Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:17:08 (910178): wrapper (7.7.26015): starting
04:17:08 (910178): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 04:17:08] Arguments: --nthreads 12
[2026-02-06 04:17:08] Threads: 12
[2026-02-06 04:17:08] Checking for CVMFS
[2026-02-06 04:17:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 04:17:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 04:17:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 04:17:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 04:17:11] 2.11.5.0 3295111 96876 234004 155943 0 190 31018612 45568000 22896 130560 0 859707201 99.817 465508755 19708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-06 04:17:11] CVMFS is ok
[2026-02-06 04:17:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 04:17:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 04:17:11] Further information can be found at the LHC@home message board.
[2026-02-06 04:17:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 04:17:11] Checking for apptainer binary...
[2026-02-06 04:17:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 04:17:11] Running /usr/bin/apptainer --version
[2026-02-06 04:17:12] apptainer version 1.4.1-1.el9
[2026-02-06 04:17:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 04:17:23] wns0096.triumf.lcg
[2026-02-06 04:17:23] apptainer works
[2026-02-06 04:17:23] Set ATHENA_PROC_NUMBER=12
[2026-02-06 04:17:23] Set ATHENA_CORE_NUMBER=12
[2026-02-06 04:17:23] Starting ATLAS job with PandaID=6996409154
[2026-02-06 04:17:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 04:23:36]  *** The last 200 lines of the pilot log: ***
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | WARNING  | wrong length of table data, x=[1770380389.0], y=[3050.0] (must be same and length>=4)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . Timing measurements:
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . get job = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . initial setup = 31 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload setup = 46 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-in = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload execution = 72 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-out = 1 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . log creation = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996409154/pilotlog.txt
[2026-02-06 04:23:36] 2026-02-06 12:22:33,912 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 04:23:36] - Log from pilotlog.txt -
[2026-02-06 04:23:36] 2026-02-06 12:22:33,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996409154/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | INFO     | extracted standard info from prmon json
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | WARNING  | wrong length of table data, x=[1770380389.0], y=[3050.0] (must be same and length>=4)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . Timing measurements:
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . get job = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . initial setup = 31 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload setup = 46 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-in = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload execution = 72 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-out = 1 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . log creation = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996409154/pilotlog.txt
[2026-02-06 04:23:36] 2026-02-06 12:22:33,912 | WARNING  | 
[2026-02-06 04:23:36] [begin log extracts]
[2026-02-06 04:23:36] - Log from pilotlog.txt -
[2026-02-06 04:23:36] 2026-02-06 12:22:33,878 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6996409154/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | INFO     | extracted standard info from prmon json
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 04:23:36] 2026-02-06 12:22:33,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | WARNING  | wrong length of table data, x=[1770380389.0], y=[3050.0] (must be same and length>=4)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . Timing measurements:
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . get job = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . initial setup = 31 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload setup = 46 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-in = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . payload execution = 72 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . stage-out = 1 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,880 | INFO     | . log creation = 0 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | ..............................
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 04:23:36] 2026-02-06 12:22:33,895 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996409154/pilotlog.txt
[2026-02-06 04:23:36] [end log extracts]
[2026-02-06 04:23:36] 2026-02-06 12:22:33,913 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,914 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | 
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | job summary report
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | --------------------------------------------------
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | PanDA job id: 6996409154
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | task id: 48442031
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 04:20:23,308 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | pilot state: failed 
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | transexitcode: 65
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | exeerrorcode: 65
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | exitcode: 65
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | cpuconsumptiontime: 15 s
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | nevents: 0
[2026-02-06 04:23:36] 2026-02-06 12:22:33,980 | INFO     | neventsw: 0
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | pid: 918869
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | pgrp: 918869
