-af01-cd0c12d86d67
[2026-02-07 18:58:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 18:58:01]  is_altstaged=None
[2026-02-07 18:58:01]  is_tar=False
[2026-02-07 18:58:01]  lfn=log.48431113._003774.job.log.tgz.1
[2026-02-07 18:58:01]  mtime=0
[2026-02-07 18:58:01]  protocol_id=None
[2026-02-07 18:58:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 18:58:01]  replicas=None
[2026-02-07 18:58:01]  scope=mc23_13p6TeV
[2026-02-07 18:58:01]  status=None
[2026-02-07 18:58:01]  status_code=0
[2026-02-07 18:58:01]  storage_token=
[2026-02-07 18:58:01]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-6996410677/log.48431113._003774.job.log.tgz.1
[2026-02-07 18:58:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/01/log.48431113._003774.job.log.tgz.1
[2026-02-07 18:58:01]  workdir=None
[2026-02-07 18:58:01] ]
[2026-02-07 18:58:01] 2026-02-07 16:57:14,581 | INFO     | transferring file log.48431113._003774.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-6996410677/log.48431113._003774.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-07 18:58:01] 2026-02-07 16:57:14,581 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-6996410677/log.48431113._003774.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48431113._003774.job
[2026-02-07 18:58:01] 2026-02-07 16:57:14,590 | INFO     | adding to output.list: log.48431113._003774.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/01/log.48431113._003774.job.log.tg
[2026-02-07 18:58:01] 2026-02-07 16:57:14,591 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 18:58:01] 2026-02-07 16:57:14,591 | INFO     | summary of transferred files:
[2026-02-07 18:58:01] 2026-02-07 16:57:14,591 | INFO     |  -- lfn=log.48431113._003774.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 18:58:01] 2026-02-07 16:57:14,591 | INFO     | stage-out finished correctly
[2026-02-07 18:58:01] 2026-02-07 16:57:15,618 | INFO     | time since job start (4527s) is within the limit (349056.0s)
[2026-02-07 18:58:01] 2026-02-07 16:57:15,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 18:58:01] 2026-02-07 16:57:16,004 | INFO     | job 6996410677 has state=finished
[2026-02-07 18:58:01] 2026-02-07 16:57:16,004 | INFO     | preparing for final server update for job 6996410677 in state='finished'
[2026-02-07 18:58:01] 2026-02-07 16:57:16,005 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-6996410677/jobReport.json
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | this job has now completed (state=finished)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | log transfer has been attempted: DONE
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | job 6996410677 has finished - writing final server update
[2026-02-07 18:58:01] 2026-02-07 16:57:16,006 | INFO     | total number of processed events: 400 (read)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-6996410677/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | INFO     | extracted standard info from prmon json
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 18:58:01] 2026-02-07 16:57:16,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | fitting pss+swap vs Time
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | sum of square deviations: 93240818.0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | sum of deviations: -13182363641.999998
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | mean x: 1770481242.0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | mean y: 2556468.447761194
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | intersect: 250312753804.8096
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | chi2: 0.1290274273464704
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | current memory leak: -141.38 B/s (using 67 data points, chi2=0.13)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | could have reported an average CPU frequency of 3211 MHz (6 samples)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | ..............................
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . Timing measurements:
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . get job = 0 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . initial setup = 3 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . payload setup = 2 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . stage-in = 0 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . payload execution = 4509 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . stage-out = 0 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | . log creation = 0 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,009 | INFO     | ..............................
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | 
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | job summary report
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | --------------------------------------------------
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | PanDA job id: 6996410677
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | task id: 48431113
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | errors: (none)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | pilot state: finished 
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | transexitcode: 0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | exeerrorcode: 0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | exeerrordiag: 
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | exitcode: 0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,035 | INFO     | exitmsg: OK
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | cpuconsumptiontime: 17351 s
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | nevents: 400
