Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:44:55 (309421): wrapper (7.7.26015): starting
20:44:55 (309421): wrapper: running run_atlas (--nthreads 4)
[2026-02-06 20:44:55] Arguments: --nthreads 4
[2026-02-06 20:44:55] Threads: 4
[2026-02-06 20:44:55] Checking for CVMFS
[2026-02-06 20:44:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 20:44:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 20:44:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 20:44:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 20:44:56] 2.9.2.0 8228 859 78300 155958 2 50 31081658 36864001 0 130560 0 399743 99.982 37216 20030 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 20:44:56] CVMFS is ok
[2026-02-06 20:44:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 20:44:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 20:44:56] Further information can be found at the LHC@home message board.
[2026-02-06 20:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 20:44:56] Checking for apptainer binary...
[2026-02-06 20:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 20:44:56] Running /usr/bin/apptainer --version
[2026-02-06 20:44:56] apptainer version 1.4.1-1.1
[2026-02-06 20:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 20:44:56] atlasA237
[2026-02-06 20:44:56] apptainer works
[2026-02-06 20:44:56] Set ATHENA_PROC_NUMBER=4
[2026-02-06 20:44:56] Set ATHENA_CORE_NUMBER=4
[2026-02-06 20:44:56] Starting ATLAS job with PandaID=6996409188
[2026-02-06 20:44:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 21:57:19]  *** The last 200 lines of the pilot log: ***
[2026-02-06 21:57:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 21:57:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 21:57:19] 
[2026-02-06 21:57:19] 2026-02-06 20:56:34,474 | INFO     | **************************************
[2026-02-06 21:57:19] 2026-02-06 20:56:34,976 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | INFO     | sufficient remaining disk space (325007179776 B)
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | INFO     | update_server=False
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 21:57:19] 2026-02-06 20:56:34,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 21:57:19] 2026-02-06 20:56:34,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 21:57:19] 2026-02-06 20:56:35,077 | WARNING  | process 318058 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 21:57:19] 2026-02-06 20:56:35,129 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 21:57:19] 2026-02-06 20:56:35,183 | INFO     | all data control threads have been joined
[2026-02-06 21:57:19] 2026-02-06 20:56:35,192 | INFO     | number of running child processes to parent process 318058: 1
[2026-02-06 21:57:19] 2026-02-06 20:56:35,192 | INFO     | maximum number of monitored processes: 6
[2026-02-06 21:57:19] 2026-02-06 20:56:35,192 | INFO     | aborting job monitoring since job object (job id=6996409188) has expired
[2026-02-06 21:57:19] 2026-02-06 20:56:35,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 21:57:19] 2026-02-06 20:56:35,192 | INFO     | will abort loop
[2026-02-06 21:57:19] 2026-02-06 20:56:35,585 | INFO     | all job control threads have been joined
[2026-02-06 21:57:19] 2026-02-06 20:56:35,997 | INFO     | [job] retrieve thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:35,997 | INFO     | [job] queue monitor thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,078 | INFO     | all payload control threads have been joined
[2026-02-06 21:57:19] 2026-02-06 20:56:36,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 21:57:19] 2026-02-06 20:56:36,188 | INFO     | [data] control thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,197 | INFO     | [job] job monitor thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,521 | INFO     | [job] validate thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,590 | INFO     | [job] control thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,698 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,741 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,788 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,950 | INFO     | [data] copytool_in thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:36,983 | INFO     | [payload] validate_post thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:37,083 | INFO     | [payload] control thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:37,485 | INFO     | [payload] failed_post thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:38,161 | INFO     | [data] copytool_out thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:38,997 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:56:45,245 | INFO     | job.realtimelogging is not enabled
[2026-02-06 21:57:19] 2026-02-06 20:56:46,247 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 21:57:19] 2026-02-06 20:57:04,743 | INFO     | PID=313536 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 21:57:19] 2026-02-06 20:57:04,744 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 21:57:19] 2026-02-06 20:57:04,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 21:57:19] 2026-02-06 20:57:04,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 21:57:19] 2026-02-06 20:57:13,966 | INFO     | [monitor] cgroup control has ended
[2026-02-06 21:57:19] 2026-02-06 20:57:14,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039558321984)>', '<ExcThread(monitor, started 140039036049152)>']
[2026-02-06 21:57:19] 2026-02-06 20:57:14,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 21:57:19] 2026-02-06 20:57:14,794 | INFO     | [monitor] control thread has ended
