Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:05:08 (316883): wrapper (7.7.26015): starting
07:05:08 (316883): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 07:05:08] Arguments: --nthreads 12
[2026-02-06 07:05:08] Threads: 12
[2026-02-06 07:05:08] Checking for CVMFS
[2026-02-06 07:05:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 07:05:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 07:05:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 07:05:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 07:05:10] 2.11.5.0 1269751 32555 204916 155948 3 203 32011219 45568000 25338 130560 0 313029956 99.830 167576926 24385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 07:05:10] CVMFS is ok
[2026-02-06 07:05:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 07:05:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 07:05:10] Further information can be found at the LHC@home message board.
[2026-02-06 07:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 07:05:10] Checking for apptainer binary...
[2026-02-06 07:05:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 07:05:10] Running /usr/bin/apptainer --version
[2026-02-06 07:05:10] apptainer version 1.4.1-1.el9
[2026-02-06 07:05:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 07:05:10] wns0072.triumf.lcg
[2026-02-06 07:05:10] apptainer works
[2026-02-06 07:05:10] Set ATHENA_PROC_NUMBER=12
[2026-02-06 07:05:10] Set ATHENA_CORE_NUMBER=12
[2026-02-06 07:05:10] Starting ATLAS job with PandaID=6997084888
[2026-02-06 07:05:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 07:09:53]  *** The last 200 lines of the pilot log: ***
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | WARNING  | wrong length of table data, x=[1770390389.0], y=[1340.0] (must be same and length>=4)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . Timing measurements:
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . get job = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . initial setup = 14 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload setup = 17 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-in = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload execution = 35 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-out = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . log creation = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6997084888/pilotlog.txt
[2026-02-06 07:09:53] 2026-02-06 15:08:52,545 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 07:09:53] - Log from pilotlog.txt -
[2026-02-06 07:09:53] 2026-02-06 15:08:52,495 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6997084888/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | INFO     | extracted standard info from prmon json
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | WARNING  | wrong length of table data, x=[1770390389.0], y=[1340.0] (must be same and length>=4)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . Timing measurements:
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . get job = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . initial setup = 14 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload setup = 17 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-in = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload execution = 35 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-out = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . log creation = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6997084888/pilotlog.txt
[2026-02-06 07:09:53] 2026-02-06 15:08:52,545 | WARNING  | 
[2026-02-06 07:09:53] [begin log extracts]
[2026-02-06 07:09:53] - Log from pilotlog.txt -
[2026-02-06 07:09:53] 2026-02-06 15:08:52,495 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6997084888/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | INFO     | extracted standard info from prmon json
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 07:09:53] 2026-02-06 15:08:52,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | WARNING  | wrong length of table data, x=[1770390389.0], y=[1340.0] (must be same and length>=4)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | could have reported an average CPU frequency of 2787 MHz (4 samples)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . Timing measurements:
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . get job = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . initial setup = 14 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload setup = 17 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-in = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . payload execution = 35 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . stage-out = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | . log creation = 0 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,509 | INFO     | ..............................
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 07:09:53] 2026-02-06 15:08:52,510 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6997084888/pilotlog.txt
[2026-02-06 07:09:53] [end log extracts]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,545 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,546 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 07:09:53] 2026-02-06 15:08:52,727 | INFO     | 
[2026-02-06 07:09:53] 2026-02-06 15:08:52,727 | INFO     | job summary report
[2026-02-06 07:09:53] 2026-02-06 15:08:52,727 | INFO     | --------------------------------------------------
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | PanDA job id: 6997084888
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | task id: 48318010
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 07:06:44,605 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | pilot state: failed 
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | transexitcode: 65
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | exeerrorcode: 65
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | exitcode: 65
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | cpuconsumptiontime: 14 s
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | nevents: 0
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | neventsw: 0
