Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:26:37 (2261836): wrapper (7.7.26015): starting
05:26:37 (2261836): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 05:26:37] Arguments: --nthreads 12
[2026-02-06 05:26:37] Threads: 12
[2026-02-06 05:26:37] Checking for CVMFS
[2026-02-06 05:26:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 05:26:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 05:26:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 05:26:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 05:26:41] 2.11.5.0 1139287 96943 166768 155947 2 194 38813912 45568000 19822 130560 0 572564470 99.806 348542032 17938 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 05:26:41] CVMFS is ok
[2026-02-06 05:26:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 05:26:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 05:26:41] Further information can be found at the LHC@home message board.
[2026-02-06 05:26:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 05:26:41] Checking for apptainer binary...
[2026-02-06 05:26:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 05:26:41] Running /usr/bin/apptainer --version
[2026-02-06 05:26:41] apptainer version 1.4.1-1.el9
[2026-02-06 05:26:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 05:26:43] wns0042.triumf.lcg
[2026-02-06 05:26:43] apptainer works
[2026-02-06 05:26:43] Set ATHENA_PROC_NUMBER=12
[2026-02-06 05:26:43] Set ATHENA_CORE_NUMBER=12
[2026-02-06 05:26:43] Starting ATLAS job with PandaID=6996585355
[2026-02-06 05:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 05:33:10]  *** The last 200 lines of the pilot log: ***
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | wrong length of table data, x=[1770384579.0], y=[2040.0] (must be same and length>=4)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | could have reported an average CPU frequency of 1361 MHz (4 samples)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . Timing measurements:
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . get job = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . initial setup = 36 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload setup = 46 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-in = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload execution = 88 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-out = 2 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . log creation = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:33:10] 2026-02-06 13:32:28,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996585355/pilotlog.txt
[2026-02-06 05:33:10] 2026-02-06 13:32:28,210 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 05:33:10] - Log from pilotlog.txt -
[2026-02-06 05:33:10] 2026-02-06 13:32:28,085 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996585355/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | INFO     | extracted standard info from prmon json
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | wrong length of table data, x=[1770384579.0], y=[2040.0] (must be same and length>=4)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | could have reported an average CPU frequency of 1361 MHz (4 samples)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . Timing measurements:
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . get job = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . initial setup = 36 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload setup = 46 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-in = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload execution = 88 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-out = 2 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . log creation = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:33:10] 2026-02-06 13:32:28,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996585355/pilotlog.txt
[2026-02-06 05:33:10] 2026-02-06 13:32:28,211 | WARNING  | 
[2026-02-06 05:33:10] [begin log extracts]
[2026-02-06 05:33:10] - Log from pilotlog.txt -
[2026-02-06 05:33:10] 2026-02-06 13:32:28,085 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996585355/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | INFO     | extracted standard info from prmon json
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 05:33:10] 2026-02-06 13:32:28,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:33:10] 2026-02-06 13:32:28,087 | WARNING  | wrong length of table data, x=[1770384579.0], y=[2040.0] (must be same and length>=4)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | could have reported an average CPU frequency of 1361 MHz (4 samples)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . Timing measurements:
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . get job = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . initial setup = 36 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload setup = 46 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-in = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . payload execution = 88 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . stage-out = 2 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,088 | INFO     | . log creation = 0 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | ..............................
[2026-02-06 05:33:10] 2026-02-06 13:32:28,089 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:33:10] 2026-02-06 13:32:28,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996585355/pilotlog.txt
[2026-02-06 05:33:10] [end log extracts]
[2026-02-06 05:33:10] 2026-02-06 13:32:28,212 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,213 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 05:33:10] 2026-02-06 13:32:28,744 | INFO     | 
[2026-02-06 05:33:10] 2026-02-06 13:32:28,744 | INFO     | job summary report
[2026-02-06 05:33:10] 2026-02-06 13:32:28,744 | INFO     | --------------------------------------------------
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | PanDA job id: 6996585355
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | task id: 48310749
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 05:30:12,287 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | pilot state: failed 
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | transexitcode: 65
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | exeerrorcode: 65
