Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:26 (549307): wrapper (7.7.26015): starting
05:23:26 (549307): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 05:23:26] Arguments: --nthreads 12
[2026-02-06 05:23:26] Threads: 12
[2026-02-06 05:23:26] Checking for CVMFS
[2026-02-06 05:23:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 05:23:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 05:23:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 05:23:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 05:23:27] 2.11.5.0 3810059 96911 195512 155947 2 194 33534726 45568000 18346 130560 0 580141445 99.800 369802394 19516 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-06 05:23:27] CVMFS is ok
[2026-02-06 05:23:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 05:23:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 05:23:27] Further information can be found at the LHC@home message board.
[2026-02-06 05:23:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 05:23:27] Checking for apptainer binary...
[2026-02-06 05:23:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 05:23:27] Running /usr/bin/apptainer --version
[2026-02-06 05:23:27] apptainer version 1.4.1-1.el9
[2026-02-06 05:23:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 05:23:28] wns0043.triumf.lcg
[2026-02-06 05:23:28] apptainer works
[2026-02-06 05:23:28] Set ATHENA_PROC_NUMBER=12
[2026-02-06 05:23:28] Set ATHENA_CORE_NUMBER=12
[2026-02-06 05:23:29] Starting ATLAS job with PandaID=6996410713
[2026-02-06 05:23:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 05:28:50]  *** The last 200 lines of the pilot log: ***
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | WARNING  | wrong length of table data, x=[1770384351.0], y=[1068.0] (must be same and length>=4)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | INFO     | could have reported an average CPU frequency of 1385 MHz (4 samples)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . Timing measurements:
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . get job = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . initial setup = 34 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload setup = 30 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-in = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload execution = 52 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-out = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . log creation = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:28:50] 2026-02-06 13:28:16,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996410713/pilotlog.txt
[2026-02-06 05:28:50] 2026-02-06 13:28:16,274 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 05:28:50] - Log from pilotlog.txt -
[2026-02-06 05:28:50] 2026-02-06 13:28:16,199 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996410713/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,208 | INFO     | extracted standard info from prmon json
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | WARNING  | wrong length of table data, x=[1770384351.0], y=[1068.0] (must be same and length>=4)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | INFO     | could have reported an average CPU frequency of 1385 MHz (4 samples)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . Timing measurements:
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . get job = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . initial setup = 34 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload setup = 30 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-in = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload execution = 52 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-out = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . log creation = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:28:50] 2026-02-06 13:28:16,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996410713/pilotlog.txt
[2026-02-06 05:28:50] 2026-02-06 13:28:16,274 | WARNING  | 
[2026-02-06 05:28:50] [begin log extracts]
[2026-02-06 05:28:50] - Log from pilotlog.txt -
[2026-02-06 05:28:50] 2026-02-06 13:28:16,199 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996410713/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,208 | INFO     | extracted standard info from prmon json
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 05:28:50] 2026-02-06 13:28:16,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | WARNING  | wrong length of table data, x=[1770384351.0], y=[1068.0] (must be same and length>=4)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,210 | INFO     | could have reported an average CPU frequency of 1385 MHz (4 samples)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . Timing measurements:
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . get job = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . initial setup = 34 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload setup = 30 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-in = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . payload execution = 52 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . stage-out = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | . log creation = 0 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | ..............................
[2026-02-06 05:28:50] 2026-02-06 13:28:16,211 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 05:28:50] 2026-02-06 13:28:16,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996410713/pilotlog.txt
[2026-02-06 05:28:50] [end log extracts]
[2026-02-06 05:28:50] 2026-02-06 13:28:16,275 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,276 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | 
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | job summary report
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | --------------------------------------------------
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | PanDA job id: 6996410713
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | task id: 48431113
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 05:26:08,362 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 05:28:50] 2026-02-06 13:28:16,883 | INFO     | pilot state: failed 
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | transexitcode: 65