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | pid: 325317
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | pgrp: 325317
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | corecount: 12
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | event service: False
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | sizes: {0: 2282002, 1: 2283117, 12: 2283117, 57: 2306471, 58: 2310767, 176: 2310965}
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | --------------------------------------------------
[2026-02-06 07:09:53] 2026-02-06 15:08:52,728 | INFO     | 
[2026-02-06 07:09:53] 2026-02-06 15:08:52,729 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 07:09:53] 2026-02-06 15:08:52,769 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,769 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,769 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 07:09:53] 2026-02-06 15:08:52,770 | INFO     | job 6997084888 has completed (purged errors)
[2026-02-06 07:09:53] 2026-02-06 15:08:52,771 | INFO     | overall cleanup function is called
[2026-02-06 07:09:53] 2026-02-06 15:08:53,787 | INFO     | --- collectZombieJob: --- 10, [325317]
[2026-02-06 07:09:53] 2026-02-06 15:08:53,787 | INFO     | zombie collector waiting for pid 325317
[2026-02-06 07:09:53] 2026-02-06 15:08:53,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 07:09:53] 2026-02-06 15:08:53,787 | INFO     | collected zombie processes
[2026-02-06 07:09:53] 2026-02-06 15:08:53,787 | INFO     | will attempt to kill all subprocesses of pid=325317
[2026-02-06 07:09:53] 2026-02-06 15:08:54,453 | INFO     | process IDs to be killed: [325317] (in reverse order)
[2026-02-06 07:09:53] 2026-02-06 15:08:54,963 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 07:09:53] 2026-02-06 15:08:54,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 07:09:53] 2026-02-06 15:08:55,003 | INFO     | did not find any defunct processes belonging to 325317
[2026-02-06 07:09:53] 2026-02-06 15:08:55,025 | INFO     | did not find any defunct processes belonging to 325317
[2026-02-06 07:09:53] 2026-02-06 15:08:55,025 | INFO     | ready for new job
[2026-02-06 07:09:53] 2026-02-06 15:08:55,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 07:09:53] 2026-02-06 15:08:55,046 | INFO     | **************************************
[2026-02-06 07:09:53] 2026-02-06 15:08:55,046 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 07:09:53] 2026-02-06 15:08:55,046 | INFO     | **************************************
[2026-02-06 07:09:53] 2026-02-06 15:08:55,046 | INFO     | 
[2026-02-06 07:09:53] 2026-02-06 15:08:55,048 | INFO     | architecture information:
[2026-02-06 07:09:53] 2026-02-06 15:08:55,058 | INFO     | executing command: cat /etc/os-release
[2026-02-06 07:09:53] 2026-02-06 15:08:55,158 | INFO     | cat /etc/os-release:
[2026-02-06 07:09:53] NAME="CentOS Linux"
[2026-02-06 07:09:53] VERSION="7 (Core)"
[2026-02-06 07:09:53] ID="centos"
[2026-02-06 07:09:53] ID_LIKE="rhel fedora"
[2026-02-06 07:09:53] VERSION_ID="7"
[2026-02-06 07:09:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 07:09:53] ANSI_COLOR="0;31"
[2026-02-06 07:09:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 07:09:53] HOME_URL="https://www.centos.org/"
[2026-02-06 07:09:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 07:09:53] 
[2026-02-06 07:09:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 07:09:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 07:09:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 07:09:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 07:09:53] 
[2026-02-06 07:09:53] 2026-02-06 15:08:55,158 | INFO     | **************************************
[2026-02-06 07:09:53] 2026-02-06 15:08:55,662 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 07:09:53] 2026-02-06 15:08:55,736 | INFO     | sufficient remaining disk space (1915134935040 B)
[2026-02-06 07:09:53] 2026-02-06 15:08:55,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 07:09:53] 2026-02-06 15:08:55,736 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 07:09:53] 2026-02-06 15:08:55,736 | INFO     | update_server=False
[2026-02-06 07:09:53] 2026-02-06 15:08:55,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 07:09:53] 2026-02-06 15:08:56,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 07:09:53] 2026-02-06 15:08:56,358 | INFO     | all data control threads have been joined
[2026-02-06 07:09:53] 2026-02-06 15:08:56,629 | INFO     | all payload control threads have been joined
[2026-02-06 07:09:53] 2026-02-06 15:08:56,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 07:09:53] 2026-02-06 15:08:56,648 | INFO     | aborting loop
[2026-02-06 07:09:53] 2026-02-06 15:08:56,742 | INFO     | [job] retrieve thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:56,765 | INFO     | all job control threads have been joined
[2026-02-06 07:09:53] 2026-02-06 15:08:56,860 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:56,943 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,163 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,364 | INFO     | [data] control thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,603 | INFO     | [data] copytool_in thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,636 | INFO     | [payload] control thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,654 | INFO     | [job] job monitor thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,728 | INFO     | [payload] validate_post thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,730 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:57,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 07:09:53] 2026-02-06 15:08:57,771 | INFO     | [job] control thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:58,152 | INFO     | [job] validate thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:58,178 | INFO     | [payload] failed_post thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:58,333 | INFO     | [data] copytool_out thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:58,752 | INFO     | [job] queue monitor thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:08:58,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 07:09:53] 2026-02-06 15:09:02,862 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 07:09:53] 2026-02-06 15:09:24,655 | INFO     | PID=320639 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 07:09:53] 2026-02-06 15:09:24,656 | INFO     | .. there are 49 such processes running
