Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:03:29 (1644330): wrapper (7.7.26015): starting
04:03:29 (1644330): wrapper: running run_atlas (--nthreads 11)
[2026-02-06 04:03:29] Arguments: --nthreads 11
[2026-02-06 04:03:29] Threads: 11
[2026-02-06 04:03:29] Checking for CVMFS
[2026-02-06 04:03:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 04:03:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 04:03:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 04:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 04:03:30] 2.13.3.0 270452 21025 228532 155934 0 188 30766250 40960000 3285 16776704 0 22410096 99.765 26220788 39932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-06 04:03:30] CVMFS is ok
[2026-02-06 04:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 04:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 04:03:30] Further information can be found at the LHC@home message board.
[2026-02-06 04:03:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 04:03:30] Checking for apptainer binary...
[2026-02-06 04:03:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 04:03:30] Running /usr/bin/apptainer --version
[2026-02-06 04:03:30] apptainer version 1.4.5-2.el9
[2026-02-06 04:03:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 04:03:30] c6-6-39-1.aglt2.org
[2026-02-06 04:03:30] apptainer works
[2026-02-06 04:03:30] Set ATHENA_PROC_NUMBER=11
[2026-02-06 04:03:30] Set ATHENA_CORE_NUMBER=11
[2026-02-06 04:03:30] Starting ATLAS job with PandaID=6996351007
[2026-02-06 04:03:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 05:04:00]  *** The last 200 lines of the pilot log: ***
[2026-02-06 05:04:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-06 05:04:00]  is_altstaged=None
[2026-02-06 05:04:00]  is_tar=False
[2026-02-06 05:04:00]  lfn=log.48442098._002823.job.log.tgz.1
[2026-02-06 05:04:00]  mtime=0
[2026-02-06 05:04:00]  protocol_id=None
[2026-02-06 05:04:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-06 05:04:00]  replicas=None
[2026-02-06 05:04:00]  scope=mc23_13p6TeV
[2026-02-06 05:04:00]  status=None
[2026-02-06 05:04:00]  status_code=0
[2026-02-06 05:04:00]  storage_token=
[2026-02-06 05:04:00]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6996351007/log.48442098._002823.job.log.tgz.1
[2026-02-06 05:04:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/cf/log.48442098._002823.job.log.tgz.1
[2026-02-06 05:04:00]  workdir=None
[2026-02-06 05:04:00] ]
[2026-02-06 05:04:00] 2026-02-06 10:03:25,544 | INFO     | transferring file log.48442098._002823.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6996351007/log.48442098._002823.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-06 05:04:00] 2026-02-06 10:03:25,545 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6996351007/log.48442098._002823.job.log.tgz.1 /tmp/boinchome/slots/3/log.48442098._002823.job
[2026-02-06 05:04:00] 2026-02-06 10:03:25,557 | INFO     | adding to output.list: log.48442098._002823.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/cf/log.48442098._002823.job.log.tg
[2026-02-06 05:04:00] 2026-02-06 10:03:25,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-06 05:04:00] 2026-02-06 10:03:25,557 | INFO     | summary of transferred files:
[2026-02-06 05:04:00] 2026-02-06 10:03:25,557 | INFO     |  -- lfn=log.48442098._002823.job.log.tgz.1, status_code=0, status=transferred
[2026-02-06 05:04:00] 2026-02-06 10:03:25,558 | INFO     | stage-out finished correctly
[2026-02-06 05:04:00] 2026-02-06 10:03:25,680 | INFO     | number of running child processes to parent process 1653079: 1
[2026-02-06 05:04:00] 2026-02-06 10:03:25,680 | INFO     | maximum number of monitored processes: 6
[2026-02-06 05:04:00] 2026-02-06 10:03:26,089 | INFO     | PID=1648047 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 05:04:00] 2026-02-06 10:03:26,089 | INFO     | .. there are 4 such processes running
[2026-02-06 05:04:00] 2026-02-06 10:03:26,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-06 05:04:00] 2026-02-06 10:03:27,090 | INFO     | time since job start (3585s) is within the limit (349056.0s)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,076 | INFO     | job 6996351007 has state=finished
[2026-02-06 05:04:00] 2026-02-06 10:03:28,076 | INFO     | preparing for final server update for job 6996351007 in state='finished'
[2026-02-06 05:04:00] 2026-02-06 10:03:28,076 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6996351007/jobReport.json
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | this job has now completed (state=finished)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | log transfer has been attempted: DONE
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | job 6996351007 has finished - writing final server update
[2026-02-06 05:04:00] 2026-02-06 10:03:28,078 | INFO     | total number of processed events: 400 (read)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,083 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6996351007/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,084 | INFO     | extracted standard info from prmon json
[2026-02-06 05:04:00] 2026-02-06 10:03:28,084 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 05:04:00] 2026-02-06 10:03:28,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:04:00] 2026-02-06 10:03:28,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:04:00] 2026-02-06 10:03:28,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | fitting pss+swap vs Time
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | sum of square deviations: 43584073.0
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | sum of deviations: -1101579876.5
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | mean x: 1770370502.5
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | mean y: 2716993.4423076925
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | intersect: 44748524011.138725
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | chi2: 0.00872403677549352
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | current memory leak: -25.27 B/s (using 52 data points, chi2=0.01)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | could have reported an average CPU frequency of 3234 MHz (5 samples)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | ..............................
