Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:03:52 (17135): wrapper (7.7.26015): starting
05:03:52 (17135): wrapper: running run_atlas (--nthreads 11)
[2026-02-06 05:03:52] Arguments: --nthreads 11
[2026-02-06 05:03:52] Threads: 11
[2026-02-06 05:03:52] Checking for CVMFS
[2026-02-06 05:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 05:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 05:03:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 05:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 05:03:52] 2.13.3.0 6723 63084 243560 155936 3 325 24961539 40960000 9118 16776704 0 50198999 99.630 52750943 40950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 05:03:52] CVMFS is ok
[2026-02-06 05:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 05:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 05:03:52] Further information can be found at the LHC@home message board.
[2026-02-06 05:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 05:03:52] Checking for apptainer binary...
[2026-02-06 05:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 05:03:52] Running /usr/bin/apptainer --version
[2026-02-06 05:03:52] apptainer version 1.4.5-2.el9
[2026-02-06 05:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 05:03:52] c-210-35-2.aglt2.org
[2026-02-06 05:03:52] apptainer works
[2026-02-06 05:03:52] Set ATHENA_PROC_NUMBER=11
[2026-02-06 05:03:52] Set ATHENA_CORE_NUMBER=11
[2026-02-06 05:03:52] Starting ATLAS job with PandaID=7000905348
[2026-02-06 05:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 08:33:59]  *** The last 200 lines of the pilot log: ***
[2026-02-06 08:33:59] 2026-02-06 13:33:20,822 | INFO     | total number of processed events: 400 (read)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,860 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7000905348/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,861 | INFO     | extracted standard info from prmon json
[2026-02-06 08:33:59] 2026-02-06 13:33:20,861 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 08:33:59] 2026-02-06 13:33:20,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 08:33:59] 2026-02-06 13:33:20,876 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 08:33:59] 2026-02-06 13:33:20,876 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 08:33:59] 2026-02-06 13:33:20,879 | INFO     | fitting pss+swap vs Time
[2026-02-06 08:33:59] 2026-02-06 13:33:20,888 | INFO     | sum of square deviations: 2710700146.8786397
[2026-02-06 08:33:59] 2026-02-06 13:33:20,891 | INFO     | sum of deviations: 8269242369.548561
[2026-02-06 08:33:59] 2026-02-06 13:33:20,891 | INFO     | mean x: 1770378518.0242717
[2026-02-06 08:33:59] 2026-02-06 13:33:20,891 | INFO     | mean y: 2626593.490291262
[2026-02-06 08:33:59] 2026-02-06 13:33:20,892 | INFO     | intersect: -5398077378.965844
[2026-02-06 08:33:59] 2026-02-06 13:33:20,892 | INFO     | chi2: 1.9615969504066668
[2026-02-06 08:33:59] 2026-02-06 13:33:20,892 | INFO     | sum of square deviations: 2518042888.218909
[2026-02-06 08:33:59] 2026-02-06 13:33:20,893 | INFO     | sum of deviations: 21493779182.61692
[2026-02-06 08:33:59] 2026-02-06 13:33:20,893 | INFO     | mean x: 1770378365.5124378
[2026-02-06 08:33:59] 2026-02-06 13:33:20,893 | INFO     | mean y: 2636851.353233831
[2026-02-06 08:33:59] 2026-02-06 13:33:20,893 | INFO     | intersect: -15109147715.95494
[2026-02-06 08:33:59] 2026-02-06 13:33:20,894 | INFO     | chi2: 1.2617361733576524
[2026-02-06 08:33:59] 2026-02-06 13:33:20,894 | INFO     | current chi2=1.2617361733576524 (change=35.678113024386754 %)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,894 | INFO     | sum of square deviations: 2334771680.954091
[2026-02-06 08:33:59] 2026-02-06 13:33:20,906 | INFO     | sum of deviations: 20881956288.41838
[2026-02-06 08:33:59] 2026-02-06 13:33:20,906 | INFO     | mean x: 1770378213.0153062
[2026-02-06 08:33:59] 2026-02-06 13:33:20,906 | INFO     | mean y: 2636342.1938775512
[2026-02-06 08:33:59] 2026-02-06 13:33:20,907 | INFO     | intersect: -15831443178.184196
[2026-02-06 08:33:59] 2026-02-06 13:33:20,907 | INFO     | chi2: 1.2624969932849044
[2026-02-06 08:33:59] 2026-02-06 13:33:20,907 | INFO     | current chi2=1.2624969932849044 (change=-0.06029944637533216 %)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,907 | INFO     | right removable region: 195
[2026-02-06 08:33:59] 2026-02-06 13:33:20,907 | INFO     | sum of square deviations: 2518040337.9701586
[2026-02-06 08:33:59] 2026-02-06 13:33:20,908 | INFO     | sum of deviations: -19550252962.58209
[2026-02-06 08:33:59] 2026-02-06 13:33:20,908 | INFO     | mean x: 1770378670.5373135
[2026-02-06 08:33:59] 2026-02-06 13:33:20,909 | INFO     | mean y: 2648328.144278607
[2026-02-06 08:33:59] 2026-02-06 13:33:20,909 | INFO     | intersect: 13748000349.178675
[2026-02-06 08:33:59] 2026-02-06 13:33:20,909 | INFO     | chi2: 0.7434540794993639
[2026-02-06 08:33:59] 2026-02-06 13:33:20,909 | INFO     | current chi2=0.7434540794993639 (change=62.09954958661436 %)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,909 | INFO     | sum of square deviations: 2334729541.4897914
[2026-02-06 08:33:59] 2026-02-06 13:33:20,910 | INFO     | sum of deviations: -17076002396.510202
[2026-02-06 08:33:59] 2026-02-06 13:33:20,910 | INFO     | mean x: 1770378823.0510204
