Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:16:31 (4588): wrapper (7.7.26015): starting
04:16:31 (4588): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 04:16:31] Arguments: --nthreads 8
[2026-02-06 04:16:31] Threads: 8
[2026-02-06 04:16:31] Checking for CVMFS
[2026-02-06 04:16:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 04:16:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 04:16:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 04:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 04:16:32] 2.11.2.0 2701 163887 89716 155934 3 50 14837552 20275201 1 130560 0 40593269 99.882 8302512 28555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 04:16:32] CVMFS is ok
[2026-02-06 04:16:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 04:16:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 04:16:32] Further information can be found at the LHC@home message board.
[2026-02-06 04:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 04:16:32] Checking for apptainer binary...
[2026-02-06 04:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 04:16:32] Running /usr/bin/apptainer --version
[2026-02-06 04:16:32] apptainer version 1.3.2-1.el7
[2026-02-06 04:16:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 04:16:33] c-204-1.aglt2.org
[2026-02-06 04:16:33] apptainer works
[2026-02-06 04:16:33] Set ATHENA_PROC_NUMBER=8
[2026-02-06 04:16:33] Set ATHENA_CORE_NUMBER=8
[2026-02-06 04:16:33] Starting ATLAS job with PandaID=6996408413
[2026-02-06 04:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 07:06:21]  *** The last 200 lines of the pilot log: ***
[2026-02-06 07:06:21] 2026-02-06 12:05:33,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,443 | INFO     | log transfer has been attempted: DONE
[2026-02-06 07:06:21] 2026-02-06 12:05:33,443 | INFO     | job 6996408413 has finished - writing final server update
[2026-02-06 07:06:21] 2026-02-06 12:05:33,444 | INFO     | total number of processed events: 400 (read)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,446 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996408413/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,447 | INFO     | extracted standard info from prmon json
[2026-02-06 07:06:21] 2026-02-06 12:05:33,447 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 07:06:21] 2026-02-06 12:05:33,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 07:06:21] 2026-02-06 12:05:33,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 07:06:21] 2026-02-06 12:05:33,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 07:06:21] 2026-02-06 12:05:33,451 | INFO     | fitting pss+swap vs Time
[2026-02-06 07:06:21] 2026-02-06 12:05:33,451 | INFO     | sum of square deviations: 1418361477.5
[2026-02-06 07:06:21] 2026-02-06 12:05:33,452 | INFO     | sum of deviations: -7719820534.999996
[2026-02-06 07:06:21] 2026-02-06 12:05:33,452 | INFO     | mean x: 1770374476.5
[2026-02-06 07:06:21] 2026-02-06 12:05:33,452 | INFO     | mean y: 2556519.361445783
[2026-02-06 07:06:21] 2026-02-06 12:05:33,452 | INFO     | intersect: 9638304144.44073
[2026-02-06 07:06:21] 2026-02-06 12:05:33,453 | INFO     | chi2: 2.369865765853106
[2026-02-06 07:06:21] 2026-02-06 12:05:33,453 | INFO     | sum of square deviations: 1294014960.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,454 | INFO     | sum of deviations: 3695476807.0000005
[2026-02-06 07:06:21] 2026-02-06 12:05:33,454 | INFO     | mean x: 1770374324.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,454 | INFO     | mean y: 2570183.298136646
[2026-02-06 07:06:21] 2026-02-06 12:05:33,454 | INFO     | intersect: -5053304328.423354
[2026-02-06 07:06:21] 2026-02-06 12:05:33,455 | INFO     | chi2: 1.6055689182065787
[2026-02-06 07:06:21] 2026-02-06 12:05:33,455 | INFO     | current chi2=1.6055689182065787 (change=32.25063877706151 %)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,455 | INFO     | sum of square deviations: 1177156955.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,456 | INFO     | sum of deviations: 3673509059.9999948
[2026-02-06 07:06:21] 2026-02-06 12:05:33,456 | INFO     | mean x: 1770374171.5
[2026-02-06 07:06:21] 2026-02-06 12:05:33,456 | INFO     | mean y: 2570154.6025641025
[2026-02-06 07:06:21] 2026-02-06 12:05:33,456 | INFO     | intersect: -5522169372.247732
[2026-02-06 07:06:21] 2026-02-06 12:05:33,456 | INFO     | chi2: 1.606417866420612
