Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:48:46 (28349): wrapper (7.7.26015): starting
15:48:46 (28349): wrapper: running run_atlas (--nthreads 2)
[2026-02-06 15:48:46] Arguments: --nthreads 2
[2026-02-06 15:48:46] Threads: 2
[2026-02-06 15:48:46] Checking for CVMFS
[2026-02-06 15:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 15:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 15:48:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 15:48:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 15:48:47] 2.9.2.0 2935 263 52536 155948 1 50 30186322 36864000 0 130560 0 76197 99.968 13683 21822 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 15:48:47] CVMFS is ok
[2026-02-06 15:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 15:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 15:48:47] Further information can be found at the LHC@home message board.
[2026-02-06 15:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 15:48:47] Checking for apptainer binary...
[2026-02-06 15:48:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 15:48:47] Running /usr/bin/apptainer --version
[2026-02-06 15:48:47] apptainer version 1.4.1-1.1
[2026-02-06 15:48:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 15:48:47] magicA244
[2026-02-06 15:48:47] apptainer works
[2026-02-06 15:48:47] Set ATHENA_PROC_NUMBER=2
[2026-02-06 15:48:47] Set ATHENA_CORE_NUMBER=2
[2026-02-06 15:48:47] Starting ATLAS job with PandaID=6996351811
[2026-02-06 15:48:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 17:51:26]  *** The last 200 lines of the pilot log: ***
[2026-02-06 17:51:26] 2026-02-06 16:50:28,556 | INFO     | all job control threads have been joined
[2026-02-06 17:51:26] 2026-02-06 16:50:29,010 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,046 | INFO     | [data] control thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,097 | INFO     | [job] validate thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,161 | INFO     | [data] copytool_in thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,197 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,260 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,341 | INFO     | [payload] validate_post thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,342 | INFO     | [data] copytool_out thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,562 | INFO     | [job] control thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:29,930 | INFO     | job.realtimelogging is not enabled
[2026-02-06 17:51:26] 2026-02-06 16:50:30,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 17:51:26] 2026-02-06 16:50:30,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:34,142 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 17:51:26] 2026-02-06 16:50:57,966 | INFO     | PID=32375 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-06 17:51:26] 2026-02-06 16:50:57,966 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 17:51:26] 2026-02-06 16:50:57,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 17:51:26] 2026-02-06 16:50:57,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 17:51:26] 2026-02-06 16:51:19,271 | INFO     | [monitor] cgroup control has ended
[2026-02-06 17:51:26] 2026-02-06 16:51:21,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053738403648)>', '<ExcThread(monitor, started 140052961154816)>']
[2026-02-06 17:51:26] 2026-02-06 16:51:21,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 17:51:26] 2026-02-06 16:51:21,087 | INFO     | [monitor] control thread has ended
[2026-02-06 17:51:26] 2026-02-06 16:51:26,111 | INFO     | all workflow threads have been joined
[2026-02-06 17:51:26] 2026-02-06 16:51:26,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 17:51:26] 2026-02-06 16:51:26,112 | INFO     | traces error code: 0
[2026-02-06 17:51:26] 2026-02-06 16:51:26,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 17:51:26] 2026-02-06 16:51:26,155 [wrapper] ==== pilot stdout END ====
[2026-02-06 17:51:26] 2026-02-06 16:51:26,158 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 17:51:26] 2026-02-06 16:51:26,160 [wrapper] pilotpid: 32375
[2026-02-06 17:51:26] 2026-02-06 16:51:26,162 [wrapper] Pilot exit status: 0
[2026-02-06 17:51:26] 2026-02-06 16:51:26,167 [wrapper] pandaids: 6996351811
[2026-02-06 17:51:26] 2026-02-06 16:51:26,178 [wrapper] cleanup supervisor_pilot   41982 32376
[2026-02-06 17:51:26] 2026-02-06 16:51:26,180 [wrapper] Test setup, not cleaning
[2026-02-06 17:51:26] 2026-02-06 16:51:26,182 [wrapper] apfmon messages muted
