Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:43 (226715): wrapper (7.7.26015): starting
16:35:43 (226715): wrapper: running run_atlas (--nthreads 4)
[2026-02-06 16:35:43] Arguments: --nthreads 4
[2026-02-06 16:35:43] Threads: 4
[2026-02-06 16:35:43] Checking for CVMFS
[2026-02-06 16:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 16:35:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 16:35:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 16:35:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 16:35:43] 2.9.2.0 8228 610 73208 155951 3 50 31041307 36864000 0 130560 0 279994 99.982 27541 18142 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 16:35:43] CVMFS is ok
[2026-02-06 16:35:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 16:35:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 16:35:44] Further information can be found at the LHC@home message board.
[2026-02-06 16:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 16:35:44] Checking for apptainer binary...
[2026-02-06 16:35:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 16:35:44] Running /usr/bin/apptainer --version
[2026-02-06 16:35:44] apptainer version 1.4.1-1.1
[2026-02-06 16:35:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 16:35:44] atlasA237
[2026-02-06 16:35:44] apptainer works
[2026-02-06 16:35:44] Set ATHENA_PROC_NUMBER=4
[2026-02-06 16:35:44] Set ATHENA_CORE_NUMBER=4
[2026-02-06 16:35:44] Starting ATLAS job with PandaID=6996348556
[2026-02-06 16:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 17:49:10]  *** The last 200 lines of the pilot log: ***
[2026-02-06 17:49:10] 2026-02-06 16:48:41,223 | INFO     | [job] retrieve thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,224 | INFO     | [job] queue monitor thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,245 | INFO     | all payload control threads have been joined
[2026-02-06 17:49:10] 2026-02-06 16:48:41,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 17:49:10] 2026-02-06 16:48:41,387 | INFO     | [job] job monitor thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,534 | INFO     | [payload] failed_post thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,650 | INFO     | [job] control thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,688 | INFO     | [job] validate thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,751 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,855 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:41,929 | INFO     | [data] control thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:42,010 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:42,053 | INFO     | [data] copytool_in thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:42,251 | INFO     | [payload] control thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:42,433 | INFO     | [payload] validate_post thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:42,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:43,261 | INFO     | [data] copytool_out thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:48:44,224 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 17:49:10] 2026-02-06 16:49:03,248 | INFO     | [monitor] cgroup control has ended
[2026-02-06 17:49:10] 2026-02-06 16:49:03,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584922138432)>', '<ExcThread(monitor, started 140584094242560)>']
[2026-02-06 17:49:10] 2026-02-06 16:49:08,294 | INFO     | all workflow threads have been joined
[2026-02-06 17:49:10] 2026-02-06 16:49:08,294 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 17:49:10] 2026-02-06 16:49:08,294 | INFO     | traces error code: 0
[2026-02-06 17:49:10] 2026-02-06 16:49:08,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | INFO     | PID=230828 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 17:49:10] 2026-02-06 16:49:10,704 | INFO     | [monitor] control thread has ended
[2026-02-06 17:49:10] 2026-02-06 16:49:10,778 [wrapper] ==== pilot stdout END ====
[2026-02-06 17:49:10] 2026-02-06 16:49:10,782 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 17:49:10] 2026-02-06 16:49:10,786 [wrapper] pilotpid: 230828
[2026-02-06 17:49:10] 2026-02-06 16:49:10,790 [wrapper] Pilot exit status: 0
[2026-02-06 17:49:10] 2026-02-06 16:49:10,801 [wrapper] pandaids: 6996348556
[2026-02-06 17:49:10] 2026-02-06 16:49:10,827 [wrapper] cleanup supervisor_pilot  251475 230829
[2026-02-06 17:49:10] 2026-02-06 16:49:10,831 [wrapper] Test setup, not cleaning
[2026-02-06 17:49:10] 2026-02-06 16:49:10,835 [wrapper] apfmon messages muted