[2026-02-06 07:06:21] 2026-02-06 12:05:33,457 | INFO     | current chi2=1.606417866420612 (change=-0.05287522724228663 %)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,457 | INFO     | right removable region: 155
[2026-02-06 07:06:21] 2026-02-06 12:05:33,457 | INFO     | sum of square deviations: 1294014960.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,458 | INFO     | sum of deviations: -33171804819.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,458 | INFO     | mean x: 1770374629.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,458 | INFO     | mean y: 2587303.9316770188
[2026-02-06 07:06:21] 2026-02-06 12:05:33,458 | INFO     | intersect: 45385773329.61529
[2026-02-06 07:06:21] 2026-02-06 12:05:33,458 | INFO     | chi2: 0.9342745217730712
[2026-02-06 07:06:21] 2026-02-06 12:05:33,459 | INFO     | current chi2=0.9342745217730712 (change=60.57690122221964 %)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,459 | INFO     | sum of square deviations: 1177156955.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | sum of deviations: -30679913369.5
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | mean x: 1770374781.5
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | mean y: 2583990.903846154
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | intersect: 46143368104.07038
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | chi2: 0.9225057800381882
[2026-02-06 07:06:21] 2026-02-06 12:05:33,460 | INFO     | current chi2=0.9225057800381882 (change=1.2596663465196813 %)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,461 | INFO     | left removable region: 20
[2026-02-06 07:06:21] 2026-02-06 12:05:33,461 | INFO     | sum of square deviations: 762879420.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,461 | INFO     | sum of deviations: -9116884075.999998
[2026-02-06 07:06:21] 2026-02-06 12:05:33,462 | INFO     | mean x: 1770374751.0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,462 | INFO     | mean y: 2584892.888888889
[2026-02-06 07:06:21] 2026-02-06 12:05:33,462 | INFO     | intersect: 21159665491.47728
[2026-02-06 07:06:21] 2026-02-06 12:05:33,462 | INFO     | chi2: 0.09364651681099026
[2026-02-06 07:06:21] 2026-02-06 12:05:33,462 | INFO     | current memory leak: -11.95 B/s (using 135 data points, chi2=0.09)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | could have reported an average CPU frequency of 1779 MHz (9 samples)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | ..............................
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | . Timing measurements:
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | . get job = 0 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | . initial setup = 8 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | . payload setup = 8 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,463 | INFO     | . stage-in = 0 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,464 | INFO     | . payload execution = 10088 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,464 | INFO     | . stage-out = 1 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,464 | INFO     | . log creation = 0 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,464 | INFO     | ..............................
[2026-02-06 07:06:21] 2026-02-06 12:05:33,547 | INFO     | 
[2026-02-06 07:06:21] 2026-02-06 12:05:33,547 | INFO     | job summary report
[2026-02-06 07:06:21] 2026-02-06 12:05:33,547 | INFO     | --------------------------------------------------
[2026-02-06 07:06:21] 2026-02-06 12:05:33,548 | INFO     | PanDA job id: 6996408413
[2026-02-06 07:06:21] 2026-02-06 12:05:33,548 | INFO     | task id: 48431113
[2026-02-06 07:06:21] 2026-02-06 12:05:33,548 | INFO     | errors: (none)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 07:06:21] 2026-02-06 12:05:33,548 | INFO     | pilot state: finished 
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | transexitcode: 0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | exeerrorcode: 0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | exeerrordiag: 
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | exitcode: 0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | exitmsg: OK
[2026-02-06 07:06:21] 2026-02-06 12:05:33,549 | INFO     | cpuconsumptiontime: 76507 s
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | nevents: 400