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,745 | INFO     | exitcode: 65
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | cpuconsumptiontime: 25 s
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | nevents: 0
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | neventsw: 0
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | pid: 2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | pgrp: 2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | corecount: 12
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | event service: False
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | sizes: {0: 2282601, 1: 2283034, 2: 2283062, 139: 2306232, 144: 2310524, 145: 2310552, 264: 2310846}
[2026-02-06 05:33:10] 2026-02-06 13:32:28,746 | INFO     | --------------------------------------------------
[2026-02-06 05:33:10] 2026-02-06 13:32:28,747 | INFO     | 
[2026-02-06 05:33:10] 2026-02-06 13:32:28,747 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 05:33:10] 2026-02-06 13:32:29,078 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,079 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,079 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,079 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,081 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 05:33:10] 2026-02-06 13:32:29,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,081 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 05:33:10] 2026-02-06 13:32:29,081 | INFO     | job 6996585355 has completed (purged errors)
[2026-02-06 05:33:10] 2026-02-06 13:32:29,081 | INFO     | overall cleanup function is called
[2026-02-06 05:33:10] 2026-02-06 13:32:30,089 | INFO     | --- collectZombieJob: --- 10, [2270517]
[2026-02-06 05:33:10] 2026-02-06 13:32:30,089 | INFO     | zombie collector waiting for pid 2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:30,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 05:33:10] 2026-02-06 13:32:30,090 | INFO     | collected zombie processes
[2026-02-06 05:33:10] 2026-02-06 13:32:30,090 | INFO     | will attempt to kill all subprocesses of pid=2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:31,254 | INFO     | process IDs to be killed: [2270517] (in reverse order)
[2026-02-06 05:33:10] 2026-02-06 13:32:31,383 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 05:33:10] 2026-02-06 13:32:31,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 05:33:10] 2026-02-06 13:32:31,397 | INFO     | did not find any defunct processes belonging to 2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:31,410 | INFO     | did not find any defunct processes belonging to 2270517
[2026-02-06 05:33:10] 2026-02-06 13:32:31,411 | INFO     | ready for new job
[2026-02-06 05:33:10] 2026-02-06 13:32:31,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 05:33:10] 2026-02-06 13:32:31,413 | INFO     | **************************************
[2026-02-06 05:33:10] 2026-02-06 13:32:31,413 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 05:33:10] 2026-02-06 13:32:31,413 | INFO     | **************************************
[2026-02-06 05:33:10] 2026-02-06 13:32:31,413 | INFO     | 
[2026-02-06 05:33:10] 2026-02-06 13:32:31,417 | INFO     | architecture information:
[2026-02-06 05:33:10] 2026-02-06 13:32:31,417 | INFO     | executing command: cat /etc/os-release
[2026-02-06 05:33:10] 2026-02-06 13:32:31,434 | INFO     | cat /etc/os-release:
[2026-02-06 05:33:10] NAME="CentOS Linux"
[2026-02-06 05:33:10] VERSION="7 (Core)"
[2026-02-06 05:33:10] ID="centos"
[2026-02-06 05:33:10] ID_LIKE="rhel fedora"
[2026-02-06 05:33:10] VERSION_ID="7"
[2026-02-06 05:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 05:33:10] ANSI_COLOR="0;31"
[2026-02-06 05:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 05:33:10] HOME_URL="https://www.centos.org/"
[2026-02-06 05:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 05:33:10] 
[2026-02-06 05:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 05:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 05:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 05:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 05:33:10] 
[2026-02-06 05:33:10] 2026-02-06 13:32:31,435 | INFO     | **************************************
[2026-02-06 05:33:10] 2026-02-06 13:32:31,944 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 05:33:10] 2026-02-06 13:32:31,964 | INFO     | sufficient remaining disk space (2124679217152 B)
[2026-02-06 05:33:10] 2026-02-06 13:32:31,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 05:33:10] 2026-02-06 13:32:31,965 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 05:33:10] 2026-02-06 13:32:31,965 | INFO     | update_server=False
[2026-02-06 05:33:10] 2026-02-06 13:32:31,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 05:33:10] 2026-02-06 13:32:32,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:33:10] 2026-02-06 13:32:32,223 | INFO     | aborting loop
[2026-02-06 05:33:10] 2026-02-06 13:32:32,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 05:33:10] 2026-02-06 13:32:32,562 | INFO     | all payload control threads have been joined
[2026-02-06 05:33:10] 2026-02-06 13:32:32,758 | INFO     | all data control threads have been joined
[2026-02-06 05:33:10] 2026-02-06 13:32:32,945 | INFO     | all job control threads have been joined
[2026-02-06 05:33:10] 2026-02-06 13:32:32,971 | INFO     | [job] retrieve thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:32,976 | INFO     | [data] copytool_in thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,030 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,229 | INFO     | [job] job monitor thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,575 | INFO     | [payload] control thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,678 | INFO     | [payload] failed_post thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,683 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,712 | INFO     | [job] validate thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 05:33:10] 2026-02-06 13:32:33,764 | INFO     | [data] control thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,779 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:33:10] 2026-02-06 13:32:33,951 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:33,952 | INFO     | [job] control thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:34,199 | INFO     | [payload] validate_post thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:34,315 | INFO     | [data] copytool_out thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:34,793 | INFO     | [job] queue monitor thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:32:37,770 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 05:33:10] 2026-02-06 13:33:01,123 | INFO     | PID=2265665 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 05:33:10] 2026-02-06 13:33:01,123 | INFO     | .. there are 34 such processes running