[2026-02-06 17:51:26] 2026-02-06 16:51:26,184 [wrapper] ==== wrapper stdout END ====
[2026-02-06 17:51:26] 2026-02-06 16:51:26,186 [wrapper] ==== wrapper stderr END ====
[2026-02-06 17:51:26]  *** Error codes and diagnostics ***
[2026-02-06 17:51:26]     "exeErrorCode": 0,
[2026-02-06 17:51:26]     "exeErrorDiag": "",
[2026-02-06 17:51:26]     "pilotErrorCode": 0,
[2026-02-06 17:51:26]     "pilotErrorDiag": "",
[2026-02-06 17:51:26]  *** Listing of results directory ***
[2026-02-06 17:51:26] total 671396
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc    584627 Feb  6 06:55 pilot3.tar.gz
[2026-02-06 17:51:26] -rwx------ 1 boinc boinc     36322 Feb  6 06:56 runpilot2-wrapper.sh
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      5111 Feb  6 06:56 queuedata.json
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc       100 Feb  6 15:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 17:51:26] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 15:48 run_atlas
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc       105 Feb  6 15:48 job.xml
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc 500182692 Feb  6 15:48 EVNT.48442096._000061.pool.root.1
[2026-02-06 17:51:26] drwxrwx--x 2 boinc boinc      4096 Feb  6 15:48 shared
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc    597951 Feb  6 15:48 input.tar.gz
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc     15845 Feb  6 15:48 start_atlas.sh
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc         0 Feb  6 15:48 boinc_setup_complete
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      6208 Feb  6 15:48 init_data.xml
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc         0 Feb  6 15:48 boinc_lockfile
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      2528 Feb  6 15:48 pandaJob.out
[2026-02-06 17:51:26] -rw------- 1 boinc boinc   1009504 Feb  6 15:49 agis_schedconf.cvmfs.json
[2026-02-06 17:51:26] -rw------- 1 boinc boinc   1513144 Feb  6 15:49 agis_ddmendpoints.agis.ALL.json
[2026-02-06 17:51:26] -rw------- 1 boinc boinc       429 Feb  6 15:49 workernode_map.json
[2026-02-06 17:51:26] drwx------ 5 boinc boinc      4096 Feb  6 15:49 pilot3
[2026-02-06 17:51:26] -rw------- 1 boinc boinc 180747677 Feb  6 17:50 HITS.48442098._003023.pool.root.1
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc       530 Feb  6 17:50 boinc_task_state.xml
[2026-02-06 17:51:26] -rw------- 1 boinc boinc      1020 Feb  6 17:50 memory_monitor_summary.json
[2026-02-06 17:51:26] -rw------- 1 boinc boinc    283626 Feb  6 17:50 log.48442098._003023.job.log.tgz.1
[2026-02-06 17:51:26] -rw------- 1 boinc boinc      6315 Feb  6 17:50 heartbeat.json
[2026-02-06 17:51:26] -rw------- 1 boinc boinc        95 Feb  6 17:50 pilot_heartbeat.json
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      8192 Feb  6 17:51 boinc_mmap_file
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc        27 Feb  6 17:51 wrapper_checkpoint.txt
[2026-02-06 17:51:26] -rw------- 1 boinc boinc      4820 Feb  6 17:51 pilotlog.txt
[2026-02-06 17:51:26] -rw------- 1 boinc boinc   1044945 Feb  6 17:51 log.48442098._003023.job.log.1
[2026-02-06 17:51:26] -rw------- 1 boinc boinc       357 Feb  6 17:51 output.list
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc       620 Feb  6 17:51 runtime_log
[2026-02-06 17:51:26] -rw------- 1 boinc boinc   1341440 Feb  6 17:51 result.tar.gz
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      8911 Feb  6 17:51 runtime_log.err
[2026-02-06 17:51:26] -rw------- 1 boinc boinc       660 Feb  6 17:51 XJCODmZ0T88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQDYKDmfoxOfn.diag
[2026-02-06 17:51:26] -rw-r--r-- 1 boinc boinc      6127 Feb  6 17:51 stderr.txt
[2026-02-06 17:51:26] HITS file was successfully produced:
[2026-02-06 17:51:26] -rw------- 1 boinc boinc 180747677 Feb  6 17:50 shared/HITS.pool.root.1
[2026-02-06 17:51:26]  *** Contents of shared directory: ***
[2026-02-06 17:51:26] total 666892
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc 500182692 Feb  6 15:48 ATLAS.root_0
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc    597951 Feb  6 15:48 input.tar.gz
[2026-02-06 17:51:26] -rw-r--r-- 2 boinc boinc     15845 Feb  6 15:48 start_atlas.sh
[2026-02-06 17:51:26] -rw------- 1 boinc boinc 180747677 Feb  6 17:50 HITS.pool.root.1
[2026-02-06 17:51:26] -rw------- 1 boinc boinc   1341440 Feb  6 17:51 result.tar.gz
17:51:27 (28349): run_atlas exited; CPU time 14151.544200
17:51:27 (28349): called boinc_finish(0)

</stderr_txt>
]]>

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