Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:30:06 (287100): wrapper (7.7.26015): starting
09:30:06 (287100): wrapper: running run_atlas (--nthreads 4)
[2026-02-06 09:30:06] Arguments: --nthreads 4
[2026-02-06 09:30:06] Threads: 4
[2026-02-06 09:30:06] Checking for CVMFS
[2026-02-06 09:30:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 09:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 09:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 09:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 09:30:29] 2.11.0.0 245071 577 52524 155948 0 49 2640414 4096001 0 130560 0 128273 99.964 24656 578 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-06 09:30:29] CVMFS is ok
[2026-02-06 09:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 09:30:29] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-06 09:30:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-06 09:30:29] Further information can be found at the LHC@home message board.
[2026-02-06 09:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 09:30:29] Checking for apptainer binary...
[2026-02-06 09:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 09:30:29] Running /usr/bin/apptainer --version
[2026-02-06 09:30:29] apptainer version 1.4.5-2.fc43
[2026-02-06 09:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 09:30:29] fedora
[2026-02-06 09:30:29] apptainer works
[2026-02-06 09:30:29] Set ATHENA_PROC_NUMBER=4
[2026-02-06 09:30:29] Set ATHENA_CORE_NUMBER=4
[2026-02-06 09:30:29] Starting ATLAS job with PandaID=7000893513
[2026-02-06 09:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 13:56:17]  *** The last 200 lines of the pilot log: ***
[2026-02-06 13:56:17] 2026-02-06 18:55:07,962 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-06 13:56:17] 2026-02-06 18:55:08,805 | INFO     | time since job start (15863s) is within the limit (349056.0s)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,328 | INFO     | job 7000893513 has state=finished
[2026-02-06 13:56:17] 2026-02-06 18:55:09,329 | INFO     | preparing for final server update for job 7000893513 in state='finished'
[2026-02-06 13:56:17] 2026-02-06 18:55:09,329 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7000893513/jobReport.json
[2026-02-06 13:56:17] 2026-02-06 18:55:09,332 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-06 13:56:17] 2026-02-06 18:55:09,332 | INFO     | this job has now completed (state=finished)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,332 | INFO     | log transfer has been attempted: DONE
[2026-02-06 13:56:17] 2026-02-06 18:55:09,333 | INFO     | job 7000893513 has finished - writing final server update
[2026-02-06 13:56:17] 2026-02-06 18:55:09,333 | INFO     | total number of processed events: 400 (read)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,334 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000893513/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,334 | INFO     | extracted standard info from prmon json
[2026-02-06 13:56:17] 2026-02-06 18:55:09,334 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 13:56:17] 2026-02-06 18:55:09,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 13:56:17] 2026-02-06 18:55:09,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 13:56:17] 2026-02-06 18:55:09,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 13:56:17] 2026-02-06 18:55:09,337 | INFO     | fitting pss+swap vs Time
[2026-02-06 13:56:17] 2026-02-06 18:55:09,337 | INFO     | sum of square deviations: 5449944045.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,338 | INFO     | sum of deviations: -91462971841.00006
[2026-02-06 13:56:17] 2026-02-06 18:55:09,339 | INFO     | mean x: 1770396162.5
[2026-02-06 13:56:17] 2026-02-06 18:55:09,339 | INFO     | mean y: 2452847.2461538464
[2026-02-06 13:56:17] 2026-02-06 18:55:09,339 | INFO     | intersect: 29713894473.277027
[2026-02-06 13:56:17] 2026-02-06 18:55:09,339 | INFO     | chi2: 1.8565199164477137
[2026-02-06 13:56:17] 2026-02-06 18:55:09,339 | INFO     | sum of square deviations: 5141528960.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,340 | INFO     | sum of deviations: -89168621785.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,340 | INFO     | mean x: 1770396010.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,340 | INFO     | mean y: 2453981.8549019606
[2026-02-06 13:56:17] 2026-02-06 18:55:09,340 | INFO     | intersect: 30706116929.88254
[2026-02-06 13:56:17] 2026-02-06 18:55:09,341 | INFO     | chi2: 1.8484295857593238
[2026-02-06 13:56:17] 2026-02-06 18:55:09,341 | INFO     | current chi2=1.8484295857593238 (change=0.4357793642133431 %)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,341 | INFO     | right removable region: 254
[2026-02-06 13:56:17] 2026-02-06 18:55:09,341 | INFO     | sum of square deviations: 5141528960.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | sum of deviations: -118913003805.00003
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | mean x: 1770396315.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | mean y: 2466219.5960784312
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | intersect: 40948096474.677444
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | chi2: 0.5425198923876127