[2026-02-06 08:33:59] 2026-02-06 13:33:20,910 | INFO     | mean y: 2646265.051020408
[2026-02-06 08:33:59] 2026-02-06 13:33:20,911 | INFO     | intersect: 12951038139.96589
[2026-02-06 08:33:59] 2026-02-06 13:33:20,918 | INFO     | chi2: 0.7415035897448353
[2026-02-06 08:33:59] 2026-02-06 13:33:20,919 | INFO     | current chi2=0.7415035897448353 (change=0.26235510817857777 %)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,919 | INFO     | left removable region: 20
[2026-02-06 08:33:59] 2026-02-06 13:33:20,919 | INFO     | sum of square deviations: 1661741228.8571396
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | sum of deviations: 1035444718.2857137
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | mean x: 1770378792.5714285
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | mean y: 2652634.177142857
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | intersect: -1100485049.5366187
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | chi2: 0.014715025371903096
[2026-02-06 08:33:59] 2026-02-06 13:33:20,920 | INFO     | current memory leak: 0.62 B/s (using 175 data points, chi2=0.01)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,931 | INFO     | could have reported an average CPU frequency of 3076 MHz (10 samples)
[2026-02-06 08:33:59] 2026-02-06 13:33:20,931 | INFO     | ..............................
[2026-02-06 08:33:59] 2026-02-06 13:33:20,931 | INFO     | . Timing measurements:
[2026-02-06 08:33:59] 2026-02-06 13:33:20,931 | INFO     | . get job = 0 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . initial setup = 5 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . payload setup = 4 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . stage-in = 0 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . payload execution = 12526 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . stage-out = 4 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | . log creation = 1 s
[2026-02-06 08:33:59] 2026-02-06 13:33:20,932 | INFO     | ..............................
[2026-02-06 08:33:59] 2026-02-06 13:33:21,397 | INFO     | time since job start (12556s) is within the limit (349056.0s)
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | 
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | job summary report
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | --------------------------------------------------
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | PanDA job id: 7000905348
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | task id: 48317931
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | errors: (none)
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | pilot state: finished 
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | transexitcode: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:21,409 | INFO     | exeerrorcode: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | exeerrordiag: 
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | exitcode: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | exitmsg: OK
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | cpuconsumptiontime: 38399 s
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | nevents: 400
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | neventsw: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | pid: 25268
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | pgrp: 25268
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | corecount: 11
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | event service: False
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | sizes: {0: 2282769, 1: 2283031, 11: 2283059, 12536: 2313042, 12542: 2322040, 12543: 2322096, 12545: 2322418}
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | --------------------------------------------------
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | 
[2026-02-06 08:33:59] 2026-02-06 13:33:21,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 08:33:59] 2026-02-06 13:33:21,595 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,595 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,597 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 08:33:59] 2026-02-06 13:33:21,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,597 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 08:33:59] 2026-02-06 13:33:21,597 | INFO     | job 7000905348 has completed (purged errors)
[2026-02-06 08:33:59] 2026-02-06 13:33:21,597 | INFO     | overall cleanup function is called
[2026-02-06 08:33:59] 2026-02-06 13:33:22,624 | INFO     | --- collectZombieJob: --- 10, [25268]
[2026-02-06 08:33:59] 2026-02-06 13:33:22,624 | INFO     | zombie collector waiting for pid 25268
[2026-02-06 08:33:59] 2026-02-06 13:33:22,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 08:33:59] 2026-02-06 13:33:22,624 | INFO     | collected zombie processes
[2026-02-06 08:33:59] 2026-02-06 13:33:22,624 | INFO     | will attempt to kill all subprocesses of pid=25268
[2026-02-06 08:33:59] 2026-02-06 13:33:23,985 | INFO     | process IDs to be killed: [25268] (in reverse order)
[2026-02-06 08:33:59] 2026-02-06 13:33:24,492 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 08:33:59] 2026-02-06 13:33:24,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 08:33:59] 2026-02-06 13:33:24,518 | INFO     | did not find any defunct processes belonging to 25268
