Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:41:30 (75788): wrapper (7.7.26015): starting
16:41:30 (75788): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 16:41:30] Arguments: --nthreads 12
[2026-02-07 16:41:30] Threads: 12
[2026-02-07 16:41:30] Checking for CVMFS
[2026-02-07 16:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 16:41:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 16:41:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 16:41:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 16:41:31] 2.13.3.0 1820394 2129 49140 155990 2 50 2545863 4096000 0 130560 0 1728038 99.991 83611 1982 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-07 16:41:31] CVMFS is ok
[2026-02-07 16:41:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 16:41:31] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-07 16:41:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-07 16:41:31] Further information can be found at the LHC@home message board.
[2026-02-07 16:41:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 16:41:31] Checking for apptainer binary...
[2026-02-07 16:41:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 16:41:31] Running /usr/bin/apptainer --version
[2026-02-07 16:41:31] apptainer version 1.4.5
[2026-02-07 16:41:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 16:41:31] BoincUbuntu
[2026-02-07 16:41:31] apptainer works
[2026-02-07 16:41:31] Set ATHENA_PROC_NUMBER=12
[2026-02-07 16:41:31] Set ATHENA_CORE_NUMBER=12
[2026-02-07 16:41:31] Starting ATLAS job with PandaID=6995863864
[2026-02-07 16:41:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 17:24:16]  *** The last 200 lines of the pilot log: ***
[2026-02-07 17:24:16]  filetype=log
[2026-02-07 17:24:16]  guid=70fd25f7-12f7-4d12-a1ba-4208f7945bd3
[2026-02-07 17:24:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 17:24:16]  is_altstaged=None
[2026-02-07 17:24:16]  is_tar=False
[2026-02-07 17:24:16]  lfn=log.48318034._009614.job.log.tgz.1
[2026-02-07 17:24:16]  mtime=0
[2026-02-07 17:24:16]  protocol_id=None
[2026-02-07 17:24:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 17:24:16]  replicas=None
[2026-02-07 17:24:16]  scope=mc23_13p6TeV
[2026-02-07 17:24:16]  status=None
[2026-02-07 17:24:16]  status_code=0
[2026-02-07 17:24:16]  storage_token=
[2026-02-07 17:24:16]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6995863864/log.48318034._009614.job.log.tgz.1
[2026-02-07 17:24:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ca/log.48318034._009614.job.log.tgz.1
[2026-02-07 17:24:16]  workdir=None
[2026-02-07 17:24:16] ]
[2026-02-07 17:24:16] 2026-02-07 17:23:41,683 | INFO     | transferring file log.48318034._009614.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6995863864/log.48318034._009614.job.log.tgz.1 to /var/lib/boinc
[2026-02-07 17:24:16] 2026-02-07 17:23:41,683 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6995863864/log.48318034._009614.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.483180
[2026-02-07 17:24:16] 2026-02-07 17:23:41,701 | INFO     | adding to output.list: log.48318034._009614.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ca/log.48318034._009614.job.log.tg
[2026-02-07 17:24:16] 2026-02-07 17:23:41,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 17:24:16] 2026-02-07 17:23:41,701 | INFO     | summary of transferred files:
[2026-02-07 17:24:16] 2026-02-07 17:23:41,701 | INFO     |  -- lfn=log.48318034._009614.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 17:24:16] 2026-02-07 17:23:41,701 | INFO     | stage-out finished correctly
[2026-02-07 17:24:16] 2026-02-07 17:23:41,968 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 17:24:16] 2026-02-07 17:23:43,230 | INFO     | time since job start (2521s) is within the limit (349056.0s)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,463 | INFO     | job 6995863864 has state=finished
[2026-02-07 17:24:16] 2026-02-07 17:23:44,463 | INFO     | preparing for final server update for job 6995863864 in state='finished'
[2026-02-07 17:24:16] 2026-02-07 17:23:44,463 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-6995863864/jobReport.json
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | this job has now completed (state=finished)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | log transfer has been attempted: DONE
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | job 6995863864 has finished - writing final server update
[2026-02-07 17:24:16] 2026-02-07 17:23:44,465 | INFO     | total number of processed events: 400 (read)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,467 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6995863864/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,468 | INFO     | extracted standard info from prmon json
[2026-02-07 17:24:16] 2026-02-07 17:23:44,468 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 17:24:16] 2026-02-07 17:23:44,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 17:24:16] 2026-02-07 17:23:44,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 17:24:16] 2026-02-07 17:23:44,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | fitting pss+swap vs Time
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | sum of square deviations: 12176972.5
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | sum of deviations: -1773736192.4999998
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | mean x: 1770483830.5
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | mean y: 3075626.6764705884
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | intersect: 257897330409.12628
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | chi2: 0.0569157516205318
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | current memory leak: -145.66 B/s (using 34 data points, chi2=0.06)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | could have reported an average CPU frequency of 3931 MHz (5 samples)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,469 | INFO     | ..............................