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | neventsw: 0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | pid: 13127
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | pgrp: 13127
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | corecount: 8
[2026-02-06 07:06:21] 2026-02-06 12:05:33,550 | INFO     | event service: False
[2026-02-06 07:06:21] 2026-02-06 12:05:33,551 | INFO     | sizes: {0: 2282911, 1: 2283117, 11: 2283145, 10100: 2311794, 10102: 2320792, 10103: 2320848, 10104: 2321234}
[2026-02-06 07:06:21] 2026-02-06 12:05:33,551 | INFO     | --------------------------------------------------
[2026-02-06 07:06:21] 2026-02-06 12:05:33,551 | INFO     | 
[2026-02-06 07:06:21] 2026-02-06 12:05:33,551 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 07:06:21] 2026-02-06 12:05:33,578 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,579 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,579 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,579 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,581 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,582 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,582 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 07:06:21] 2026-02-06 12:05:33,582 | INFO     | job 6996408413 has completed (purged errors)
[2026-02-06 07:06:21] 2026-02-06 12:05:33,583 | INFO     | overall cleanup function is called
[2026-02-06 07:06:21] 2026-02-06 12:05:34,016 | INFO     | PID=8567 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-06 07:06:21] 2026-02-06 12:05:34,591 | INFO     | --- collectZombieJob: --- 10, [13127]
[2026-02-06 07:06:21] 2026-02-06 12:05:34,591 | INFO     | zombie collector waiting for pid 13127
[2026-02-06 07:06:21] 2026-02-06 12:05:34,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 07:06:21] 2026-02-06 12:05:34,592 | INFO     | collected zombie processes
[2026-02-06 07:06:21] 2026-02-06 12:05:34,592 | INFO     | will attempt to kill all subprocesses of pid=13127
[2026-02-06 07:06:21] 2026-02-06 12:05:34,661 | INFO     | process IDs to be killed: [13127] (in reverse order)
[2026-02-06 07:06:21] 2026-02-06 12:05:34,716 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 07:06:21] 2026-02-06 12:05:34,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 07:06:21] 2026-02-06 12:05:34,720 | INFO     | did not find any defunct processes belonging to 13127
[2026-02-06 07:06:21] 2026-02-06 12:05:34,724 | INFO     | did not find any defunct processes belonging to 13127
[2026-02-06 07:06:21] 2026-02-06 12:05:34,724 | INFO     | ready for new job
[2026-02-06 07:06:21] 2026-02-06 12:05:34,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 07:06:21] 2026-02-06 12:05:34,726 | INFO     | **************************************
[2026-02-06 07:06:21] 2026-02-06 12:05:34,726 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 07:06:21] 2026-02-06 12:05:34,727 | INFO     | **************************************
[2026-02-06 07:06:21] 2026-02-06 12:05:34,727 | INFO     | 
[2026-02-06 07:06:21] 2026-02-06 12:05:34,727 | INFO     | architecture information:
[2026-02-06 07:06:21] 2026-02-06 12:05:34,728 | INFO     | executing command: cat /etc/os-release
[2026-02-06 07:06:21] 2026-02-06 12:05:34,746 | INFO     | cat /etc/os-release:
[2026-02-06 07:06:21] NAME="CentOS Linux"
[2026-02-06 07:06:21] VERSION="7 (Core)"
[2026-02-06 07:06:21] ID="centos"
[2026-02-06 07:06:21] ID_LIKE="rhel fedora"
[2026-02-06 07:06:21] VERSION_ID="7"
[2026-02-06 07:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 07:06:21] ANSI_COLOR="0;31"
[2026-02-06 07:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 07:06:21] HOME_URL="https://www.centos.org/"
[2026-02-06 07:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 07:06:21] 
[2026-02-06 07:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 07:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 07:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 07:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 07:06:21] 
[2026-02-06 07:06:21] 2026-02-06 12:05:34,746 | INFO     | **************************************
[2026-02-06 07:06:21] 2026-02-06 12:05:35,249 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 07:06:21] 2026-02-06 12:05:35,269 | INFO     | sufficient remaining disk space (17631805440 B)
