Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:26:29 (3581851): wrapper (7.7.26015): starting
15:26:29 (3581851): wrapper: running run_atlas (--nthreads 3)
[2026-02-06 15:26:29] Arguments: --nthreads 3
[2026-02-06 15:26:29] Threads: 3
[2026-02-06 15:26:29] Checking for CVMFS
[2026-02-06 15:26:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 15:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 15:26:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 15:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 15:26:29] 2.9.2.0 3483677 601 67616 155948 0 50 23949768 36864000 0 130560 0 279840 99.983 26065 6747 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 15:26:29] CVMFS is ok
[2026-02-06 15:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 15:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 15:26:29] Further information can be found at the LHC@home message board.
[2026-02-06 15:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 15:26:29] Checking for apptainer binary...
[2026-02-06 15:26:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 15:26:29] Running /usr/bin/apptainer --version
[2026-02-06 15:26:29] apptainer version 1.4.1-1.1
[2026-02-06 15:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 15:26:29] magicA252
[2026-02-06 15:26:29] apptainer works
[2026-02-06 15:26:29] Set ATHENA_PROC_NUMBER=3
[2026-02-06 15:26:29] Set ATHENA_CORE_NUMBER=3
[2026-02-06 15:26:29] Starting ATLAS job with PandaID=6995863135
[2026-02-06 15:26:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 16:57:51]  *** The last 200 lines of the pilot log: ***
[2026-02-06 16:57:51] 2026-02-06 15:56:51,386 | INFO     | executing command: cat /etc/os-release
[2026-02-06 16:57:51] 2026-02-06 15:56:51,395 | INFO     | cat /etc/os-release:
[2026-02-06 16:57:51] NAME="CentOS Linux"
[2026-02-06 16:57:51] VERSION="7 (Core)"
[2026-02-06 16:57:51] ID="centos"
[2026-02-06 16:57:51] ID_LIKE="rhel fedora"
[2026-02-06 16:57:51] VERSION_ID="7"
[2026-02-06 16:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 16:57:51] ANSI_COLOR="0;31"
[2026-02-06 16:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 16:57:51] HOME_URL="https://www.centos.org/"
[2026-02-06 16:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 16:57:51] 
[2026-02-06 16:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 16:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 16:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 16:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 16:57:51] 
[2026-02-06 16:57:51] 2026-02-06 15:56:51,396 | INFO     | **************************************
[2026-02-06 16:57:51] 2026-02-06 15:56:51,899 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | INFO     | sufficient remaining disk space (378003259392 B)
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | INFO     | update_server=False
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:57:51] 2026-02-06 15:56:51,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 16:57:51] 2026-02-06 15:56:52,113 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 16:57:51] 2026-02-06 15:56:52,113 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 16:57:51] 2026-02-06 15:56:52,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 16:57:51] 2026-02-06 15:56:52,113 | INFO     | will abort loop
[2026-02-06 16:57:51] 2026-02-06 15:56:52,259 | INFO     | all job control threads have been joined
[2026-02-06 16:57:51] 2026-02-06 15:56:52,559 | INFO     | all data control threads have been joined
[2026-02-06 16:57:51] 2026-02-06 15:56:52,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 16:57:51] 2026-02-06 15:56:52,918 | INFO     | [job] retrieve thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:52,918 | INFO     | [job] queue monitor thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,017 | INFO     | all payload control threads have been joined
[2026-02-06 16:57:51] 2026-02-06 15:56:53,119 | INFO     | [job] job monitor thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,260 | INFO     | [job] control thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,406 | INFO     | [payload] validate_post thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,565 | INFO     | [data] control thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,690 | INFO     | [job] validate thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,725 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,764 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,783 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,966 | INFO     | [data] copytool_in thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:53,983 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:54,023 | INFO     | [payload] control thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:54,481 | INFO     | [payload] failed_post thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:54,857 | INFO     | [data] copytool_out thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:56:55,916 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 16:57:51] 2026-02-06 15:57:22,300 | INFO     | PID=3585895 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 16:57:51] 2026-02-06 15:57:22,301 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 16:57:51] 2026-02-06 15:57:22,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 16:57:51] 2026-02-06 15:57:22,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 16:57:51] 2026-02-06 15:57:46,427 | INFO     | [monitor] cgroup control has ended
[2026-02-06 16:57:51] 2026-02-06 15:57:46,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839636039488)>', '<ExcThread(monitor, started 139838992918272)>']