[2026-02-06 17:49:10] 2026-02-06 16:49:10,838 [wrapper] ==== wrapper stdout END ====
[2026-02-06 17:49:10] 2026-02-06 16:49:10,842 [wrapper] ==== wrapper stderr END ====
[2026-02-06 17:49:10]  *** Error codes and diagnostics ***
[2026-02-06 17:49:10]     "exeErrorCode": 0,
[2026-02-06 17:49:10]     "exeErrorDiag": "",
[2026-02-06 17:49:10]     "pilotErrorCode": 0,
[2026-02-06 17:49:10]     "pilotErrorDiag": "",
[2026-02-06 17:49:10]  *** Listing of results directory ***
[2026-02-06 17:49:10] total 671816
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:58 pilot3.tar.gz
[2026-02-06 17:49:10] -rwx------ 1 boinc boinc     36322 Feb  6 06:11 runpilot2-wrapper.sh
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      5111 Feb  6 06:15 queuedata.json
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc       100 Feb  6 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 17:49:10] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 16:35 run_atlas
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc       105 Feb  6 16:35 job.xml
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc 496319290 Feb  6 16:35 EVNT.48442096._000049.pool.root.1
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc    597950 Feb  6 16:35 input.tar.gz
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc     15845 Feb  6 16:35 start_atlas.sh
[2026-02-06 17:49:10] drwxrwx--x 2 boinc boinc      4096 Feb  6 16:35 shared
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc         0 Feb  6 16:35 boinc_setup_complete
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      6371 Feb  6 16:35 init_data.xml
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc         0 Feb  6 16:35 boinc_lockfile
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      2528 Feb  6 16:35 pandaJob.out
[2026-02-06 17:49:10] -rw------- 1 boinc boinc   1009512 Feb  6 16:35 agis_schedconf.cvmfs.json
[2026-02-06 17:49:10] -rw------- 1 boinc boinc   1513144 Feb  6 16:35 agis_ddmendpoints.agis.ALL.json
[2026-02-06 17:49:10] -rw------- 1 boinc boinc       424 Feb  6 16:35 workernode_map.json
[2026-02-06 17:49:10] drwx------ 5 boinc boinc      4096 Feb  6 16:35 pilot3
[2026-02-06 17:49:10] -rw------- 1 boinc boinc 185831167 Feb  6 17:48 HITS.48442098._002436.pool.root.1
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc       530 Feb  6 17:48 boinc_task_state.xml
[2026-02-06 17:49:10] -rw------- 1 boinc boinc        95 Feb  6 17:48 pilot_heartbeat.json
[2026-02-06 17:49:10] -rw------- 1 boinc boinc      1028 Feb  6 17:48 memory_monitor_summary.json
[2026-02-06 17:49:10] -rw------- 1 boinc boinc    289576 Feb  6 17:48 log.48442098._002436.job.log.tgz.1
[2026-02-06 17:49:10] -rw------- 1 boinc boinc      6324 Feb  6 17:48 heartbeat.json
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      8192 Feb  6 17:49 boinc_mmap_file
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc        27 Feb  6 17:49 wrapper_checkpoint.txt
[2026-02-06 17:49:10] -rw------- 1 boinc boinc       746 Feb  6 17:49 pilotlog.txt
[2026-02-06 17:49:10] -rw------- 1 boinc boinc    643117 Feb  6 17:49 log.48442098._002436.job.log.1
[2026-02-06 17:49:10] -rw------- 1 boinc boinc       357 Feb  6 17:49 output.list
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc       620 Feb  6 17:49 runtime_log
[2026-02-06 17:49:10] -rw------- 1 boinc boinc    952320 Feb  6 17:49 result.tar.gz
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      8911 Feb  6 17:49 runtime_log.err
[2026-02-06 17:49:10] -rw------- 1 boinc boinc       660 Feb  6 17:49 NFYMDm4IT88n9Rq4apOajLDm4fhM0noT9bVooX4SDm2eXKDmSvmiWn.diag
[2026-02-06 17:49:10] -rw-r--r-- 1 boinc boinc      6526 Feb  6 17:49 stderr.txt
[2026-02-06 17:49:10] HITS file was successfully produced:
[2026-02-06 17:49:10] -rw------- 1 boinc boinc 185831167 Feb  6 17:48 shared/HITS.pool.root.1
[2026-02-06 17:49:10]  *** Contents of shared directory: ***
[2026-02-06 17:49:10] total 667704
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc 496319290 Feb  6 16:35 ATLAS.root_0
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc    597950 Feb  6 16:35 input.tar.gz
[2026-02-06 17:49:10] -rw-r--r-- 2 boinc boinc     15845 Feb  6 16:35 start_atlas.sh
[2026-02-06 17:49:10] -rw------- 1 boinc boinc 185831167 Feb  6 17:48 HITS.pool.root.1
[2026-02-06 17:49:10] -rw------- 1 boinc boinc    952320 Feb  6 17:49 result.tar.gz
17:49:12 (226715): run_atlas exited; CPU time 16439.378133
17:49:12 (226715): called boinc_finish(0)

</stderr_txt>
]]>

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