[2026-02-06 08:33:59] 2026-02-06 13:33:24,546 | INFO     | did not find any defunct processes belonging to 25268
[2026-02-06 08:33:59] 2026-02-06 13:33:24,547 | INFO     | ready for new job
[2026-02-06 08:33:59] 2026-02-06 13:33:24,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 08:33:59] 2026-02-06 13:33:24,549 | INFO     | **************************************
[2026-02-06 08:33:59] 2026-02-06 13:33:24,549 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 08:33:59] 2026-02-06 13:33:24,549 | INFO     | **************************************
[2026-02-06 08:33:59] 2026-02-06 13:33:24,549 | INFO     | 
[2026-02-06 08:33:59] 2026-02-06 13:33:24,560 | INFO     | architecture information:
[2026-02-06 08:33:59] 2026-02-06 13:33:24,569 | INFO     | executing command: cat /etc/os-release
[2026-02-06 08:33:59] 2026-02-06 13:33:24,856 | INFO     | cat /etc/os-release:
[2026-02-06 08:33:59] NAME="CentOS Linux"
[2026-02-06 08:33:59] VERSION="7 (Core)"
[2026-02-06 08:33:59] ID="centos"
[2026-02-06 08:33:59] ID_LIKE="rhel fedora"
[2026-02-06 08:33:59] VERSION_ID="7"
[2026-02-06 08:33:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 08:33:59] ANSI_COLOR="0;31"
[2026-02-06 08:33:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 08:33:59] HOME_URL="https://www.centos.org/"
[2026-02-06 08:33:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 08:33:59] 
[2026-02-06 08:33:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 08:33:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 08:33:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 08:33:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 08:33:59] 
[2026-02-06 08:33:59] 2026-02-06 13:33:24,856 | INFO     | **************************************
[2026-02-06 08:33:59] 2026-02-06 13:33:25,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 08:33:59] 2026-02-06 13:33:25,437 | INFO     | sufficient remaining disk space (71821164544 B)
[2026-02-06 08:33:59] 2026-02-06 13:33:25,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 08:33:59] 2026-02-06 13:33:25,438 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 08:33:59] 2026-02-06 13:33:25,438 | INFO     | update_server=False
[2026-02-06 08:33:59] 2026-02-06 13:33:25,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 08:33:59] 2026-02-06 13:33:25,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 08:33:59] 2026-02-06 13:33:25,595 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 08:33:59] 2026-02-06 13:33:25,595 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 08:33:59] 2026-02-06 13:33:25,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 08:33:59] 2026-02-06 13:33:25,595 | INFO     | will abort loop
[2026-02-06 08:33:59] 2026-02-06 13:33:25,961 | INFO     | all payload control threads have been joined
[2026-02-06 08:33:59] 2026-02-06 13:33:26,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 08:33:59] 2026-02-06 13:33:26,443 | INFO     | [job] retrieve thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,507 | INFO     | all data control threads have been joined
[2026-02-06 08:33:59] 2026-02-06 13:33:26,578 | INFO     | all job control threads have been joined
[2026-02-06 08:33:59] 2026-02-06 13:33:26,601 | INFO     | [job] job monitor thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,663 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,664 | INFO     | [data] copytool_in thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,670 | INFO     | [job] validate thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,692 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,931 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:26,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 08:33:59] 2026-02-06 13:33:26,969 | INFO     | [payload] control thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:27,173 | INFO     | [monitor] cgroup control has ended
[2026-02-06 08:33:59] 2026-02-06 13:33:27,319 | INFO     | [job] queue monitor thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:27,513 | INFO     | [data] control thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:27,591 | INFO     | [job] control thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:27,676 | INFO     | [payload] failed_post thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:27,961 | INFO     | [payload] validate_post thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:28,989 | INFO     | [data] copytool_out thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:29,447 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 08:33:59] 2026-02-06 13:33:29,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849336035136)>', '<ExcThread(monitor, started 139848992139008)>']
[2026-02-06 08:33:59] 2026-02-06 13:33:34,521 | INFO     | all workflow threads have been joined
[2026-02-06 08:33:59] 2026-02-06 13:33:34,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 08:33:59] 2026-02-06 13:33:34,521 | INFO     | traces error code: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:34,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 08:33:59] 2026-02-06 13:33:57,550 | INFO     | PID=20823 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | INFO     | .. there are 10 such processes running
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 08:33:59] 2026-02-06 13:33:57,551 | INFO     | [monitor] control thread has ended