[2026-02-06 21:57:19] 2026-02-06 20:57:19,688 | INFO     | all workflow threads have been joined
[2026-02-06 21:57:19] 2026-02-06 20:57:19,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 21:57:19] 2026-02-06 20:57:19,688 | INFO     | traces error code: 0
[2026-02-06 21:57:19] 2026-02-06 20:57:19,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 21:57:19] 2026-02-06 20:57:19,757 [wrapper] ==== pilot stdout END ====
[2026-02-06 21:57:19] 2026-02-06 20:57:19,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 21:57:19] 2026-02-06 20:57:19,765 [wrapper] pilotpid: 313536
[2026-02-06 21:57:19] 2026-02-06 20:57:19,769 [wrapper] Pilot exit status: 0
[2026-02-06 21:57:19] 2026-02-06 20:57:19,779 [wrapper] pandaids: 6996409188
[2026-02-06 21:57:19] 2026-02-06 20:57:19,805 [wrapper] cleanup supervisor_pilot  327653 313537
[2026-02-06 21:57:19] 2026-02-06 20:57:19,809 [wrapper] Test setup, not cleaning
[2026-02-06 21:57:19] 2026-02-06 20:57:19,812 [wrapper] apfmon messages muted
[2026-02-06 21:57:19] 2026-02-06 20:57:19,816 [wrapper] ==== wrapper stdout END ====
[2026-02-06 21:57:19] 2026-02-06 20:57:19,819 [wrapper] ==== wrapper stderr END ====
[2026-02-06 21:57:19]  *** Error codes and diagnostics ***
[2026-02-06 21:57:19]     "exeErrorCode": 0,
[2026-02-06 21:57:19]     "exeErrorDiag": "",
[2026-02-06 21:57:19]     "pilotErrorCode": 0,
[2026-02-06 21:57:19]     "pilotErrorDiag": "",
[2026-02-06 21:57:19]  *** Listing of results directory ***
[2026-02-06 21:57:19] total 678136
[2026-02-06 21:57:19] -rwx------ 1 boinc boinc     36322 Feb  6 08:40 runpilot2-wrapper.sh
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc    584627 Feb  6 08:42 pilot3.tar.gz
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      5111 Feb  6 08:42 queuedata.json
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc       100 Feb  6 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 21:57:19] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 20:44 run_atlas
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc       105 Feb  6 20:44 job.xml
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc 503045096 Feb  6 20:44 EVNT.48442027._000041.pool.root.1
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc    597950 Feb  6 20:44 input.tar.gz
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc     15845 Feb  6 20:44 start_atlas.sh
[2026-02-06 21:57:19] drwxrwx--x 2 boinc boinc      4096 Feb  6 20:44 shared
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc         0 Feb  6 20:44 boinc_setup_complete
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      6371 Feb  6 20:44 init_data.xml
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc         0 Feb  6 20:44 boinc_lockfile
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      2527 Feb  6 20:44 pandaJob.out
[2026-02-06 21:57:19] -rw------- 1 boinc boinc   1009512 Feb  6 20:45 agis_schedconf.cvmfs.json
[2026-02-06 21:57:19] -rw------- 1 boinc boinc   1513088 Feb  6 20:45 agis_ddmendpoints.agis.ALL.json
[2026-02-06 21:57:19] -rw------- 1 boinc boinc       429 Feb  6 20:45 workernode_map.json
[2026-02-06 21:57:19] drwx------ 5 boinc boinc      4096 Feb  6 20:45 pilot3
[2026-02-06 21:57:19] -rw------- 1 boinc boinc 185669226 Feb  6 21:56 HITS.48442031._002006.pool.root.1
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc       530 Feb  6 21:56 boinc_task_state.xml
[2026-02-06 21:57:19] -rw------- 1 boinc boinc      1025 Feb  6 21:56 memory_monitor_summary.json
[2026-02-06 21:57:19] -rw------- 1 boinc boinc    250769 Feb  6 21:56 log.48442031._002006.job.log.tgz.1
[2026-02-06 21:57:19] -rw------- 1 boinc boinc      6324 Feb  6 21:56 heartbeat.json
[2026-02-06 21:57:19] -rw------- 1 boinc boinc        95 Feb  6 21:57 pilot_heartbeat.json
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      8192 Feb  6 21:57 boinc_mmap_file
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc        27 Feb  6 21:57 wrapper_checkpoint.txt
[2026-02-06 21:57:19] -rw------- 1 boinc boinc      5341 Feb  6 21:57 pilotlog.txt
[2026-02-06 21:57:19] -rw------- 1 boinc boinc    633129 Feb  6 21:57 log.48442031._002006.job.log.1
[2026-02-06 21:57:19] -rw------- 1 boinc boinc       357 Feb  6 21:57 output.list
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc       620 Feb  6 21:57 runtime_log
[2026-02-06 21:57:19] -rw------- 1 boinc boinc    901120 Feb  6 21:57 result.tar.gz
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      8911 Feb  6 21:57 runtime_log.err
[2026-02-06 21:57:19] -rw------- 1 boinc boinc       660 Feb  6 21:57 6jLODmvcV88n9Rq4apOajLDm4fhM0noT9bVooX4SDmN2XKDmZsc6cn.diag
[2026-02-06 21:57:19] -rw-r--r-- 1 boinc boinc      8815 Feb  6 21:57 stderr.txt
[2026-02-06 21:57:19] HITS file was successfully produced:
[2026-02-06 21:57:19] -rw------- 1 boinc boinc 185669226 Feb  6 21:56 shared/HITS.pool.root.1
[2026-02-06 21:57:19]  *** Contents of shared directory: ***
[2026-02-06 21:57:19] total 674064
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc 503045096 Feb  6 20:44 ATLAS.root_0
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc    597950 Feb  6 20:44 input.tar.gz
[2026-02-06 21:57:19] -rw-r--r-- 2 boinc boinc     15845 Feb  6 20:44 start_atlas.sh
[2026-02-06 21:57:19] -rw------- 1 boinc boinc 185669226 Feb  6 21:56 HITS.pool.root.1
[2026-02-06 21:57:19] -rw------- 1 boinc boinc    901120 Feb  6 21:57 result.tar.gz
21:57:21 (309421): run_atlas exited; CPU time 16174.036632
21:57:21 (309421): called boinc_finish(0)

</stderr_txt>
]]>

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