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | exeerrorcode: 65
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | exitcode: 65
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | cpuconsumptiontime: 23 s
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | nevents: 0
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | neventsw: 0
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | pid: 557780
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | pgrp: 557780
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | corecount: 12
[2026-02-06 05:28:50] 2026-02-06 13:28:16,884 | INFO     | event service: False
[2026-02-06 05:28:50] 2026-02-06 13:28:16,885 | INFO     | sizes: {0: 2282027, 1: 2282709, 2: 2283170, 13: 2283170, 88: 2306435, 89: 2310883, 207: 2311021}
[2026-02-06 05:28:50] 2026-02-06 13:28:16,885 | INFO     | --------------------------------------------------
[2026-02-06 05:28:50] 2026-02-06 13:28:16,885 | INFO     | 
[2026-02-06 05:28:50] 2026-02-06 13:28:16,885 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 05:28:50] 2026-02-06 13:28:17,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 05:28:50] 2026-02-06 13:28:17,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,024 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 05:28:50] 2026-02-06 13:28:17,024 | INFO     | job 6996410713 has completed (purged errors)
[2026-02-06 05:28:50] 2026-02-06 13:28:17,024 | INFO     | overall cleanup function is called
[2026-02-06 05:28:50] 2026-02-06 13:28:18,033 | INFO     | --- collectZombieJob: --- 10, [557780]
[2026-02-06 05:28:50] 2026-02-06 13:28:18,033 | INFO     | zombie collector waiting for pid 557780
[2026-02-06 05:28:50] 2026-02-06 13:28:18,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 05:28:50] 2026-02-06 13:28:18,033 | INFO     | collected zombie processes
[2026-02-06 05:28:50] 2026-02-06 13:28:18,033 | INFO     | will attempt to kill all subprocesses of pid=557780
[2026-02-06 05:28:50] 2026-02-06 13:28:19,108 | INFO     | process IDs to be killed: [557780] (in reverse order)
[2026-02-06 05:28:50] 2026-02-06 13:28:19,279 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 05:28:50] 2026-02-06 13:28:19,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 05:28:50] 2026-02-06 13:28:19,296 | INFO     | did not find any defunct processes belonging to 557780
[2026-02-06 05:28:50] 2026-02-06 13:28:19,306 | INFO     | did not find any defunct processes belonging to 557780
[2026-02-06 05:28:50] 2026-02-06 13:28:19,307 | INFO     | ready for new job
[2026-02-06 05:28:50] 2026-02-06 13:28:19,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 05:28:50] 2026-02-06 13:28:19,321 | INFO     | **************************************
[2026-02-06 05:28:50] 2026-02-06 13:28:19,321 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 05:28:50] 2026-02-06 13:28:19,321 | INFO     | **************************************
[2026-02-06 05:28:50] 2026-02-06 13:28:19,322 | INFO     | 
[2026-02-06 05:28:50] 2026-02-06 13:28:19,344 | INFO     | architecture information:
[2026-02-06 05:28:50] 2026-02-06 13:28:19,345 | INFO     | executing command: cat /etc/os-release
[2026-02-06 05:28:50] 2026-02-06 13:28:19,448 | INFO     | cat /etc/os-release:
[2026-02-06 05:28:50] NAME="CentOS Linux"
[2026-02-06 05:28:50] VERSION="7 (Core)"
[2026-02-06 05:28:50] ID="centos"
[2026-02-06 05:28:50] ID_LIKE="rhel fedora"
[2026-02-06 05:28:50] VERSION_ID="7"
[2026-02-06 05:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 05:28:50] ANSI_COLOR="0;31"
[2026-02-06 05:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 05:28:50] HOME_URL="https://www.centos.org/"
[2026-02-06 05:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 05:28:50] 
[2026-02-06 05:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 05:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 05:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 05:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 05:28:50] 
[2026-02-06 05:28:50] 2026-02-06 13:28:19,449 | INFO     | **************************************
[2026-02-06 05:28:50] 2026-02-06 13:28:19,952 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 05:28:50] 2026-02-06 13:28:20,108 | INFO     | sufficient remaining disk space (2046847614976 B)
[2026-02-06 05:28:50] 2026-02-06 13:28:20,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 05:28:50] 2026-02-06 13:28:20,108 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 05:28:50] 2026-02-06 13:28:20,108 | INFO     | update_server=False
[2026-02-06 05:28:50] 2026-02-06 13:28:20,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 05:28:50] 2026-02-06 13:28:20,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 05:28:50] 2026-02-06 13:28:20,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:28:50] 2026-02-06 13:28:20,238 | INFO     | aborting loop
[2026-02-06 05:28:50] 2026-02-06 13:28:20,271 | INFO     | all data control threads have been joined
[2026-02-06 05:28:50] 2026-02-06 13:28:20,587 | INFO     | all payload control threads have been joined
[2026-02-06 05:28:50] 2026-02-06 13:28:21,012 | INFO     | all job control threads have been joined
[2026-02-06 05:28:50] 2026-02-06 13:28:21,115 | INFO     | [job] retrieve thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,176 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,244 | INFO     | [job] job monitor thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,277 | INFO     | [data] control thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,608 | INFO     | [payload] control thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,767 | INFO     | [payload] failed_post thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:21,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 05:28:50] 2026-02-06 13:28:22,018 | INFO     | [job] control thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,128 | INFO     | [data] copytool_out thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 05:28:50] 2026-02-06 13:28:22,270 | INFO     | [data] copytool_in thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,408 | INFO     | [payload] validate_post thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,431 | INFO     | [job] validate thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,431 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,485 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:22,915 | INFO     | [job] queue monitor thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:26,262 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 05:28:50] 2026-02-06 13:28:36,075 | INFO     | [monitor] cgroup control has ended
