Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:32:58 (325230): wrapper (7.7.26015): starting
22:32:58 (325230): wrapper: running run_atlas (--nthreads 12)
[2026-02-05 22:32:58] Arguments: --nthreads 12
[2026-02-05 22:32:58] Threads: 12
[2026-02-05 22:32:58] Checking for CVMFS
[2026-02-05 22:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 22:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 22:32:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 22:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 22:32:58] 2.11.5.0 2947479 27583 210528 155931 3 408 26389414 45568001 19542 130560 0 290769355 99.826 162635500 22826 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-05 22:32:58] CVMFS is ok
[2026-02-05 22:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 22:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 22:32:58] Further information can be found at the LHC@home message board.
[2026-02-05 22:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 22:32:58] Checking for apptainer binary...
[2026-02-05 22:32:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 22:32:58] Running /usr/bin/apptainer --version
[2026-02-05 22:32:58] apptainer version 1.4.1-1.el9
[2026-02-05 22:32:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 22:32:59] wns0034.triumf.lcg
[2026-02-05 22:32:59] apptainer works
[2026-02-05 22:32:59] Set ATHENA_PROC_NUMBER=12
[2026-02-05 22:32:59] Set ATHENA_CORE_NUMBER=12
[2026-02-05 22:32:59] Starting ATLAS job with PandaID=7000923262
[2026-02-05 22:32:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 22:36:20]  *** The last 200 lines of the pilot log: ***
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . Timing measurements:
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . get job = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . initial setup = 6 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload setup = 4 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-in = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload execution = 15 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-out = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . log creation = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000923262/pilotlog.txt
[2026-02-05 22:36:20] 2026-02-06 06:35:46,580 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-05 22:36:20] - Log from pilotlog.txt -
[2026-02-05 22:36:20] 2026-02-06 06:35:46,564 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:36:20] 2026-02-06 06:35:46,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | found no stored workdir sizes
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | INFO     | will not add max space = 0 B to job metrics
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | wrong length of table data, x=[1770359612.0], y=[1804.0] (must be same and length>=4)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . Timing measurements:
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . get job = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . initial setup = 6 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload setup = 4 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-in = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload execution = 15 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-out = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . log creation = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000923262/pilotlog.txt
[2026-02-05 22:36:20] 2026-02-06 06:35:46,580 | WARNING  | 
[2026-02-05 22:36:20] [begin log extracts]
[2026-02-05 22:36:20] - Log from pilotlog.txt -
[2026-02-05 22:36:20] 2026-02-06 06:35:46,564 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:36:20] 2026-02-06 06:35:46,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | found no stored workdir sizes
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | INFO     | will not add max space = 0 B to job metrics
[2026-02-05 22:36:20] 2026-02-06 06:35:46,565 | WARNING  | wrong length of table data, x=[1770359612.0], y=[1804.0] (must be same and length>=4)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . Timing measurements:
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . get job = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . initial setup = 6 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload setup = 4 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-in = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . payload execution = 15 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . stage-out = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | . log creation = 0 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | ..............................
