Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:25:59 (2802318): wrapper (7.7.26015): starting
08:25:59 (2802318): wrapper: running run_atlas (--nthreads 2)
[2026-02-06 08:25:59] Arguments: --nthreads 2
[2026-02-06 08:25:59] Threads: 2
[2026-02-06 08:25:59] Checking for CVMFS
[2026-02-06 08:26:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 08:26:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 08:26:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 08:26:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 08:26:01] 2.9.2.0 2802513 0 30040 155933 3 1 30121391 36864000 0 130560 0 0 0.000 1336 4720 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 08:26:01] CVMFS is ok
[2026-02-06 08:26:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 08:26:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 08:26:01] Further information can be found at the LHC@home message board.
[2026-02-06 08:26:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 08:26:01] Checking for apptainer binary...
[2026-02-06 08:26:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 08:26:01] Running /usr/bin/apptainer --version
[2026-02-06 08:26:01] apptainer version 1.4.1-1.1
[2026-02-06 08:26:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 08:26:01] magicA244
[2026-02-06 08:26:01] apptainer works
[2026-02-06 08:26:01] Set ATHENA_PROC_NUMBER=2
[2026-02-06 08:26:01] Set ATHENA_CORE_NUMBER=2
[2026-02-06 08:26:01] Starting ATLAS job with PandaID=6995860633
[2026-02-06 08:26:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 10:30:41]  *** The last 200 lines of the pilot log: ***
[2026-02-06 10:30:41] 2026-02-06 09:30:11,926 | INFO     | [job] retrieve thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:11,970 | INFO     | all job control threads have been joined
[2026-02-06 10:30:41] 2026-02-06 09:30:12,241 | INFO     | [job] job monitor thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,272 | INFO     | [payload] control thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,495 | INFO     | [payload] failed_post thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,743 | INFO     | [job] validate thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,831 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,849 | INFO     | [data] control thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,872 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,901 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,902 | INFO     | [data] copytool_in thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,926 | INFO     | [data] copytool_out thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:12,976 | INFO     | [job] control thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:13,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:13,407 | INFO     | [payload] validate_post thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:13,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 10:30:41] 2026-02-06 09:30:17,611 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 10:30:41] 2026-02-06 09:30:35,293 | INFO     | [monitor] cgroup control has ended
[2026-02-06 10:30:41] 2026-02-06 09:30:35,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148284249920)>', '<ExcThread(monitor, started 140147626583808)>']
[2026-02-06 10:30:41] 2026-02-06 09:30:40,717 | INFO     | all workflow threads have been joined
[2026-02-06 10:30:41] 2026-02-06 09:30:40,718 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 10:30:41] 2026-02-06 09:30:40,718 | INFO     | traces error code: 0
[2026-02-06 10:30:41] 2026-02-06 09:30:40,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 10:30:41] 2026-02-06 09:30:41,498 | INFO     | PID=2806573 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 10:30:41] 2026-02-06 09:30:41,498 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 10:30:41] 2026-02-06 09:30:41,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 10:30:41] 2026-02-06 09:30:41,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 10:30:41] 2026-02-06 09:30:41,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 10:30:41] 2026-02-06 09:30:41,499 | INFO     | [monitor] control thread has ended
[2026-02-06 10:30:41] 2026-02-06 09:30:41,539 [wrapper] ==== pilot stdout END ====
[2026-02-06 10:30:41] 2026-02-06 09:30:41,541 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 10:30:41] 2026-02-06 09:30:41,543 [wrapper] pilotpid: 2806573
[2026-02-06 10:30:41] 2026-02-06 09:30:41,545 [wrapper] Pilot exit status: 0
[2026-02-06 10:30:41] 2026-02-06 09:30:41,551 [wrapper] pandaids: 6995860633
[2026-02-06 10:30:41] 2026-02-06 09:30:41,564 [wrapper] cleanup supervisor_pilot 2816118 2806574