[2026-02-06 08:33:59] 2026-02-06 13:33:58,380 [wrapper] ==== pilot stdout END ====
[2026-02-06 08:33:59] 2026-02-06 13:33:58,403 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 08:33:59] 2026-02-06 13:33:58,417 [wrapper] pilotpid: 20823
[2026-02-06 08:33:59] 2026-02-06 13:33:58,439 [wrapper] Pilot exit status: 0
[2026-02-06 08:33:59] 2026-02-06 13:33:58,557 [wrapper] pandaids: 7000905348
[2026-02-06 08:33:59] 2026-02-06 13:33:58,992 [wrapper] cleanup supervisor_pilot  381917 20824
[2026-02-06 08:33:59] 2026-02-06 13:33:59,039 [wrapper] Test setup, not cleaning
[2026-02-06 08:33:59] 2026-02-06 13:33:59,062 [wrapper] apfmon messages muted
[2026-02-06 08:33:59] 2026-02-06 13:33:59,104 [wrapper] ==== wrapper stdout END ====
[2026-02-06 08:33:59] 2026-02-06 13:33:59,170 [wrapper] ==== wrapper stderr END ====
[2026-02-06 08:33:59]  *** Error codes and diagnostics ***
[2026-02-06 08:34:00]     "exeErrorCode": 0,
[2026-02-06 08:34:00]     "exeErrorDiag": "",
[2026-02-06 08:34:00]     "pilotErrorCode": 0,
[2026-02-06 08:34:00]     "pilotErrorDiag": "",
[2026-02-06 08:34:00]  *** Listing of results directory ***
[2026-02-06 08:34:00] total 667336
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas    584627 Feb  5 23:07 pilot3.tar.gz
[2026-02-06 08:34:00] -rwx------. 1 boincer umatlas     36322 Feb  5 23:08 runpilot2-wrapper.sh
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas      5111 Feb  5 23:10 queuedata.json
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas       100 Feb  6 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 08:34:00] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 05:03 run_atlas
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas       105 Feb  6 05:03 job.xml
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas 494956868 Feb  6 05:03 EVNT.48317929._000306.pool.root.1
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 05:03 start_atlas.sh
[2026-02-06 08:34:00] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 05:03 shared
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas    597949 Feb  6 05:03 input.tar.gz
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas         0 Feb  6 05:03 boinc_lockfile
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas      2513 Feb  6 05:03 pandaJob.out
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas        57 Feb  6 05:03 setup.sh.local
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas   1007461 Feb  6 05:03 agis_schedconf.cvmfs.json
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas       442 Feb  6 05:04 workernode_map.json
[2026-02-06 08:34:00] drwx------. 5 boincer umatlas      4096 Feb  6 05:04 pilot3
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas      6842 Feb  6 08:28 init_data.xml
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas 180172723 Feb  6 08:31 HITS.48317931._016814.pool.root.1
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas       531 Feb  6 08:31 boinc_task_state.xml
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas      1043 Feb  6 08:33 memory_monitor_summary.json
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas        95 Feb  6 08:33 pilot_heartbeat.json
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas   1513144 Feb  6 08:33 agis_ddmendpoints.agis.ALL.json
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas    494156 Feb  6 08:33 log.48317931._016814.job.log.tgz.1
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas      6396 Feb  6 08:33 heartbeat.json
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas       821 Feb  6 08:33 pilotlog.txt
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 08:33 boinc_mmap_file
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas        28 Feb  6 08:33 wrapper_checkpoint.txt
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas   1644572 Feb  6 08:33 log.48317931._016814.job.log.1
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas       357 Feb  6 08:33 output.list
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas       620 Feb  6 08:33 runtime_log
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas   2160640 Feb  6 08:33 result.tar.gz
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas      9354 Feb  6 08:33 runtime_log.err
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas       657 Feb  6 08:33 7tLMDm7JS88n9Rq4apOajLDm4fhM0noT9bVooX4SDmopWKDmF5R5Go.diag
[2026-02-06 08:34:00] -rw-r--r--. 1 boincer umatlas     21138 Feb  6 08:34 stderr.txt
[2026-02-06 08:34:00] HITS file was successfully produced:
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas 180172723 Feb  6 08:31 shared/HITS.pool.root.1
[2026-02-06 08:34:00]  *** Contents of shared directory: ***
[2026-02-06 08:34:00] total 662032
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas 494956868 Feb  6 05:03 ATLAS.root_0
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 05:03 start_atlas.sh
[2026-02-06 08:34:00] -rw-r--r--. 2 boincer umatlas    597949 Feb  6 05:03 input.tar.gz
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas 180172723 Feb  6 08:31 HITS.pool.root.1
[2026-02-06 08:34:00] -rw-------. 1 boincer umatlas   2160640 Feb  6 08:33 result.tar.gz
08:34:01 (17135): run_atlas exited; CPU time 38663.114204
08:34:01 (17135): called boinc_finish(0)

</stderr_txt>
]]>

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