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | neventsw: 0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | pid: 2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | pgrp: 2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | corecount: 4
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | event service: False
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | sizes: {0: 2282855, 1: 2283145, 11: 2283145, 4515: 2318409, 4516: 2318409, 4517: 2318603}
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | --------------------------------------------------
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | 
[2026-02-07 18:58:01] 2026-02-07 16:57:16,036 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | job 6996410677 has completed (purged errors)
[2026-02-07 18:58:01] 2026-02-07 16:57:16,045 | INFO     | overall cleanup function is called
[2026-02-07 18:58:01] 2026-02-07 16:57:17,051 | INFO     | --- collectZombieJob: --- 10, [2029298]
[2026-02-07 18:58:01] 2026-02-07 16:57:17,051 | INFO     | zombie collector waiting for pid 2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:17,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 18:58:01] 2026-02-07 16:57:17,051 | INFO     | collected zombie processes
[2026-02-07 18:58:01] 2026-02-07 16:57:17,051 | INFO     | will attempt to kill all subprocesses of pid=2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:17,138 | INFO     | process IDs to be killed: [2029298] (in reverse order)
[2026-02-07 18:58:01] 2026-02-07 16:57:17,167 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 18:58:01] 2026-02-07 16:57:17,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 18:58:01] 2026-02-07 16:57:17,169 | INFO     | did not find any defunct processes belonging to 2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | did not find any defunct processes belonging to 2029298
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | ready for new job
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | **************************************
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 18:58:01] 2026-02-07 16:57:17,172 | INFO     | **************************************
[2026-02-07 18:58:01] 2026-02-07 16:57:17,173 | INFO     | 
[2026-02-07 18:58:01] 2026-02-07 16:57:17,173 | INFO     | architecture information:
[2026-02-07 18:58:01] 2026-02-07 16:57:17,173 | INFO     | executing command: cat /etc/os-release
[2026-02-07 18:58:01] 2026-02-07 16:57:17,179 | INFO     | cat /etc/os-release:
[2026-02-07 18:58:01] NAME="CentOS Linux"
[2026-02-07 18:58:01] VERSION="7 (Core)"
[2026-02-07 18:58:01] ID="centos"
[2026-02-07 18:58:01] ID_LIKE="rhel fedora"
[2026-02-07 18:58:01] VERSION_ID="7"
[2026-02-07 18:58:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 18:58:01] ANSI_COLOR="0;31"
[2026-02-07 18:58:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 18:58:01] HOME_URL="https://www.centos.org/"
[2026-02-07 18:58:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 18:58:01] 
[2026-02-07 18:58:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 18:58:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 18:58:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 18:58:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 18:58:01] 
[2026-02-07 18:58:01] 2026-02-07 16:57:17,179 | INFO     | **************************************
[2026-02-07 18:58:01] 2026-02-07 16:57:17,682 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | INFO     | sufficient remaining disk space (64575504384 B)
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | INFO     | update_server=False
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:58:01] 2026-02-07 16:57:17,688 | INFO     | aborting loop
[2026-02-07 18:58:01] 2026-02-07 16:57:17,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 18:58:01] 2026-02-07 16:57:17,822 | INFO     | all job control threads have been joined
[2026-02-07 18:58:01] 2026-02-07 16:57:18,361 | INFO     | all payload control threads have been joined
[2026-02-07 18:58:01] 2026-02-07 16:57:18,556 | INFO     | all data control threads have been joined
[2026-02-07 18:58:01] 2026-02-07 16:57:18,693 | INFO     | [job] retrieve thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:18,693 | INFO     | [job] queue monitor thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:18,694 | INFO     | [job] job monitor thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:18,828 | INFO     | [job] control thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:18,931 | INFO     | [payload] failed_post thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,201 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,343 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,362 | INFO     | [payload] control thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,412 | INFO     | [data] copytool_in thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,528 | INFO     | [job] validate thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,561 | INFO     | [data] control thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,694 | INFO     | [data] copytool_out thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,819 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:19,951 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:20,145 | INFO     | [payload] validate_post thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:21,694 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 18:58:01] 2026-02-07 16:57:48,787 | INFO     | PID=2024497 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 18:58:01] 2026-02-07 16:57:48,788 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 18:58:01] 2026-02-07 16:57:48,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 18:58:01] 2026-02-07 16:57:48,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 18:58:01] 2026-02-07 16:57:54,546 | INFO     | [monitor] cgroup control has ended