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | corecount: 12
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | event service: False
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | sizes: {0: 2272901, 1: 2283066, 122: 2306314, 123: 2306290, 124: 2310610, 127: 2310638, 243: 2310932}
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | --------------------------------------------------
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | 
[2026-02-06 04:23:36] 2026-02-06 12:22:33,981 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 04:23:36] 2026-02-06 12:22:34,067 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,067 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,067 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | job 6996409154 has completed (purged errors)
[2026-02-06 04:23:36] 2026-02-06 12:22:34,068 | INFO     | overall cleanup function is called
[2026-02-06 04:23:36] 2026-02-06 12:22:35,075 | INFO     | --- collectZombieJob: --- 10, [918869]
[2026-02-06 04:23:36] 2026-02-06 12:22:35,075 | INFO     | zombie collector waiting for pid 918869
[2026-02-06 04:23:36] 2026-02-06 12:22:35,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 04:23:36] 2026-02-06 12:22:35,075 | INFO     | collected zombie processes
[2026-02-06 04:23:36] 2026-02-06 12:22:35,075 | INFO     | will attempt to kill all subprocesses of pid=918869
[2026-02-06 04:23:36] 2026-02-06 12:22:35,461 | INFO     | process IDs to be killed: [918869] (in reverse order)
[2026-02-06 04:23:36] 2026-02-06 12:22:35,756 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 04:23:36] 2026-02-06 12:22:35,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 04:23:36] 2026-02-06 12:22:35,809 | INFO     | did not find any defunct processes belonging to 918869
[2026-02-06 04:23:36] 2026-02-06 12:22:35,843 | INFO     | did not find any defunct processes belonging to 918869
[2026-02-06 04:23:36] 2026-02-06 12:22:35,870 | INFO     | ready for new job
[2026-02-06 04:23:36] 2026-02-06 12:22:35,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 04:23:36] 2026-02-06 12:22:35,871 | INFO     | **************************************
[2026-02-06 04:23:36] 2026-02-06 12:22:35,871 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 04:23:36] 2026-02-06 12:22:35,871 | INFO     | **************************************
[2026-02-06 04:23:36] 2026-02-06 12:22:35,871 | INFO     | 
[2026-02-06 04:23:36] 2026-02-06 12:22:35,873 | INFO     | architecture information:
[2026-02-06 04:23:36] 2026-02-06 12:22:35,890 | INFO     | executing command: cat /etc/os-release
[2026-02-06 04:23:36] 2026-02-06 12:22:36,056 | INFO     | cat /etc/os-release:
[2026-02-06 04:23:36] NAME="CentOS Linux"
[2026-02-06 04:23:36] VERSION="7 (Core)"
[2026-02-06 04:23:36] ID="centos"
[2026-02-06 04:23:36] ID_LIKE="rhel fedora"
[2026-02-06 04:23:36] VERSION_ID="7"
[2026-02-06 04:23:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 04:23:36] ANSI_COLOR="0;31"
[2026-02-06 04:23:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 04:23:36] HOME_URL="https://www.centos.org/"
[2026-02-06 04:23:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 04:23:36] 
[2026-02-06 04:23:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 04:23:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 04:23:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 04:23:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 04:23:36] 
[2026-02-06 04:23:36] 2026-02-06 12:22:36,057 | INFO     | **************************************
[2026-02-06 04:23:36] 2026-02-06 12:22:36,560 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 04:23:36] 2026-02-06 12:22:36,622 | INFO     | sufficient remaining disk space (2151314096128 B)
[2026-02-06 04:23:36] 2026-02-06 12:22:36,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 04:23:36] 2026-02-06 12:22:36,623 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 04:23:36] 2026-02-06 12:22:36,623 | INFO     | update_server=False
[2026-02-06 04:23:36] 2026-02-06 12:22:36,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 04:23:36] 2026-02-06 12:22:36,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 04:23:36] 2026-02-06 12:22:36,632 | INFO     | all data control threads have been joined
[2026-02-06 04:23:36] 2026-02-06 12:22:37,002 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 04:23:36] 2026-02-06 12:22:37,002 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 04:23:36] 2026-02-06 12:22:37,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 04:23:36] 2026-02-06 12:22:37,002 | INFO     | will abort loop
[2026-02-06 04:23:36] 2026-02-06 12:22:37,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 04:23:36] 2026-02-06 12:22:37,188 | INFO     | all payload control threads have been joined
[2026-02-06 04:23:36] 2026-02-06 12:22:37,629 | INFO     | [job] retrieve thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:37,638 | INFO     | [data] control thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:37,672 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:37,835 | INFO     | all job control threads have been joined
[2026-02-06 04:23:36] 2026-02-06 12:22:38,008 | INFO     | [job] job monitor thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,054 | INFO     | [data] copytool_in thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,158 | INFO     | [job] validate thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,158 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,197 | INFO     | [payload] control thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,443 | INFO     | [payload] validate_post thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,513 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,631 | INFO     | [data] copytool_out thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,840 | INFO     | [job] control thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,969 | INFO     | [payload] failed_post thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:38,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 04:23:36] 2026-02-06 12:22:39,992 | INFO     | [job] queue monitor thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:22:41,161 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 04:23:36] 2026-02-06 12:23:06,428 | INFO     | PID=913999 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 04:23:36] 2026-02-06 12:23:06,428 | INFO     | .. there are 42 such processes running