[2026-02-06 13:56:17] 2026-02-06 18:55:09,342 | INFO     | current chi2=0.5425198923876127 (change=70.77758834789792 %)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,343 | INFO     | sum of square deviations: 4844974562.5
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | sum of deviations: -108082839081.00002
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | mean x: 1770396467.5
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | mean y: 2460647.224
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | intersect: 39496884000.32357
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | chi2: 0.5345135974785215
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | current chi2=0.5345135974785215 (change=1.475760616602604 %)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | left removable region: 20
[2026-02-06 13:56:17] 2026-02-06 18:55:09,344 | INFO     | sum of square deviations: 3972995422.5
[2026-02-06 13:56:17] 2026-02-06 18:55:09,345 | INFO     | sum of deviations: -81714222803.0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,345 | INFO     | mean x: 1770396589.5
[2026-02-06 13:56:17] 2026-02-06 18:55:09,345 | INFO     | mean y: 2448835.564102564
[2026-02-06 13:56:17] 2026-02-06 18:55:09,345 | INFO     | intersect: 36414920026.64419
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | chi2: 0.48747873556016696
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | current memory leak: -20.57 B/s (using 234 data points, chi2=0.49)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | could have reported an average CPU frequency of 2799 MHz (12 samples)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | ..............................
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . Timing measurements:
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . get job = 0 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . initial setup = 5 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . payload setup = 3 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . stage-in = 0 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . payload execution = 15840 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . stage-out = 3 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | . log creation = 0 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,346 | INFO     | ..............................
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | 
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | job summary report
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | --------------------------------------------------
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | PanDA job id: 7000893513
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | task id: 48431080
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | errors: (none)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 13:56:17] 2026-02-06 18:55:09,388 | INFO     | pilot state: finished 
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | transexitcode: 0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | exeerrorcode: 0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | exeerrordiag: 
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | exitcode: 0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | exitmsg: OK
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | cpuconsumptiontime: 61353 s
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | nevents: 400
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | neventsw: 0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | pid: 295486
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | pgrp: 295486
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | corecount: 4
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | event service: False
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | sizes: {0: 2283134, 11: 2283134, 15847: 2314571, 15851: 2323569, 15852: 2323625, 15853: 2323819}
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | --------------------------------------------------
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | 
[2026-02-06 13:56:17] 2026-02-06 18:55:09,389 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 13:56:17] 2026-02-06 18:55:09,405 | INFO     | job 7000893513 has completed (purged errors)
[2026-02-06 13:56:17] 2026-02-06 18:55:09,405 | INFO     | overall cleanup function is called
[2026-02-06 13:56:17] 2026-02-06 18:55:10,411 | INFO     | --- collectZombieJob: --- 10, [295486]
[2026-02-06 13:56:17] 2026-02-06 18:55:10,411 | INFO     | zombie collector waiting for pid 295486
[2026-02-06 13:56:17] 2026-02-06 18:55:10,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 13:56:17] 2026-02-06 18:55:10,412 | INFO     | collected zombie processes
[2026-02-06 13:56:17] 2026-02-06 18:55:10,412 | INFO     | will attempt to kill all subprocesses of pid=295486
[2026-02-06 13:56:17] 2026-02-06 18:55:10,469 | INFO     | process IDs to be killed: [295486] (in reverse order)
[2026-02-06 13:56:17] 2026-02-06 18:55:10,497 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 13:56:17] 2026-02-06 18:55:10,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 13:56:17] 2026-02-06 18:55:10,499 | INFO     | did not find any defunct processes belonging to 295486
[2026-02-06 13:56:17] 2026-02-06 18:55:10,501 | INFO     | did not find any defunct processes belonging to 295486