[2026-02-06 07:06:21] 2026-02-06 12:05:35,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 07:06:21] 2026-02-06 12:05:35,270 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 07:06:21] 2026-02-06 12:05:35,270 | INFO     | update_server=False
[2026-02-06 07:06:21] 2026-02-06 12:05:35,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 07:06:21] 2026-02-06 12:05:35,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 07:06:21] 2026-02-06 12:05:35,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 07:06:21] 2026-02-06 12:05:35,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 07:06:21] 2026-02-06 12:05:35,327 | INFO     | all payload control threads have been joined
[2026-02-06 07:06:21] 2026-02-06 12:05:35,344 | INFO     | all job control threads have been joined
[2026-02-06 07:06:21] 2026-02-06 12:05:35,626 | INFO     | all data control threads have been joined
[2026-02-06 07:06:21] 2026-02-06 12:05:36,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 07:06:21] 2026-02-06 12:05:36,203 | INFO     | aborting loop
[2026-02-06 07:06:21] 2026-02-06 12:05:36,276 | INFO     | [job] retrieve thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,277 | INFO     | [job] queue monitor thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,278 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,333 | INFO     | [payload] control thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,336 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,349 | INFO     | [job] control thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,632 | INFO     | [data] control thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,803 | INFO     | [payload] failed_post thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,840 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:36,952 | INFO     | [job] validate thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:37,209 | INFO     | [job] job monitor thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:37,230 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:37,276 | INFO     | [data] copytool_out thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:37,365 | INFO     | [payload] validate_post thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:37,623 | INFO     | [data] copytool_in thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:05:39,278 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 07:06:21] 2026-02-06 12:06:06,222 | INFO     | PID=8567 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-06 07:06:21] 2026-02-06 12:06:06,224 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 07:06:21] 2026-02-06 12:06:06,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 07:06:21] 2026-02-06 12:06:06,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 07:06:21] 2026-02-06 12:06:14,413 | INFO     | [monitor] cgroup control has ended
[2026-02-06 07:06:21] 2026-02-06 12:06:15,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809625704256)>', '<ExcThread(monitor, started 139808852645632)>']
[2026-02-06 07:06:21] 2026-02-06 12:06:16,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 07:06:21] 2026-02-06 12:06:16,268 | INFO     | [monitor] control thread has ended
[2026-02-06 07:06:21] 2026-02-06 12:06:20,809 | INFO     | all workflow threads have been joined
[2026-02-06 07:06:21] 2026-02-06 12:06:20,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 07:06:21] 2026-02-06 12:06:20,810 | INFO     | traces error code: 0
[2026-02-06 07:06:21] 2026-02-06 12:06:20,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 07:06:21] 2026-02-06 12:06:20,931 [wrapper] ==== pilot stdout END ====
[2026-02-06 07:06:21] 2026-02-06 12:06:20,936 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 07:06:21] 2026-02-06 12:06:20,941 [wrapper] pilotpid: 8567
[2026-02-06 07:06:21] 2026-02-06 12:06:20,946 [wrapper] Pilot exit status: 0
[2026-02-06 07:06:21] 2026-02-06 12:06:20,965 [wrapper] pandaids: 6996408413
[2026-02-06 07:06:21] 2026-02-06 12:06:21,010 [wrapper] cleanup supervisor_pilot 14186 8568
[2026-02-06 07:06:21] 2026-02-06 12:06:21,016 [wrapper] Test setup, not cleaning
[2026-02-06 07:06:21] 2026-02-06 12:06:21,020 [wrapper] apfmon messages muted
[2026-02-06 07:06:21] 2026-02-06 12:06:21,025 [wrapper] ==== wrapper stdout END ====
[2026-02-06 07:06:21] 2026-02-06 12:06:21,030 [wrapper] ==== wrapper stderr END ====
[2026-02-06 07:06:21]  *** Error codes and diagnostics ***
[2026-02-06 07:06:21]     "exeErrorCode": 0,