[2026-02-06 16:57:51] 2026-02-06 15:57:47,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 16:57:51] 2026-02-06 15:57:47,431 | INFO     | [monitor] control thread has ended
[2026-02-06 16:57:51] 2026-02-06 15:57:51,443 | INFO     | all workflow threads have been joined
[2026-02-06 16:57:51] 2026-02-06 15:57:51,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 16:57:51] 2026-02-06 15:57:51,443 | INFO     | traces error code: 0
[2026-02-06 16:57:51] 2026-02-06 15:57:51,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 16:57:51] 2026-02-06 15:57:51,491 [wrapper] ==== pilot stdout END ====
[2026-02-06 16:57:51] 2026-02-06 15:57:51,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 16:57:51] 2026-02-06 15:57:51,496 [wrapper] pilotpid: 3585895
[2026-02-06 16:57:51] 2026-02-06 15:57:51,499 [wrapper] Pilot exit status: 0
[2026-02-06 16:57:51] 2026-02-06 15:57:51,506 [wrapper] pandaids: 6995863135
[2026-02-06 16:57:51] 2026-02-06 15:57:51,524 [wrapper] cleanup supervisor_pilot 3595738 3585896
[2026-02-06 16:57:51] 2026-02-06 15:57:51,527 [wrapper] Test setup, not cleaning
[2026-02-06 16:57:51] 2026-02-06 15:57:51,529 [wrapper] apfmon messages muted
[2026-02-06 16:57:51] 2026-02-06 15:57:51,532 [wrapper] ==== wrapper stdout END ====
[2026-02-06 16:57:51] 2026-02-06 15:57:51,534 [wrapper] ==== wrapper stderr END ====
[2026-02-06 16:57:51]  *** Error codes and diagnostics ***
[2026-02-06 16:57:51]     "exeErrorCode": 0,
[2026-02-06 16:57:51]     "exeErrorDiag": "",
[2026-02-06 16:57:51]     "pilotErrorCode": 0,
[2026-02-06 16:57:51]     "pilotErrorDiag": "",
[2026-02-06 16:57:51]  *** Listing of results directory ***
[2026-02-06 16:57:51] total 729856
[2026-02-06 16:57:51] -rwx------ 1 boinc boinc     36322 Feb  6 05:56 runpilot2-wrapper.sh
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:58 pilot3.tar.gz
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:58 queuedata.json
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc       100 Feb  6 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 16:57:51] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 15:26 run_atlas
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc       105 Feb  6 15:26 job.xml
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc 538645137 Feb  6 15:26 EVNT.48318024._000056.pool.root.1
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc    597964 Feb  6 15:26 input.tar.gz
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc     15845 Feb  6 15:26 start_atlas.sh
[2026-02-06 16:57:51] drwxrwx--x 2 boinc boinc      4096 Feb  6 15:26 shared
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc         0 Feb  6 15:26 boinc_setup_complete
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      6448 Feb  6 15:26 init_data.xml
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc         0 Feb  6 15:26 boinc_lockfile
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      2526 Feb  6 15:26 pandaJob.out
[2026-02-06 16:57:51] -rw------- 1 boinc boinc   1009504 Feb  6 15:26 agis_schedconf.cvmfs.json
[2026-02-06 16:57:51] -rw------- 1 boinc boinc   1513144 Feb  6 15:26 agis_ddmendpoints.agis.ALL.json
[2026-02-06 16:57:51] -rw------- 1 boinc boinc       425 Feb  6 15:26 workernode_map.json
[2026-02-06 16:57:51] drwx------ 5 boinc boinc      4096 Feb  6 15:26 pilot3
[2026-02-06 16:57:51] -rw------- 1 boinc boinc 202676835 Feb  6 16:56 HITS.48318026._003380.pool.root.1
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc       530 Feb  6 16:56 boinc_task_state.xml
[2026-02-06 16:57:51] -rw------- 1 boinc boinc      1020 Feb  6 16:56 memory_monitor_summary.json
[2026-02-06 16:57:51] -rw------- 1 boinc boinc    274157 Feb  6 16:56 log.48318026._003380.job.log.tgz.1
[2026-02-06 16:57:51] -rw------- 1 boinc boinc      6308 Feb  6 16:56 heartbeat.json
[2026-02-06 16:57:51] -rw------- 1 boinc boinc        95 Feb  6 16:57 pilot_heartbeat.json
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      8192 Feb  6 16:57 boinc_mmap_file
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc        27 Feb  6 16:57 wrapper_checkpoint.txt
[2026-02-06 16:57:51] -rw------- 1 boinc boinc      4934 Feb  6 16:57 pilotlog.txt
[2026-02-06 16:57:51] -rw------- 1 boinc boinc    787500 Feb  6 16:57 log.48318026._003380.job.log.1
[2026-02-06 16:57:51] -rw------- 1 boinc boinc       357 Feb  6 16:57 output.list
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc       620 Feb  6 16:57 runtime_log
[2026-02-06 16:57:51] -rw------- 1 boinc boinc   1075200 Feb  6 16:57 result.tar.gz
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      8911 Feb  6 16:57 runtime_log.err
[2026-02-06 16:57:51] -rw------- 1 boinc boinc       660 Feb  6 16:57 4PlKDme4S88n9Rq4apOajLDm4fhM0noT9bVooX4SDmARXKDmqcjIlm.diag
[2026-02-06 16:57:51] -rw-r--r-- 1 boinc boinc      9114 Feb  6 16:57 stderr.txt
[2026-02-06 16:57:51] HITS file was successfully produced:
[2026-02-06 16:57:51] -rw------- 1 boinc boinc 202676835 Feb  6 16:56 shared/HITS.pool.root.1
[2026-02-06 16:57:51]  *** Contents of shared directory: ***
[2026-02-06 16:57:51] total 725612
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc 538645137 Feb  6 15:26 ATLAS.root_0
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc    597964 Feb  6 15:26 input.tar.gz
[2026-02-06 16:57:51] -rw-r--r-- 2 boinc boinc     15845 Feb  6 15:26 start_atlas.sh
[2026-02-06 16:57:51] -rw------- 1 boinc boinc 202676835 Feb  6 16:56 HITS.pool.root.1
[2026-02-06 16:57:51] -rw------- 1 boinc boinc   1075200 Feb  6 16:57 result.tar.gz
16:57:53 (3581851): run_atlas exited; CPU time 15494.245654
16:57:53 (3581851): called boinc_finish(0)

</stderr_txt>
]]>

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