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . Timing measurements:
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . get job = 0 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . initial setup = 3 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . payload setup = 2 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . stage-in = 0 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . payload execution = 2500 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . stage-out = 0 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | . log creation = 0 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,470 | INFO     | ..............................
[2026-02-07 17:24:16] 2026-02-07 17:23:44,525 | INFO     | 
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | job summary report
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | --------------------------------------------------
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | PanDA job id: 6995863864
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | task id: 48318034
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | errors: (none)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | pilot state: finished 
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | transexitcode: 0
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | exeerrorcode: 0
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | exeerrordiag: 
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | exitcode: 0
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | exitmsg: OK
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | cpuconsumptiontime: 27129 s
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | nevents: 400
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | neventsw: 0
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | pid: 84780
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | pgrp: 84780
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | corecount: 12
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | event service: False
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | sizes: {0: 2283058, 10: 2283058, 2507: 2308277, 2508: 2317289, 2509: 2317345, 2511: 2317571}
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | --------------------------------------------------
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | 
[2026-02-07 17:24:16] 2026-02-07 17:23:44,526 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | job 6995863864 has completed (purged errors)
[2026-02-07 17:24:16] 2026-02-07 17:23:44,549 | INFO     | overall cleanup function is called
[2026-02-07 17:24:16] 2026-02-07 17:23:45,556 | INFO     | --- collectZombieJob: --- 10, [84780]
[2026-02-07 17:24:16] 2026-02-07 17:23:45,556 | INFO     | zombie collector waiting for pid 84780
[2026-02-07 17:24:16] 2026-02-07 17:23:45,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 17:24:16] 2026-02-07 17:23:45,556 | INFO     | collected zombie processes
[2026-02-07 17:24:16] 2026-02-07 17:23:45,556 | INFO     | will attempt to kill all subprocesses of pid=84780
[2026-02-07 17:24:16] 2026-02-07 17:23:45,632 | INFO     | process IDs to be killed: [84780] (in reverse order)
[2026-02-07 17:24:16] 2026-02-07 17:23:45,669 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 17:24:16] 2026-02-07 17:23:45,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 17:24:16] 2026-02-07 17:23:45,671 | INFO     | did not find any defunct processes belonging to 84780
[2026-02-07 17:24:16] 2026-02-07 17:23:45,674 | INFO     | did not find any defunct processes belonging to 84780
[2026-02-07 17:24:16] 2026-02-07 17:23:45,674 | INFO     | ready for new job
[2026-02-07 17:24:16] 2026-02-07 17:23:45,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 17:24:16] 2026-02-07 17:23:45,675 | INFO     | **************************************
[2026-02-07 17:24:16] 2026-02-07 17:23:45,675 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 17:24:16] 2026-02-07 17:23:45,675 | INFO     | **************************************
[2026-02-07 17:24:16] 2026-02-07 17:23:45,675 | INFO     | 
[2026-02-07 17:24:16] 2026-02-07 17:23:45,676 | INFO     | architecture information:
[2026-02-07 17:24:16] 2026-02-07 17:23:45,676 | INFO     | executing command: cat /etc/os-release
[2026-02-07 17:24:16] 2026-02-07 17:23:45,689 | INFO     | cat /etc/os-release:
[2026-02-07 17:24:16] NAME="CentOS Linux"
[2026-02-07 17:24:16] VERSION="7 (Core)"
[2026-02-07 17:24:16] ID="centos"
[2026-02-07 17:24:16] ID_LIKE="rhel fedora"
[2026-02-07 17:24:16] VERSION_ID="7"
[2026-02-07 17:24:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 17:24:16] ANSI_COLOR="0;31"
[2026-02-07 17:24:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 17:24:16] HOME_URL="https://www.centos.org/"