[2026-02-06 13:56:17] 2026-02-06 18:55:10,501 | INFO     | ready for new job
[2026-02-06 13:56:17] 2026-02-06 18:55:10,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | **************************************
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | **************************************
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | 
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | architecture information:
[2026-02-06 13:56:17] 2026-02-06 18:55:10,503 | INFO     | executing command: cat /etc/os-release
[2026-02-06 13:56:17] 2026-02-06 18:55:10,513 | INFO     | cat /etc/os-release:
[2026-02-06 13:56:17] NAME="CentOS Linux"
[2026-02-06 13:56:17] VERSION="7 (Core)"
[2026-02-06 13:56:17] ID="centos"
[2026-02-06 13:56:17] ID_LIKE="rhel fedora"
[2026-02-06 13:56:17] VERSION_ID="7"
[2026-02-06 13:56:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 13:56:17] ANSI_COLOR="0;31"
[2026-02-06 13:56:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 13:56:17] HOME_URL="https://www.centos.org/"
[2026-02-06 13:56:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 13:56:17] 
[2026-02-06 13:56:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 13:56:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 13:56:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 13:56:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 13:56:17] 
[2026-02-06 13:56:17] 2026-02-06 18:55:10,513 | INFO     | **************************************
[2026-02-06 13:56:17] 2026-02-06 18:55:11,015 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-06 13:56:17] 2026-02-06 18:55:11,029 | INFO     | sufficient remaining disk space (316697214976 B)
[2026-02-06 13:56:17] 2026-02-06 18:55:11,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 13:56:17] 2026-02-06 18:55:11,029 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 13:56:17] 2026-02-06 18:55:11,030 | INFO     | update_server=False
[2026-02-06 13:56:17] 2026-02-06 18:55:11,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 13:56:17] 2026-02-06 18:55:11,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 13:56:17] 2026-02-06 18:55:11,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 13:56:17] 2026-02-06 18:55:11,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 13:56:17] 2026-02-06 18:55:11,031 | INFO     | aborting loop
[2026-02-06 13:56:17] 2026-02-06 18:55:11,401 | INFO     | all data control threads have been joined
[2026-02-06 13:56:17] 2026-02-06 18:55:11,723 | INFO     | all payload control threads have been joined
[2026-02-06 13:56:17] 2026-02-06 18:55:12,036 | INFO     | [job] retrieve thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,037 | INFO     | [job] queue monitor thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,037 | INFO     | [job] job monitor thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,085 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,408 | INFO     | [data] control thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,440 | INFO     | all job control threads have been joined
[2026-02-06 13:56:17] 2026-02-06 18:55:12,629 | INFO     | [payload] validate_post thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,730 | INFO     | [payload] control thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,817 | INFO     | [job] validate thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,878 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:12,885 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:13,031 | INFO     | [payload] failed_post thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:13,036 | INFO     | [data] copytool_out thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:13,447 | INFO     | [job] control thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:13,529 | INFO     | [data] copytool_in thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:14,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 13:56:17] 2026-02-06 18:55:18,026 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:21,403 | INFO     | job.realtimelogging is not enabled
[2026-02-06 13:56:17] 2026-02-06 18:55:22,409 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 13:56:17] 2026-02-06 18:55:42,013 | INFO     | PID=291103 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 13:56:17] 2026-02-06 18:55:42,013 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 13:56:17] 2026-02-06 18:55:42,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 13:56:17] 2026-02-06 18:55:42,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 13:56:17] 2026-02-06 18:56:11,035 | INFO     | [monitor] cgroup control has ended
[2026-02-06 13:56:17] 2026-02-06 18:56:12,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901901784896)>', '<ExcThread(monitor, started 139901529986816)>']
[2026-02-06 13:56:17] 2026-02-06 18:56:13,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 13:56:17] 2026-02-06 18:56:13,178 | INFO     | [monitor] control thread has ended
[2026-02-06 13:56:17] 2026-02-06 18:56:17,739 | INFO     | all workflow threads have been joined
[2026-02-06 13:56:17] 2026-02-06 18:56:17,739 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 13:56:17] 2026-02-06 18:56:17,740 | INFO     | traces error code: 0
[2026-02-06 13:56:17] 2026-02-06 18:56:17,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 13:56:17] 2026-02-06 18:56:17,848 [wrapper] ==== pilot stdout END ====