[2026-02-06 10:30:41] 2026-02-06 09:30:41,566 [wrapper] Test setup, not cleaning
[2026-02-06 10:30:41] 2026-02-06 09:30:41,568 [wrapper] apfmon messages muted
[2026-02-06 10:30:41] 2026-02-06 09:30:41,570 [wrapper] ==== wrapper stdout END ====
[2026-02-06 10:30:41] 2026-02-06 09:30:41,572 [wrapper] ==== wrapper stderr END ====
[2026-02-06 10:30:41]  *** Error codes and diagnostics ***
[2026-02-06 10:30:41]     "exeErrorCode": 0,
[2026-02-06 10:30:41]     "exeErrorDiag": "",
[2026-02-06 10:30:41]     "pilotErrorCode": 0,
[2026-02-06 10:30:41]     "pilotErrorDiag": "",
[2026-02-06 10:30:41]  *** Listing of results directory ***
[2026-02-06 10:30:41] total 667108
[2026-02-06 10:30:41] -rwx------ 1 boinc boinc     36322 Feb  6 05:56 runpilot2-wrapper.sh
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:58 pilot3.tar.gz
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:58 queuedata.json
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc       100 Feb  6 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 10:30:41] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 08:25 run_atlas
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc       105 Feb  6 08:25 job.xml
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc 494567066 Feb  6 08:25 EVNT.48318032._000182.pool.root.1
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc    597956 Feb  6 08:25 input.tar.gz
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc     15845 Feb  6 08:25 start_atlas.sh
[2026-02-06 10:30:41] drwxrwx--x 2 boinc boinc      4096 Feb  6 08:25 shared
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc         0 Feb  6 08:25 boinc_setup_complete
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      6209 Feb  6 08:25 init_data.xml
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc         0 Feb  6 08:25 boinc_lockfile
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      2536 Feb  6 08:26 pandaJob.out
[2026-02-06 10:30:41] -rw------- 1 boinc boinc   1007453 Feb  6 08:26 agis_schedconf.cvmfs.json
[2026-02-06 10:30:41] -rw------- 1 boinc boinc   1513144 Feb  6 08:26 agis_ddmendpoints.agis.ALL.json
[2026-02-06 10:30:41] -rw------- 1 boinc boinc       422 Feb  6 08:26 workernode_map.json
[2026-02-06 10:30:41] drwx------ 5 boinc boinc      4096 Feb  6 08:26 pilot3
[2026-02-06 10:30:41] -rw------- 1 boinc boinc 181880302 Feb  6 10:29 HITS.48318034._009538.pool.root.1
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc       530 Feb  6 10:29 boinc_task_state.xml
[2026-02-06 10:30:41] -rw------- 1 boinc boinc        95 Feb  6 10:29 pilot_heartbeat.json
[2026-02-06 10:30:41] -rw------- 1 boinc boinc      1010 Feb  6 10:30 memory_monitor_summary.json
[2026-02-06 10:30:41] -rw------- 1 boinc boinc    307872 Feb  6 10:30 log.48318034._009538.job.log.tgz.1
[2026-02-06 10:30:41] -rw------- 1 boinc boinc      6298 Feb  6 10:30 heartbeat.json
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc        27 Feb  6 10:30 wrapper_checkpoint.txt
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      8192 Feb  6 10:30 boinc_mmap_file
[2026-02-06 10:30:41] -rw------- 1 boinc boinc       747 Feb  6 10:30 pilotlog.txt
[2026-02-06 10:30:41] -rw------- 1 boinc boinc   1069172 Feb  6 10:30 log.48318034._009538.job.log.1
[2026-02-06 10:30:41] -rw------- 1 boinc boinc       357 Feb  6 10:30 output.list
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc       620 Feb  6 10:30 runtime_log
[2026-02-06 10:30:41] -rw------- 1 boinc boinc   1392640 Feb  6 10:30 result.tar.gz
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      8911 Feb  6 10:30 runtime_log.err
[2026-02-06 10:30:41] -rw------- 1 boinc boinc       660 Feb  6 10:30 jfZNDme4S88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmesXKDm3szXlm.diag
[2026-02-06 10:30:41] -rw-r--r-- 1 boinc boinc      6423 Feb  6 10:30 stderr.txt
[2026-02-06 10:30:41] HITS file was successfully produced:
[2026-02-06 10:30:41] -rw------- 1 boinc boinc 181880302 Feb  6 10:29 shared/HITS.pool.root.1
[2026-02-06 10:30:41]  *** Contents of shared directory: ***
[2026-02-06 10:30:41] total 662564
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc 494567066 Feb  6 08:25 ATLAS.root_0
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc    597956 Feb  6 08:25 input.tar.gz
[2026-02-06 10:30:41] -rw-r--r-- 2 boinc boinc     15845 Feb  6 08:25 start_atlas.sh
[2026-02-06 10:30:41] -rw------- 1 boinc boinc 181880302 Feb  6 10:29 HITS.pool.root.1
[2026-02-06 10:30:41] -rw------- 1 boinc boinc   1392640 Feb  6 10:30 result.tar.gz
10:30:43 (2802318): run_atlas exited; CPU time 14458.691843
10:30:43 (2802318): called boinc_finish(0)

</stderr_txt>
]]>

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