[2026-02-07 17:24:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 17:24:16] 
[2026-02-07 17:24:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 17:24:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 17:24:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 17:24:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 17:24:16] 
[2026-02-07 17:24:16] 2026-02-07 17:23:45,690 | INFO     | **************************************
[2026-02-07 17:24:16] 2026-02-07 17:23:46,192 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | INFO     | sufficient remaining disk space (273974034432 B)
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | INFO     | update_server=False
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 17:24:16] 2026-02-07 17:23:46,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:24:16] 2026-02-07 17:23:46,451 | INFO     | [monitor] cgroup control has ended
[2026-02-07 17:24:16] 2026-02-07 17:23:46,699 | INFO     | all payload control threads have been joined
[2026-02-07 17:24:16] 2026-02-07 17:23:46,832 | WARNING  | process 84780 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 17:24:16] 2026-02-07 17:23:46,880 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:24:16] 2026-02-07 17:23:46,953 | INFO     | number of running child processes to parent process 84780: 1
[2026-02-07 17:24:16] 2026-02-07 17:23:46,953 | INFO     | maximum number of monitored processes: 6
[2026-02-07 17:24:16] 2026-02-07 17:23:46,953 | INFO     | aborting job monitoring since job object (job id=6995863864) has expired
[2026-02-07 17:24:16] 2026-02-07 17:23:46,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:24:16] 2026-02-07 17:23:46,953 | INFO     | will abort loop
[2026-02-07 17:24:16] 2026-02-07 17:23:47,100 | INFO     | all data control threads have been joined
[2026-02-07 17:24:16] 2026-02-07 17:23:47,212 | INFO     | [job] retrieve thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,213 | INFO     | [job] queue monitor thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 17:24:16] 2026-02-07 17:23:47,435 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,555 | INFO     | all job control threads have been joined
[2026-02-07 17:24:16] 2026-02-07 17:23:47,658 | INFO     | [job] validate thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,704 | INFO     | [payload] control thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,770 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,827 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,891 | INFO     | [payload] validate_post thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,958 | INFO     | [job] job monitor thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:47,975 | INFO     | [data] copytool_in thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:48,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 17:24:16] 2026-02-07 17:23:48,105 | INFO     | [data] control thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:48,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:48,560 | INFO     | [job] control thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:48,673 | INFO     | [payload] failed_post thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:49,269 | INFO     | [data] copytool_out thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:52,034 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 17:24:16] 2026-02-07 17:23:53,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130087634270016)>', '<ExcThread(monitor, started 130087127062272)>']
[2026-02-07 17:24:16] 2026-02-07 17:23:58,842 | INFO     | all workflow threads have been joined
[2026-02-07 17:24:16] 2026-02-07 17:23:58,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 17:24:16] 2026-02-07 17:23:58,842 | INFO     | traces error code: 0
[2026-02-07 17:24:16] 2026-02-07 17:23:58,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 17:24:16] 2026-02-07 17:24:16,367 | INFO     | PID=80041 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 17:24:16] 2026-02-07 17:24:16,368 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 17:24:16] 2026-02-07 17:24:16,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 17:24:16] 2026-02-07 17:24:16,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 17:24:16] 2026-02-07 17:24:16,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 17:24:16] 2026-02-07 17:24:16,368 | INFO     | [monitor] control thread has ended
[2026-02-07 17:24:16] 2026-02-07 17:24:16,439 [wrapper] ==== pilot stdout END ====
[2026-02-07 17:24:16] 2026-02-07 17:24:16,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 17:24:16] 2026-02-07 17:24:16,443 [wrapper] pilotpid: 80041
[2026-02-07 17:24:16] 2026-02-07 17:24:16,445 [wrapper] Pilot exit status: 0