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | . Timing measurements:
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | . get job = 0 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | . initial setup = 6 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | . payload setup = 4 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,085 | INFO     | . stage-in = 0 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,086 | INFO     | . payload execution = 3562 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,086 | INFO     | . stage-out = 0 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,086 | INFO     | . log creation = 0 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,086 | INFO     | ..............................
[2026-02-06 05:04:00] 2026-02-06 10:03:28,126 | INFO     | 
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | job summary report
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | --------------------------------------------------
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | PanDA job id: 6996351007
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | task id: 48442098
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | errors: (none)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | pilot state: finished 
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | transexitcode: 0
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | exeerrorcode: 0
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | exeerrordiag: 
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | exitcode: 0
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | exitmsg: OK
[2026-02-06 05:04:00] 2026-02-06 10:03:28,127 | INFO     | cpuconsumptiontime: 35862 s
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | nevents: 400
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | neventsw: 0
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | pid: 1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | pgrp: 1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | corecount: 11
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | event service: False
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | sizes: {0: 2282660, 1: 2283121, 11: 2283121, 3570: 2308819, 3572: 2317817, 3573: 2317873, 3574: 2318227}
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | --------------------------------------------------
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | 
[2026-02-06 05:04:00] 2026-02-06 10:03:28,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-06 05:04:00] 2026-02-06 10:03:28,142 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,143 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,144 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 05:04:00] 2026-02-06 10:03:28,144 | INFO     | job 6996351007 has completed (purged errors)
[2026-02-06 05:04:00] 2026-02-06 10:03:28,144 | INFO     | overall cleanup function is called
[2026-02-06 05:04:00] 2026-02-06 10:03:29,151 | INFO     | --- collectZombieJob: --- 10, [1653079]
[2026-02-06 05:04:00] 2026-02-06 10:03:29,151 | INFO     | zombie collector waiting for pid 1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:29,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 05:04:00] 2026-02-06 10:03:29,151 | INFO     | collected zombie processes
[2026-02-06 05:04:00] 2026-02-06 10:03:29,151 | INFO     | will attempt to kill all subprocesses of pid=1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:29,290 | INFO     | process IDs to be killed: [1653079] (in reverse order)
[2026-02-06 05:04:00] 2026-02-06 10:03:29,342 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 05:04:00] 2026-02-06 10:03:29,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 05:04:00] 2026-02-06 10:03:29,350 | INFO     | did not find any defunct processes belonging to 1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:29,358 | INFO     | did not find any defunct processes belonging to 1653079
[2026-02-06 05:04:00] 2026-02-06 10:03:29,358 | INFO     | ready for new job
[2026-02-06 05:04:00] 2026-02-06 10:03:29,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 05:04:00] 2026-02-06 10:03:29,359 | INFO     | **************************************
[2026-02-06 05:04:00] 2026-02-06 10:03:29,360 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 05:04:00] 2026-02-06 10:03:29,360 | INFO     | **************************************
[2026-02-06 05:04:00] 2026-02-06 10:03:29,360 | INFO     | 
[2026-02-06 05:04:00] 2026-02-06 10:03:29,362 | INFO     | architecture information:
[2026-02-06 05:04:00] 2026-02-06 10:03:29,363 | INFO     | executing command: cat /etc/os-release
[2026-02-06 05:04:00] 2026-02-06 10:03:29,373 | INFO     | cat /etc/os-release:
[2026-02-06 05:04:00] NAME="CentOS Linux"
[2026-02-06 05:04:00] VERSION="7 (Core)"
[2026-02-06 05:04:00] ID="centos"
[2026-02-06 05:04:00] ID_LIKE="rhel fedora"
[2026-02-06 05:04:00] VERSION_ID="7"