[2026-02-06 07:06:21]     "exeErrorDiag": "",
[2026-02-06 07:06:21]     "pilotErrorCode": 0,
[2026-02-06 07:06:21]     "pilotErrorDiag": "",
[2026-02-06 07:06:21]  *** Listing of results directory ***
[2026-02-06 07:06:21] total 897428
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer    584627 Feb  6 00:55 pilot3.tar.gz
[2026-02-06 07:06:21] -rwx------ 1 boincer boincer     36322 Feb  6 00:55 runpilot2-wrapper.sh
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer      5111 Feb  6 00:56 queuedata.json
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer       100 Feb  6 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 07:06:21] -rwxr-xr-x 1 boincer boincer      7986 Feb  6 04:16 run_atlas
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer       105 Feb  6 04:16 job.xml
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer 648350501 Feb  6 04:16 EVNT.48431111._000046.pool.root.1
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer     15845 Feb  6 04:16 start_atlas.sh
[2026-02-06 07:06:21] drwxrwx--x 2 boincer boincer      4096 Feb  6 04:16 shared
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer    597954 Feb  6 04:16 input.tar.gz
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer         0 Feb  6 04:16 boinc_lockfile
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer      2544 Feb  6 04:16 pandaJob.out
[2026-02-06 07:06:21] -rw------- 1 boincer boincer        57 Feb  6 04:16 setup.sh.local
[2026-02-06 07:06:21] -rw------- 1 boincer boincer   1007453 Feb  6 04:16 agis_schedconf.cvmfs.json
[2026-02-06 07:06:21] -rw------- 1 boincer boincer   1513144 Feb  6 04:16 agis_ddmendpoints.agis.ALL.json
[2026-02-06 07:06:21] -rw------- 1 boincer boincer       430 Feb  6 04:16 workernode_map.json
[2026-02-06 07:06:21] drwx------ 5 boincer boincer      4096 Feb  6 04:16 pilot3
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer      5909 Feb  6 07:02 init_data.xml
[2026-02-06 07:06:21] -rw------- 1 boincer boincer 262992071 Feb  6 07:04 HITS.48431113._002279.pool.root.1
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer       532 Feb  6 07:05 boinc_task_state.xml
[2026-02-06 07:06:21] -rw------- 1 boincer boincer      1055 Feb  6 07:05 memory_monitor_summary.json
[2026-02-06 07:06:21] -rw------- 1 boincer boincer    423320 Feb  6 07:05 log.48431113._002279.job.log.tgz.1
[2026-02-06 07:06:21] -rw------- 1 boincer boincer      6408 Feb  6 07:05 heartbeat.json
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer      8192 Feb  6 07:05 boinc_mmap_file
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer        28 Feb  6 07:05 wrapper_checkpoint.txt
[2026-02-06 07:06:21] -rw------- 1 boincer boincer        95 Feb  6 07:06 pilot_heartbeat.json
[2026-02-06 07:06:21] -rw------- 1 boincer boincer      4741 Feb  6 07:06 pilotlog.txt
[2026-02-06 07:06:21] -rw------- 1 boincer boincer   1417519 Feb  6 07:06 log.48431113._002279.job.log.1
[2026-02-06 07:06:21] -rw------- 1 boincer boincer       357 Feb  6 07:06 output.list
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer       620 Feb  6 07:06 runtime_log
[2026-02-06 07:06:21] -rw------- 1 boincer boincer   1853440 Feb  6 07:06 result.tar.gz
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer      9337 Feb  6 07:06 runtime_log.err
[2026-02-06 07:06:21] -rw------- 1 boincer boincer       661 Feb  6 07:06 7sxMDmyzT88n9Rq4apOajLDm4fhM0noT9bVooX4SDmhjXKDmC2VQKo.diag
[2026-02-06 07:06:21] -rw-r--r-- 1 boincer boincer     21153 Feb  6 07:06 stderr.txt
[2026-02-06 07:06:21] HITS file was successfully produced:
[2026-02-06 07:06:21] -rw------- 1 boincer boincer 262992071 Feb  6 07:04 shared/HITS.pool.root.1
[2026-02-06 07:06:21]  *** Contents of shared directory: ***
[2026-02-06 07:06:21] total 892408
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer 648350501 Feb  6 04:16 ATLAS.root_0
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer     15845 Feb  6 04:16 start_atlas.sh
[2026-02-06 07:06:21] -rw-r--r-- 2 boincer boincer    597954 Feb  6 04:16 input.tar.gz
[2026-02-06 07:06:21] -rw------- 1 boincer boincer 262992071 Feb  6 07:04 HITS.pool.root.1
[2026-02-06 07:06:21] -rw------- 1 boincer boincer   1853440 Feb  6 07:06 result.tar.gz
07:06:23 (4588): run_atlas exited; CPU time 76424.683470
07:06:23 (4588): called boinc_finish(0)

</stderr_txt>
]]>

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