[2026-02-07 18:58:01] 2026-02-07 16:57:55,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051370575680)>', '<ExcThread(monitor, started 140050738169600)>']
[2026-02-07 18:58:01] 2026-02-07 16:57:56,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 18:58:01] 2026-02-07 16:57:56,827 | INFO     | [monitor] control thread has ended
[2026-02-07 18:58:01] 2026-02-07 16:58:00,995 | INFO     | all workflow threads have been joined
[2026-02-07 18:58:01] 2026-02-07 16:58:00,995 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 18:58:01] 2026-02-07 16:58:00,995 | INFO     | traces error code: 0
[2026-02-07 18:58:01] 2026-02-07 16:58:00,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 18:58:01] 2026-02-07 16:58:01,034 [wrapper] ==== pilot stdout END ====
[2026-02-07 18:58:01] 2026-02-07 16:58:01,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 18:58:01] 2026-02-07 16:58:01,037 [wrapper] pilotpid: 2024497
[2026-02-07 18:58:01] 2026-02-07 16:58:01,038 [wrapper] Pilot exit status: 0
[2026-02-07 18:58:01] 2026-02-07 16:58:01,043 [wrapper] pandaids: 6996410677
[2026-02-07 18:58:01] 2026-02-07 16:58:01,062 [wrapper] cleanup supervisor_pilot 2083021 2024498
[2026-02-07 18:58:01] 2026-02-07 16:58:01,064 [wrapper] Test setup, not cleaning
[2026-02-07 18:58:01] 2026-02-07 16:58:01,065 [wrapper] apfmon messages muted
[2026-02-07 18:58:01] 2026-02-07 16:58:01,067 [wrapper] ==== wrapper stdout END ====
[2026-02-07 18:58:01] 2026-02-07 16:58:01,068 [wrapper] ==== wrapper stderr END ====
[2026-02-07 18:58:01]  *** Error codes and diagnostics ***
[2026-02-07 18:58:01]     "exeErrorCode": 0,
[2026-02-07 18:58:01]     "exeErrorDiag": "",
[2026-02-07 18:58:01]     "pilotErrorCode": 0,
[2026-02-07 18:58:01]     "pilotErrorDiag": "",
[2026-02-07 18:58:01]  *** Listing of results directory ***
[2026-02-07 18:58:01] total 878728
[2026-02-07 18:58:01] -rw-r--r-- 1 ek ek    584627 Feb  6 09:38 pilot3.tar.gz
[2026-02-07 18:58:01] -rwx------ 1 ek ek     36322 Feb  6 09:39 runpilot2-wrapper.sh
[2026-02-07 18:58:01] -rw-r--r-- 1 ek ek      5111 Feb  6 09:41 queuedata.json
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek       100 Feb  7 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 18:58:01] -rwxr-xr-x 1 ek ek      7986 Feb  7 17:41 run_atlas
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek       105 Feb  7 17:41 job.xml
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek 644202219 Feb  7 17:41 EVNT.48431111._000076.pool.root.1
[2026-02-07 18:58:01] drwxrwx--x 2 ek ek      4096 Feb  7 17:41 shared
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek    597953 Feb  7 17:41 input.tar.gz
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek     15845 Feb  7 17:41 start_atlas.sh
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek         0 Feb  7 17:41 boinc_setup_complete
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek      9841 Feb  7 17:41 init_data.xml
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek         0 Feb  7 17:41 boinc_lockfile
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek      2544 Feb  7 17:41 pandaJob.out
[2026-02-07 18:58:01] -rw------- 1 ek ek        50 Feb  7 17:41 setup.sh.local
[2026-02-07 18:58:01] -rw------- 1 ek ek   1009502 Feb  7 17:41 agis_schedconf.cvmfs.json
[2026-02-07 18:58:01] -rw------- 1 ek ek   1513088 Feb  7 17:41 agis_ddmendpoints.agis.ALL.json
[2026-02-07 18:58:01] -rw------- 1 ek ek       432 Feb  7 17:41 workernode_map.json
[2026-02-07 18:58:01] drwx------ 5 ek ek      4096 Feb  7 17:41 pilot3
[2026-02-07 18:58:01] -rw------- 1 ek ek 249781137 Feb  7 18:56 HITS.48431113._003774.pool.root.1
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek       530 Feb  7 18:56 boinc_task_state.xml
[2026-02-07 18:58:01] -rw------- 1 ek ek      1022 Feb  7 18:57 memory_monitor_summary.json
[2026-02-07 18:58:01] -rw------- 1 ek ek    277167 Feb  7 18:57 log.48431113._003774.job.log.tgz.1
[2026-02-07 18:58:01] -rw------- 1 ek ek      6320 Feb  7 18:57 heartbeat.json
[2026-02-07 18:58:01] -rw------- 1 ek ek        95 Feb  7 18:57 pilot_heartbeat.json
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek      8192 Feb  7 18:57 boinc_mmap_file
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek        27 Feb  7 18:57 wrapper_checkpoint.txt
[2026-02-07 18:58:01] -rw------- 1 ek ek      4744 Feb  7 18:58 pilotlog.txt
[2026-02-07 18:58:01] -rw------- 1 ek ek    666283 Feb  7 18:58 log.48431113._003774.job.log.1
[2026-02-07 18:58:01] -rw------- 1 ek ek       357 Feb  7 18:58 output.list
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek       620 Feb  7 18:58 runtime_log
[2026-02-07 18:58:01] -rw------- 1 ek ek    962560 Feb  7 18:58 result.tar.gz
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek      9501 Feb  7 18:58 runtime_log.err
[2026-02-07 18:58:01] -rw------- 1 ek ek       660 Feb  7 18:58 dKFNDmjcV88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxPYKDm6ctgwm.diag
[2026-02-07 18:58:01] -rw-rw-r-- 1 ek ek     20733 Feb  7 18:58 stderr.txt
[2026-02-07 18:58:01] HITS file was successfully produced:
[2026-02-07 18:58:01] -rw------- 1 ek ek 249781137 Feb  7 18:56 shared/HITS.pool.root.1
[2026-02-07 18:58:01]  *** Contents of shared directory: ***
[2026-02-07 18:58:01] total 874580
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek 644202219 Feb  7 17:41 ATLAS.root_0
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek    597953 Feb  7 17:41 input.tar.gz
[2026-02-07 18:58:01] -rw-r--r-- 2 ek ek     15845 Feb  7 17:41 start_atlas.sh
[2026-02-07 18:58:01] -rw------- 1 ek ek 249781137 Feb  7 18:56 HITS.pool.root.1
[2026-02-07 18:58:01] -rw------- 1 ek ek    962560 Feb  7 18:58 result.tar.gz
18:58:02 (2020662): run_atlas exited; CPU time 17390.448414
18:58:02 (2020662): called boinc_finish(0)

</stderr_txt>
]]>

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