[2026-02-06 05:04:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 05:04:00] ANSI_COLOR="0;31"
[2026-02-06 05:04:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 05:04:00] HOME_URL="https://www.centos.org/"
[2026-02-06 05:04:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 05:04:00] 
[2026-02-06 05:04:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 05:04:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 05:04:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 05:04:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 05:04:00] 
[2026-02-06 05:04:00] 2026-02-06 10:03:29,373 | INFO     | **************************************
[2026-02-06 05:04:00] 2026-02-06 10:03:29,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-06 05:04:00] 2026-02-06 10:03:29,886 | INFO     | sufficient remaining disk space (69195530240 B)
[2026-02-06 05:04:00] 2026-02-06 10:03:29,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 05:04:00] 2026-02-06 10:03:29,887 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 05:04:00] 2026-02-06 10:03:29,887 | INFO     | update_server=False
[2026-02-06 05:04:00] 2026-02-06 10:03:29,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 05:04:00] 2026-02-06 10:03:29,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:04:00] 2026-02-06 10:03:29,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:04:00] 2026-02-06 10:03:29,888 | INFO     | aborting loop
[2026-02-06 05:04:00] 2026-02-06 10:03:30,151 | INFO     | all data control threads have been joined
[2026-02-06 05:04:00] 2026-02-06 10:03:30,889 | INFO     | [job] job monitor thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:30,893 | INFO     | [job] retrieve thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:30,893 | INFO     | [job] queue monitor thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 05:04:00] 2026-02-06 10:03:31,156 | INFO     | [data] control thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,245 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,257 | INFO     | [payload] validate_post thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,269 | INFO     | all job control threads have been joined
[2026-02-06 05:04:00] 2026-02-06 10:03:31,333 | INFO     | [job] validate thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,355 | INFO     | all payload control threads have been joined
[2026-02-06 05:04:00] 2026-02-06 10:03:31,480 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:31,885 | INFO     | [data] copytool_in thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:32,274 | INFO     | [job] control thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:32,294 | INFO     | [payload] failed_post thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:32,310 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:32,356 | INFO     | [payload] control thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:32,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 05:04:00] 2026-02-06 10:03:33,122 | INFO     | [data] copytool_out thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:35,834 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-02-06 05:04:00] 2026-02-06 10:03:36,757 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:40,287 | INFO     | job.realtimelogging is not enabled
[2026-02-06 05:04:00] 2026-02-06 10:03:41,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 05:04:00] 2026-02-06 10:03:47,661 | INFO     | [monitor] cgroup control has ended
[2026-02-06 05:04:00] 2026-02-06 10:03:49,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109368420160)>', '<ExcThread(monitor, started 140108971878144)>']
[2026-02-06 05:04:00] 2026-02-06 10:03:54,136 | INFO     | all workflow threads have been joined
[2026-02-06 05:04:00] 2026-02-06 10:03:54,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 05:04:00] 2026-02-06 10:03:54,136 | INFO     | traces error code: 0
[2026-02-06 05:04:00] 2026-02-06 10:03:54,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 05:04:00] 2026-02-06 10:04:00,404 | INFO     | PID=1648047 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 05:04:00] 2026-02-06 10:04:00,404 | INFO     | .. there are 5 such processes running
[2026-02-06 05:04:00] 2026-02-06 10:04:00,405 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 05:04:00] 2026-02-06 10:04:00,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 05:04:00] 2026-02-06 10:04:00,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 05:04:00] 2026-02-06 10:04:00,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 05:04:00] 2026-02-06 10:04:00,405 | INFO     | [monitor] control thread has ended
[2026-02-06 05:04:00] 2026-02-06 10:04:00,558 [wrapper] ==== pilot stdout END ====
[2026-02-06 05:04:00] 2026-02-06 10:04:00,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 05:04:00] 2026-02-06 10:04:00,562 [wrapper] pilotpid: 1648047
[2026-02-06 05:04:00] 2026-02-06 10:04:00,564 [wrapper] Pilot exit status: 0
[2026-02-06 05:04:00] 2026-02-06 10:04:00,571 [wrapper] pandaids: 6996351007