[2026-02-06 07:09:53] 2026-02-06 15:09:24,656 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 07:09:53] 2026-02-06 15:09:24,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 07:09:53] 2026-02-06 15:09:24,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 07:09:53] 2026-02-06 15:09:45,132 | INFO     | [monitor] cgroup control has ended
[2026-02-06 07:09:53] 2026-02-06 15:09:47,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168661329728)>', '<ExcThread(monitor, started 140167994140416)>']
[2026-02-06 07:09:53] 2026-02-06 15:09:47,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 07:09:53] 2026-02-06 15:09:47,798 | INFO     | [monitor] control thread has ended
[2026-02-06 07:09:53] 2026-02-06 15:09:52,223 | INFO     | all workflow threads have been joined
[2026-02-06 07:09:53] 2026-02-06 15:09:52,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 07:09:53] 2026-02-06 15:09:52,223 | INFO     | traces error code: 0
[2026-02-06 07:09:53] 2026-02-06 15:09:52,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 07:09:53] 2026-02-06 15:09:53,157 [wrapper] ==== pilot stdout END ====
[2026-02-06 07:09:53] 2026-02-06 15:09:53,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 07:09:53] 2026-02-06 15:09:53,186 [wrapper] pilotpid: 320639
[2026-02-06 07:09:53] 2026-02-06 15:09:53,192 [wrapper] Pilot exit status: 0
[2026-02-06 07:09:53] 2026-02-06 15:09:53,275 [wrapper] pandaids: 6997084888
[2026-02-06 07:09:53] 2026-02-06 15:09:53,548 [wrapper] cleanup supervisor_pilot  320645 320640
[2026-02-06 07:09:53] 2026-02-06 15:09:53,559 [wrapper] Test setup, not cleaning
[2026-02-06 07:09:53] 2026-02-06 15:09:53,578 [wrapper] apfmon messages muted
[2026-02-06 07:09:53] 2026-02-06 15:09:53,592 [wrapper] ==== wrapper stdout END ====
[2026-02-06 07:09:53] 2026-02-06 15:09:53,629 [wrapper] ==== wrapper stderr END ====
[2026-02-06 07:09:53]  *** Error codes and diagnostics ***
[2026-02-06 07:09:53]     "exeErrorCode": 65,
[2026-02-06 07:09:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 07:09:53]     "pilotErrorCode": 1305,
[2026-02-06 07:09:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 07:09:53]  *** Listing of results directory ***
[2026-02-06 07:09:53] total 488404
[2026-02-06 07:09:53] -rwx------. 1 boinc boinc     36322 Feb  6 01:17 runpilot2-wrapper.sh
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc    584627 Feb  6 01:21 pilot3.tar.gz
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      5111 Feb  6 01:22 queuedata.json
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc       100 Feb  6 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 07:09:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 07:05 run_atlas
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc       105 Feb  6 07:05 job.xml
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc 496000220 Feb  6 07:05 EVNT.48318008._000179.pool.root.1
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      6594 Feb  6 07:05 init_data.xml
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc     15845 Feb  6 07:05 start_atlas.sh
[2026-02-06 07:09:53] drwxrwx--x. 2 boinc boinc      4096 Feb  6 07:05 shared
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc    597948 Feb  6 07:05 input.tar.gz
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc         0 Feb  6 07:05 boinc_lockfile
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      2526 Feb  6 07:05 pandaJob.out
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc   1009504 Feb  6 07:05 agis_schedconf.cvmfs.json
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc   1513144 Feb  6 07:05 agis_ddmendpoints.agis.ALL.json
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc       445 Feb  6 07:05 workernode_map.json
[2026-02-06 07:09:53] drwx------. 5 boinc boinc      4096 Feb  6 07:05 pilot3
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc       956 Feb  6 07:06 memory_monitor_summary.json
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc     20880 Feb  6 07:06 log.48318010._009957.job.log.tgz.1
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc        95 Feb  6 07:08 pilot_heartbeat.json
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc      7025 Feb  6 07:08 heartbeat.json
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc       524 Feb  6 07:09 boinc_task_state.xml
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc        22 Feb  6 07:09 wrapper_checkpoint.txt
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      8192 Feb  6 07:09 boinc_mmap_file
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc      4818 Feb  6 07:09 pilotlog.txt
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc     84396 Feb  6 07:09 log.48318010._009957.job.log.1
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc       188 Feb  6 07:09 output.list
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc       620 Feb  6 07:09 runtime_log
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc    122880 Feb  6 07:09 result.tar.gz
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc       643 Feb  6 07:09 yvFKDmL9W88n9Rq4apOajLDm4fhM0noT9bVooX4SDmUPYKDmrxtpSo.diag
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      8635 Feb  6 07:09 runtime_log.err
[2026-02-06 07:09:53] -rw-r--r--. 1 boinc boinc      2142 Feb  6 07:09 stderr.txt
[2026-02-06 07:09:53] No HITS result produced
[2026-02-06 07:09:53]  *** Contents of shared directory: ***
[2026-02-06 07:09:53] total 485100
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc 496000220 Feb  6 07:05 ATLAS.root_0
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc     15845 Feb  6 07:05 start_atlas.sh
[2026-02-06 07:09:53] -rw-r--r--. 2 boinc boinc    597948 Feb  6 07:05 input.tar.gz
[2026-02-06 07:09:53] -rw-------. 1 boinc boinc    122880 Feb  6 07:09 result.tar.gz
07:09:55 (316883): run_atlas exited; CPU time 20.853188
07:09:55 (316883): called boinc_finish(0)

</stderr_txt>
]]>

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