[2026-02-06 05:33:10] 2026-02-06 13:33:01,125 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 05:33:10] 2026-02-06 13:33:01,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 05:33:10] 2026-02-06 13:33:01,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 05:33:10] 2026-02-06 13:33:02,506 | INFO     | [monitor] cgroup control has ended
[2026-02-06 05:33:10] 2026-02-06 13:33:03,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746363656000)>', '<ExcThread(monitor, started 139745535448832)>']
[2026-02-06 05:33:10] 2026-02-06 13:33:04,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 05:33:10] 2026-02-06 13:33:04,148 | INFO     | [monitor] control thread has ended
[2026-02-06 05:33:10] 2026-02-06 13:33:08,810 | INFO     | all workflow threads have been joined
[2026-02-06 05:33:10] 2026-02-06 13:33:08,810 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 05:33:10] 2026-02-06 13:33:08,811 | INFO     | traces error code: 0
[2026-02-06 05:33:10] 2026-02-06 13:33:08,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 05:33:10] 2026-02-06 13:33:09,324 [wrapper] ==== pilot stdout END ====
[2026-02-06 05:33:10] 2026-02-06 13:33:09,356 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 05:33:10] 2026-02-06 13:33:09,387 [wrapper] pilotpid: 2265665
[2026-02-06 05:33:10] 2026-02-06 13:33:09,419 [wrapper] Pilot exit status: 0
[2026-02-06 05:33:10] 2026-02-06 13:33:09,557 [wrapper] pandaids: 6996585355
[2026-02-06 05:33:10] 2026-02-06 13:33:09,864 [wrapper] cleanup supervisor_pilot 2265671 2265666
[2026-02-06 05:33:10] 2026-02-06 13:33:09,883 [wrapper] Test setup, not cleaning
[2026-02-06 05:33:10] 2026-02-06 13:33:09,906 [wrapper] apfmon messages muted
[2026-02-06 05:33:10] 2026-02-06 13:33:09,971 [wrapper] ==== wrapper stdout END ====
[2026-02-06 05:33:10] 2026-02-06 13:33:10,000 [wrapper] ==== wrapper stderr END ====
[2026-02-06 05:33:10]  *** Error codes and diagnostics ***
[2026-02-06 05:33:10]     "exeErrorCode": 65,
[2026-02-06 05:33:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 05:33:10]     "pilotErrorCode": 1305,
[2026-02-06 05:33:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 05:33:10]  *** Listing of results directory ***
[2026-02-06 05:33:10] total 485076
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc    584627 Feb  6 01:13 pilot3.tar.gz
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc      5111 Feb  6 01:13 queuedata.json
[2026-02-06 05:33:10] -rwx------. 1 boinc boinc     36322 Feb  6 01:13 runpilot2-wrapper.sh
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc       100 Feb  6 05:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 05:33:10] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 05:26 run_atlas
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc       105 Feb  6 05:26 job.xml
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc      6594 Feb  6 05:26 init_data.xml
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc 492551389 Feb  6 05:26 EVNT.48310747._000103.pool.root.1
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc     15845 Feb  6 05:26 start_atlas.sh
[2026-02-06 05:33:10] drwxrwx--x. 2 boinc boinc      4096 Feb  6 05:26 shared
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc    597948 Feb  6 05:26 input.tar.gz
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc         0 Feb  6 05:26 boinc_lockfile
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc      2522 Feb  6 05:26 pandaJob.out
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc   1009504 Feb  6 05:27 agis_schedconf.cvmfs.json
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc   1513144 Feb  6 05:27 agis_ddmendpoints.agis.ALL.json
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc       439 Feb  6 05:28 workernode_map.json
[2026-02-06 05:33:10] drwx------. 5 boinc boinc      4096 Feb  6 05:28 pilot3
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc       525 Feb  6 05:30 boinc_task_state.xml
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc       950 Feb  6 05:30 memory_monitor_summary.json
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc     22337 Feb  6 05:30 log.48310749._005229.job.log.tgz.1
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc      7002 Feb  6 05:32 heartbeat.json
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc      8192 Feb  6 05:32 boinc_mmap_file
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc        23 Feb  6 05:32 wrapper_checkpoint.txt
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc        95 Feb  6 05:33 pilot_heartbeat.json
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc      4819 Feb  6 05:33 pilotlog.txt
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc     90872 Feb  6 05:33 log.48310749._005229.job.log.1
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc       188 Feb  6 05:33 output.list
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc       620 Feb  6 05:33 runtime_log
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc    133120 Feb  6 05:33 result.tar.gz
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc      8635 Feb  6 05:33 runtime_log.err
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc       644 Feb  6 05:33 LbFMDmb5W88n9Rq4apOajLDm4fhM0noT9bVooX4SDmHCYKDmcJUQLo.diag
[2026-02-06 05:33:10] -rw-r--r--. 1 boinc boinc     21781 Feb  6 05:33 stderr.txt
[2026-02-06 05:33:10] No HITS result produced
[2026-02-06 05:33:10]  *** Contents of shared directory: ***
[2026-02-06 05:33:10] total 481744
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc 492551389 Feb  6 05:26 ATLAS.root_0
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc     15845 Feb  6 05:26 start_atlas.sh
[2026-02-06 05:33:10] -rw-r--r--. 2 boinc boinc    597948 Feb  6 05:26 input.tar.gz
[2026-02-06 05:33:10] -rw-------. 1 boinc boinc    133120 Feb  6 05:33 result.tar.gz
05:33:12 (2261836): run_atlas exited; CPU time 37.272408
05:33:12 (2261836): called boinc_finish(0)

</stderr_txt>
]]>

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