[2026-02-06 05:28:50] 2026-02-06 13:28:36,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610318350144)>', '<ExcThread(monitor, started 140609109096192)>']
[2026-02-06 05:28:50] 2026-02-06 13:28:41,546 | INFO     | all workflow threads have been joined
[2026-02-06 05:28:50] 2026-02-06 13:28:41,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 05:28:50] 2026-02-06 13:28:41,568 | INFO     | traces error code: 0
[2026-02-06 05:28:50] 2026-02-06 13:28:41,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 05:28:50] 2026-02-06 13:28:49,092 | INFO     | PID=553022 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 05:28:50] 2026-02-06 13:28:49,092 | INFO     | .. there are 28 such processes running
[2026-02-06 05:28:50] 2026-02-06 13:28:49,093 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 05:28:50] 2026-02-06 13:28:49,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 05:28:50] 2026-02-06 13:28:49,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 05:28:50] 2026-02-06 13:28:49,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 05:28:50] 2026-02-06 13:28:49,093 | INFO     | [monitor] control thread has ended
[2026-02-06 05:28:50] 2026-02-06 13:28:49,239 [wrapper] ==== pilot stdout END ====
[2026-02-06 05:28:50] 2026-02-06 13:28:49,243 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 05:28:50] 2026-02-06 13:28:49,246 [wrapper] pilotpid: 553022
[2026-02-06 05:28:50] 2026-02-06 13:28:49,249 [wrapper] Pilot exit status: 0
[2026-02-06 05:28:50] 2026-02-06 13:28:49,369 [wrapper] pandaids: 6996410713
[2026-02-06 05:28:50] 2026-02-06 13:28:49,838 [wrapper] cleanup supervisor_pilot  553028 553023
[2026-02-06 05:28:50] 2026-02-06 13:28:49,843 [wrapper] Test setup, not cleaning
[2026-02-06 05:28:50] 2026-02-06 13:28:49,846 [wrapper] apfmon messages muted
[2026-02-06 05:28:50] 2026-02-06 13:28:49,849 [wrapper] ==== wrapper stdout END ====
[2026-02-06 05:28:50] 2026-02-06 13:28:49,853 [wrapper] ==== wrapper stderr END ====
[2026-02-06 05:28:50]  *** Error codes and diagnostics ***
[2026-02-06 05:28:50]     "exeErrorCode": 65,
[2026-02-06 05:28:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 05:28:50]     "pilotErrorCode": 1305,
[2026-02-06 05:28:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 05:28:50]  *** Listing of results directory ***
[2026-02-06 05:28:50] total 643180
[2026-02-06 05:28:50] -rwx------. 1 boinc boinc     36322 Feb  5 23:42 runpilot2-wrapper.sh
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc    584627 Feb  5 23:44 pilot3.tar.gz
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc      5111 Feb  5 23:46 queuedata.json
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc       100 Feb  6 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 05:28:50] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 05:23 run_atlas
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc       105 Feb  6 05:23 job.xml
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc      6594 Feb  6 05:23 init_data.xml
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc 654468268 Feb  6 05:23 EVNT.48431111._000077.pool.root.1
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc     15845 Feb  6 05:23 start_atlas.sh
[2026-02-06 05:28:50] drwxrwx--x. 2 boinc boinc      4096 Feb  6 05:23 shared
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc    597959 Feb  6 05:23 input.tar.gz
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc         0 Feb  6 05:23 boinc_lockfile
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc      2544 Feb  6 05:23 pandaJob.out
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc   1009504 Feb  6 05:24 agis_schedconf.cvmfs.json
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc   1513144 Feb  6 05:24 agis_ddmendpoints.agis.ALL.json
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc       445 Feb  6 05:24 workernode_map.json
[2026-02-06 05:28:50] drwx------. 5 boinc boinc      4096 Feb  6 05:24 pilot3
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc       525 Feb  6 05:26 boinc_task_state.xml
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc       965 Feb  6 05:26 memory_monitor_summary.json
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc     21868 Feb  6 05:26 log.48431113._003810.job.log.tgz.1
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc        95 Feb  6 05:28 pilot_heartbeat.json
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc      7021 Feb  6 05:28 heartbeat.json
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc      8192 Feb  6 05:28 boinc_mmap_file
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc        23 Feb  6 05:28 wrapper_checkpoint.txt
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc       822 Feb  6 05:28 pilotlog.txt
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc     87128 Feb  6 05:28 log.48431113._003810.job.log.1
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc       188 Feb  6 05:28 output.list
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc       620 Feb  6 05:28 runtime_log
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc    122880 Feb  6 05:28 result.tar.gz
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc      8635 Feb  6 05:28 runtime_log.err
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc       643 Feb  6 05:28 K9OKDmzeV88n9Rq4apOajLDm4fhM0noT9bVooX4SDm28XKDm0SNakm.diag
[2026-02-06 05:28:50] -rw-r--r--. 1 boinc boinc     21766 Feb  6 05:28 stderr.txt
[2026-02-06 05:28:50] No HITS result produced
[2026-02-06 05:28:50]  *** Contents of shared directory: ***
[2026-02-06 05:28:50] total 639856
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc 654468268 Feb  6 05:23 ATLAS.root_0
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc     15845 Feb  6 05:23 start_atlas.sh
[2026-02-06 05:28:50] -rw-r--r--. 2 boinc boinc    597959 Feb  6 05:23 input.tar.gz
[2026-02-06 05:28:50] -rw-------. 1 boinc boinc    122880 Feb  6 05:28 result.tar.gz
05:28:51 (549307): run_atlas exited; CPU time 32.488966
05:28:51 (549307): called boinc_finish(0)

</stderr_txt>
]]>

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