[2026-02-06 04:23:36] 2026-02-06 12:23:06,428 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 04:23:36] 2026-02-06 12:23:06,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 04:23:36] 2026-02-06 12:23:06,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 04:23:36] 2026-02-06 12:23:29,255 | INFO     | [monitor] cgroup control has ended
[2026-02-06 04:23:36] 2026-02-06 12:23:29,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968565241664)>', '<ExcThread(monitor, started 139968244586240)>']
[2026-02-06 04:23:36] 2026-02-06 12:23:29,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 04:23:36] 2026-02-06 12:23:29,615 | INFO     | [monitor] control thread has ended
[2026-02-06 04:23:36] 2026-02-06 12:23:34,474 | INFO     | all workflow threads have been joined
[2026-02-06 04:23:36] 2026-02-06 12:23:34,474 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 04:23:36] 2026-02-06 12:23:34,474 | INFO     | traces error code: 0
[2026-02-06 04:23:36] 2026-02-06 12:23:34,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 04:23:36] 2026-02-06 12:23:34,713 [wrapper] ==== pilot stdout END ====
[2026-02-06 04:23:36] 2026-02-06 12:23:34,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 04:23:36] 2026-02-06 12:23:34,749 [wrapper] pilotpid: 913999
[2026-02-06 04:23:36] 2026-02-06 12:23:34,763 [wrapper] Pilot exit status: 0
[2026-02-06 04:23:36] 2026-02-06 12:23:34,950 [wrapper] pandaids: 6996409154
[2026-02-06 04:23:36] 2026-02-06 12:23:35,307 [wrapper] cleanup supervisor_pilot  914005 914000
[2026-02-06 04:23:36] 2026-02-06 12:23:35,345 [wrapper] Test setup, not cleaning
[2026-02-06 04:23:36] 2026-02-06 12:23:35,380 [wrapper] apfmon messages muted
[2026-02-06 04:23:36] 2026-02-06 12:23:35,413 [wrapper] ==== wrapper stdout END ====
[2026-02-06 04:23:36] 2026-02-06 12:23:35,449 [wrapper] ==== wrapper stderr END ====
[2026-02-06 04:23:36]  *** Error codes and diagnostics ***
[2026-02-06 04:23:36]     "exeErrorCode": 65,
[2026-02-06 04:23:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 04:23:36]     "pilotErrorCode": 1305,
[2026-02-06 04:23:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 04:23:36]  *** Listing of results directory ***
[2026-02-06 04:23:36] total 486540
[2026-02-06 04:23:36] -rwx------. 1 boinc boinc     36322 Feb  5 23:40 runpilot2-wrapper.sh
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc      5111 Feb  5 23:41 queuedata.json
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc    584627 Feb  5 23:42 pilot3.tar.gz
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc       100 Feb  6 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 04:23:36] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 04:17 run_atlas
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc       105 Feb  6 04:17 job.xml
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc      6594 Feb  6 04:17 init_data.xml
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc 494047634 Feb  6 04:17 EVNT.48442027._000040.pool.root.1
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc     15845 Feb  6 04:17 start_atlas.sh
[2026-02-06 04:23:36] drwxrwx--x. 2 boinc boinc      4096 Feb  6 04:17 shared
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc    597951 Feb  6 04:17 input.tar.gz
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc         0 Feb  6 04:17 boinc_lockfile
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc      2527 Feb  6 04:17 pandaJob.out
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc   1009512 Feb  6 04:17 agis_schedconf.cvmfs.json
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc   1513144 Feb  6 04:18 agis_ddmendpoints.agis.ALL.json
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc       445 Feb  6 04:18 workernode_map.json
[2026-02-06 04:23:36] drwx------. 5 boinc boinc      4096 Feb  6 04:18 pilot3
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc       523 Feb  6 04:20 boinc_task_state.xml
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc       952 Feb  6 04:20 memory_monitor_summary.json
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc     21866 Feb  6 04:20 log.48442031._001972.job.log.tgz.1
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc      7038 Feb  6 04:22 heartbeat.json
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc        95 Feb  6 04:23 pilot_heartbeat.json
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc      8192 Feb  6 04:23 boinc_mmap_file
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc        22 Feb  6 04:23 wrapper_checkpoint.txt
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc      5004 Feb  6 04:23 pilotlog.txt
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc     90963 Feb  6 04:23 log.48442031._001972.job.log.1
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc       188 Feb  6 04:23 output.list
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc       620 Feb  6 04:23 runtime_log
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc    133120 Feb  6 04:23 result.tar.gz
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc      8635 Feb  6 04:23 runtime_log.err
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc       646 Feb  6 04:23 6jVNDmvcV88n9Rq4apOajLDm4fhM0noT9bVooX4SDm61XKDmNWtJlm.diag
[2026-02-06 04:23:36] -rw-r--r--. 1 boinc boinc     21802 Feb  6 04:23 stderr.txt
[2026-02-06 04:23:36] No HITS result produced
[2026-02-06 04:23:36]  *** Contents of shared directory: ***
[2026-02-06 04:23:36] total 483208
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc 494047634 Feb  6 04:17 ATLAS.root_0
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc     15845 Feb  6 04:17 start_atlas.sh
[2026-02-06 04:23:36] -rw-r--r--. 2 boinc boinc    597951 Feb  6 04:17 input.tar.gz
[2026-02-06 04:23:36] -rw-------. 1 boinc boinc    133120 Feb  6 04:23 result.tar.gz
04:23:37 (910178): run_atlas exited; CPU time 25.063355
04:23:37 (910178): called boinc_finish(0)

</stderr_txt>
]]>

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