[2026-02-06 13:56:17] 2026-02-06 18:56:17,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 13:56:17] 2026-02-06 18:56:17,853 [wrapper] pilotpid: 291103
[2026-02-06 13:56:17] 2026-02-06 18:56:17,855 [wrapper] Pilot exit status: 0
[2026-02-06 13:56:17] 2026-02-06 18:56:17,863 [wrapper] pandaids: 7000893513
[2026-02-06 13:56:17] 2026-02-06 18:56:17,881 [wrapper] cleanup supervisor_pilot  301379 291104
[2026-02-06 13:56:17] 2026-02-06 18:56:17,884 [wrapper] Test setup, not cleaning
[2026-02-06 13:56:17] 2026-02-06 18:56:17,886 [wrapper] apfmon messages muted
[2026-02-06 13:56:17] 2026-02-06 18:56:17,888 [wrapper] ==== wrapper stdout END ====
[2026-02-06 13:56:17] 2026-02-06 18:56:17,890 [wrapper] ==== wrapper stderr END ====
[2026-02-06 13:56:17]  *** Error codes and diagnostics ***
[2026-02-06 13:56:17]     "exeErrorCode": 0,
[2026-02-06 13:56:17]     "exeErrorDiag": "",
[2026-02-06 13:56:17]     "pilotErrorCode": 0,
[2026-02-06 13:56:17]     "pilotErrorDiag": "",
[2026-02-06 13:56:17]  *** Listing of results directory ***
[2026-02-06 13:56:17] total 904532
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc    584627 Feb  5 23:07 pilot3.tar.gz
[2026-02-06 13:56:17] -rwx------. 1 boinc boinc     36322 Feb  5 23:10 runpilot2-wrapper.sh
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc      5111 Feb  5 23:14 queuedata.json
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc       100 Feb  6 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 13:56:17] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 09:30 run_atlas
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc       105 Feb  6 09:30 job.xml
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc 655180279 Feb  6 09:30 EVNT.48431078._000237.pool.root.1
[2026-02-06 13:56:17] drwxrwx--x. 2 boinc boinc      4096 Feb  6 09:30 shared
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc    597968 Feb  6 09:30 input.tar.gz
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc     15845 Feb  6 09:30 start_atlas.sh
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc         0 Feb  6 09:30 boinc_setup_complete
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc      6284 Feb  6 09:30 init_data.xml
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc         0 Feb  6 09:30 boinc_lockfile
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc      2559 Feb  6 09:30 pandaJob.out
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc   1009504 Feb  6 09:30 agis_schedconf.cvmfs.json
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc       424 Feb  6 09:30 workernode_map.json
[2026-02-06 13:56:17] drwx------. 5 boinc boinc      4096 Feb  6 09:30 pilot3
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc 261844169 Feb  6 13:54 HITS.48431080._012336.pool.root.1
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc       531 Feb  6 13:54 boinc_task_state.xml
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc        95 Feb  6 13:54 pilot_heartbeat.json
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc      1019 Feb  6 13:55 memory_monitor_summary.json
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc   1513088 Feb  6 13:55 agis_ddmendpoints.agis.ALL.json
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc    435542 Feb  6 13:55 log.48431080._012336.job.log.tgz.1
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc      6318 Feb  6 13:55 heartbeat.json
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc      8192 Feb  6 13:56 boinc_mmap_file
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc        28 Feb  6 13:56 wrapper_checkpoint.txt
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc      4816 Feb  6 13:56 pilotlog.txt
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc   2200201 Feb  6 13:56 log.48431080._012336.job.log.1
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc       357 Feb  6 13:56 output.list
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc       620 Feb  6 13:56 runtime_log
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc   2652160 Feb  6 13:56 result.tar.gz
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc      8772 Feb  6 13:56 runtime_log.err
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc       648 Feb  6 13:56 rKYNDmUMS88n9Rq4apOajLDm4fhM0noT9bVooX4SDmTwWKDmtYyb9m.diag
[2026-02-06 13:56:17] -rw-r--r--. 1 boinc boinc     21291 Feb  6 13:56 stderr.txt
[2026-02-06 13:56:17] HITS file was successfully produced:
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc 261844169 Feb  6 13:54 shared/HITS.pool.root.1
[2026-02-06 13:56:17]  *** Contents of shared directory: ***
[2026-02-06 13:56:17] total 898736
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc 655180279 Feb  6 09:30 ATLAS.root_0
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc    597968 Feb  6 09:30 input.tar.gz
[2026-02-06 13:56:17] -rw-r--r--. 2 boinc boinc     15845 Feb  6 09:30 start_atlas.sh
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc 261844169 Feb  6 13:54 HITS.pool.root.1
[2026-02-06 13:56:17] -rw-------. 1 boinc boinc   2652160 Feb  6 13:56 result.tar.gz
13:56:19 (287100): run_atlas exited; CPU time 61532.174106
13:56:19 (287100): called boinc_finish(0)

</stderr_txt>
]]>

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