[2026-02-06 05:04:00] 2026-02-06 10:04:00,609 [wrapper] cleanup supervisor_pilot 1811623 1648048
[2026-02-06 05:04:00] 2026-02-06 10:04:00,611 [wrapper] Test setup, not cleaning
[2026-02-06 05:04:00] 2026-02-06 10:04:00,613 [wrapper] apfmon messages muted
[2026-02-06 05:04:00] 2026-02-06 10:04:00,614 [wrapper] ==== wrapper stdout END ====
[2026-02-06 05:04:00] 2026-02-06 10:04:00,616 [wrapper] ==== wrapper stderr END ====
[2026-02-06 05:04:00]  *** Error codes and diagnostics ***
[2026-02-06 05:04:00]     "exeErrorCode": 0,
[2026-02-06 05:04:00]     "exeErrorDiag": "",
[2026-02-06 05:04:00]     "pilotErrorCode": 0,
[2026-02-06 05:04:00]     "pilotErrorDiag": "",
[2026-02-06 05:04:00]  *** Listing of results directory ***
[2026-02-06 05:04:00] total 664888
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas    584627 Feb  5 23:58 pilot3.tar.gz
[2026-02-06 05:04:00] -rwx------. 1 boincer umatlas     36322 Feb  6 00:11 runpilot2-wrapper.sh
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 00:15 queuedata.json
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas       100 Feb  6 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 05:04:00] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 04:03 run_atlas
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas       105 Feb  6 04:03 job.xml
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas 493276920 Feb  6 04:03 EVNT.48442096._000057.pool.root.1
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 04:03 start_atlas.sh
[2026-02-06 05:04:00] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 04:03 shared
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas    597953 Feb  6 04:03 input.tar.gz
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas         0 Feb  6 04:03 boinc_lockfile
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas      2528 Feb  6 04:03 pandaJob.out
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas        57 Feb  6 04:03 setup.sh.local
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas   1007453 Feb  6 04:03 agis_schedconf.cvmfs.json
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas   1513144 Feb  6 04:03 agis_ddmendpoints.agis.ALL.json
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas       442 Feb  6 04:03 workernode_map.json
[2026-02-06 05:04:00] drwx------. 5 boincer umatlas      4096 Feb  6 04:03 pilot3
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas      6843 Feb  6 05:00 init_data.xml
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas 181800672 Feb  6 05:02 HITS.48442098._002823.pool.root.1
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas       530 Feb  6 05:03 boinc_task_state.xml
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas      1033 Feb  6 05:03 memory_monitor_summary.json
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas    368647 Feb  6 05:03 log.48442098._002823.job.log.tgz.1
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas      6383 Feb  6 05:03 heartbeat.json
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas        95 Feb  6 05:04 pilot_heartbeat.json
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas       822 Feb  6 05:04 pilotlog.txt
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 05:04 boinc_mmap_file
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas        27 Feb  6 05:04 wrapper_checkpoint.txt
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas    544852 Feb  6 05:04 log.48442098._002823.job.log.1
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas       357 Feb  6 05:04 output.list
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas       620 Feb  6 05:04 runtime_log
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas    931840 Feb  6 05:04 result.tar.gz
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas      9348 Feb  6 05:04 runtime_log.err
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas       651 Feb  6 05:04 dwhKDmIJT88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDme6XKDmfKhtKn.diag
[2026-02-06 05:04:00] -rw-r--r--. 1 boincer umatlas     21450 Feb  6 05:04 stderr.txt
[2026-02-06 05:04:00] HITS file was successfully produced:
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas 181800672 Feb  6 05:02 shared/HITS.pool.root.1
[2026-02-06 05:04:00]  *** Contents of shared directory: ***
[2026-02-06 05:04:00] total 660776
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas 493276920 Feb  6 04:03 ATLAS.root_0
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 04:03 start_atlas.sh
[2026-02-06 05:04:00] -rw-r--r--. 2 boincer umatlas    597953 Feb  6 04:03 input.tar.gz
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas 181800672 Feb  6 05:02 HITS.pool.root.1
[2026-02-06 05:04:00] -rw-------. 1 boincer umatlas    931840 Feb  6 05:04 result.tar.gz
05:04:02 (1644330): run_atlas exited; CPU time 35946.279185
05:04:02 (1644330): called boinc_finish(0)

</stderr_txt>
]]>

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