[2026-02-07 17:24:16] 2026-02-07 17:24:16,452 [wrapper] pandaids: 6995863864
[2026-02-07 17:24:16] 2026-02-07 17:24:16,483 [wrapper] cleanup supervisor_pilot  115528 80042
[2026-02-07 17:24:16] 2026-02-07 17:24:16,487 [wrapper] Test setup, not cleaning
[2026-02-07 17:24:16] 2026-02-07 17:24:16,489 [wrapper] apfmon messages muted
[2026-02-07 17:24:16] 2026-02-07 17:24:16,491 [wrapper] ==== wrapper stdout END ====
[2026-02-07 17:24:16] 2026-02-07 17:24:16,493 [wrapper] ==== wrapper stderr END ====
[2026-02-07 17:24:16]  *** Error codes and diagnostics ***
[2026-02-07 17:24:16]     "exeErrorCode": 0,
[2026-02-07 17:24:16]     "exeErrorDiag": "",
[2026-02-07 17:24:16]     "pilotErrorCode": 0,
[2026-02-07 17:24:16]     "pilotErrorDiag": "",
[2026-02-07 17:24:16]  *** Listing of results directory ***
[2026-02-07 17:24:16] total 677716
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc    584627 Feb  6 04:58 pilot3.tar.gz
[2026-02-07 17:24:16] -rwx------ 1 boinc boinc     36322 Feb  6 05:10 runpilot2-wrapper.sh
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:14 queuedata.json
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc       100 Feb  7 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 17:24:16] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 16:41 run_atlas
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc       105 Feb  7 16:41 job.xml
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc 501571057 Feb  7 16:41 EVNT.48318032._000184.pool.root.1
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc      9654 Feb  7 16:41 init_data.xml
[2026-02-07 17:24:16] drwxrwx--x 2 boinc boinc      4096 Feb  7 16:41 shared
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc    597966 Feb  7 16:41 input.tar.gz
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:41 start_atlas.sh
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc         0 Feb  7 16:41 boinc_lockfile
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc      2536 Feb  7 16:41 pandaJob.out
[2026-02-07 17:24:16] -rw------- 1 boinc boinc   1009502 Feb  7 16:41 agis_schedconf.cvmfs.json
[2026-02-07 17:24:16] -rw------- 1 boinc boinc   1513088 Feb  7 16:41 agis_ddmendpoints.agis.ALL.json
[2026-02-07 17:24:16] -rw------- 1 boinc boinc       416 Feb  7 16:41 workernode_map.json
[2026-02-07 17:24:16] drwx------ 5 boinc boinc      4096 Feb  7 16:41 pilot3
[2026-02-07 17:24:16] -rw------- 1 boinc boinc 186960608 Feb  7 17:23 HITS.48318034._009614.pool.root.1
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc       530 Feb  7 17:23 boinc_task_state.xml
[2026-02-07 17:24:16] -rw------- 1 boinc boinc      1012 Feb  7 17:23 memory_monitor_summary.json
[2026-02-07 17:24:16] -rw------- 1 boinc boinc    361026 Feb  7 17:23 log.48318034._009614.job.log.tgz.1
[2026-02-07 17:24:16] -rw------- 1 boinc boinc      6275 Feb  7 17:23 heartbeat.json
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc      8192 Feb  7 17:23 boinc_mmap_file
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc        27 Feb  7 17:23 wrapper_checkpoint.txt
[2026-02-07 17:24:16] -rw------- 1 boinc boinc       745 Feb  7 17:24 pilotlog.txt
[2026-02-07 17:24:16] -rw------- 1 boinc boinc        95 Feb  7 17:24 pilot_heartbeat.json
[2026-02-07 17:24:16] -rw------- 1 boinc boinc    394212 Feb  7 17:24 log.48318034._009614.job.log.1
[2026-02-07 17:24:16] -rw------- 1 boinc boinc       357 Feb  7 17:24 output.list
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc       620 Feb  7 17:24 runtime_log
[2026-02-07 17:24:16] -rw------- 1 boinc boinc    768000 Feb  7 17:24 result.tar.gz
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc      8910 Feb  7 17:24 runtime_log.err
[2026-02-07 17:24:16] -rw------- 1 boinc boinc       649 Feb  7 17:24 0SVNDmJIT88n9Rq4apOajLDm4fhM0noT9bVooX4SDmadXKDm7beaEm.diag
[2026-02-07 17:24:16] -rw-r--r-- 1 boinc boinc     21412 Feb  7 17:24 stderr.txt
[2026-02-07 17:24:16] HITS file was successfully produced:
[2026-02-07 17:24:16] -rw------- 1 boinc boinc 186960608 Feb  7 17:23 shared/HITS.pool.root.1
[2026-02-07 17:24:16]  *** Contents of shared directory: ***
[2026-02-07 17:24:16] total 673756
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc 501571057 Feb  7 16:41 ATLAS.root_0
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc    597966 Feb  7 16:41 input.tar.gz
[2026-02-07 17:24:16] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:41 start_atlas.sh
[2026-02-07 17:24:16] -rw------- 1 boinc boinc 186960608 Feb  7 17:23 HITS.pool.root.1
[2026-02-07 17:24:16] -rw------- 1 boinc boinc    768000 Feb  7 17:24 result.tar.gz
17:24:18 (75788): run_atlas exited; CPU time 27131.321676
17:24:18 (75788): called boinc_finish(0)

</stderr_txt>
]]>

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