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:36:20] 2026-02-06 06:35:46,566 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000923262/pilotlog.txt
[2026-02-05 22:36:20] [end log extracts]
[2026-02-05 22:36:20] 2026-02-06 06:35:46,580 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,581 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | 
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | job summary report
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | --------------------------------------------------
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | PanDA job id: 7000923262
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | task id: 48431096
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-05 22:33:39,428 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | pilot state: failed 
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | transexitcode: 65
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | exeerrorcode: 65
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | exitcode: 65
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | cpuconsumptiontime: 14 s
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | nevents: 0
[2026-02-05 22:36:20] 2026-02-06 06:35:46,998 | INFO     | neventsw: 0
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | pid: 339725
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | pgrp: 339725
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | corecount: 12
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | event service: False
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | sizes: {0: 2282871, 1: 2283105, 11: 2283105, 23: 2306332, 24: 2310624, 27: 2310652, 144: 2310946}
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | --------------------------------------------------
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | 
[2026-02-05 22:36:20] 2026-02-06 06:35:46,999 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-05 22:36:20] 2026-02-06 06:35:47,014 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | job 7000923262 has completed (purged errors)
[2026-02-05 22:36:20] 2026-02-06 06:35:47,016 | INFO     | overall cleanup function is called
[2026-02-05 22:36:20] 2026-02-06 06:35:47,817 | INFO     | PID=329088 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-05 22:36:20] 2026-02-06 06:35:47,817 | INFO     | .. there are 35 such processes running
[2026-02-05 22:36:20] 2026-02-06 06:35:48,021 | INFO     | --- collectZombieJob: --- 10, [339725]
[2026-02-05 22:36:20] 2026-02-06 06:35:48,022 | INFO     | zombie collector waiting for pid 339725
[2026-02-05 22:36:20] 2026-02-06 06:35:48,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 22:36:20] 2026-02-06 06:35:48,022 | INFO     | collected zombie processes
[2026-02-05 22:36:20] 2026-02-06 06:35:48,022 | INFO     | will attempt to kill all subprocesses of pid=339725
[2026-02-05 22:36:20] 2026-02-06 06:35:48,212 | INFO     | process IDs to be killed: [339725] (in reverse order)
[2026-02-05 22:36:20] 2026-02-06 06:35:48,290 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 22:36:20] 2026-02-06 06:35:48,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 22:36:20] 2026-02-06 06:35:48,299 | INFO     | did not find any defunct processes belonging to 339725
[2026-02-05 22:36:20] 2026-02-06 06:35:48,307 | INFO     | did not find any defunct processes belonging to 339725
[2026-02-05 22:36:20] 2026-02-06 06:35:48,307 | INFO     | ready for new job
[2026-02-05 22:36:20] 2026-02-06 06:35:48,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 22:36:20] 2026-02-06 06:35:48,309 | INFO     | **************************************
[2026-02-05 22:36:20] 2026-02-06 06:35:48,309 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-05 22:36:20] 2026-02-06 06:35:48,309 | INFO     | **************************************
[2026-02-05 22:36:20] 2026-02-06 06:35:48,309 | INFO     | 
[2026-02-05 22:36:20] 2026-02-06 06:35:48,311 | INFO     | architecture information:
[2026-02-05 22:36:20] 2026-02-06 06:35:48,311 | INFO     | executing command: cat /etc/os-release
[2026-02-05 22:36:20] 2026-02-06 06:35:48,322 | INFO     | cat /etc/os-release:
[2026-02-05 22:36:20] NAME="CentOS Linux"
[2026-02-05 22:36:20] VERSION="7 (Core)"
[2026-02-05 22:36:20] ID="centos"
[2026-02-05 22:36:20] ID_LIKE="rhel fedora"
[2026-02-05 22:36:20] VERSION_ID="7"
[2026-02-05 22:36:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 22:36:20] ANSI_COLOR="0;31"
[2026-02-05 22:36:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 22:36:20] HOME_URL="https://www.centos.org/"
[2026-02-05 22:36:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 22:36:20] 
[2026-02-05 22:36:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 22:36:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 22:36:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 22:36:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 22:36:20] 
[2026-02-05 22:36:20] 2026-02-06 06:35:48,323 | INFO     | **************************************
[2026-02-05 22:36:20] 2026-02-06 06:35:48,826 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-05 22:36:20] 2026-02-06 06:35:48,838 | INFO     | sufficient remaining disk space (2069117272064 B)
[2026-02-05 22:36:20] 2026-02-06 06:35:48,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 22:36:20] 2026-02-06 06:35:48,839 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 22:36:20] 2026-02-06 06:35:48,839 | INFO     | update_server=False
[2026-02-05 22:36:20] 2026-02-06 06:35:48,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 22:36:20] 2026-02-06 06:35:48,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 22:36:20] 2026-02-06 06:35:48,842 | INFO     | all job control threads have been joined
[2026-02-05 22:36:20] 2026-02-06 06:35:49,186 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-05 22:36:20] 2026-02-06 06:35:49,187 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-05 22:36:20] 2026-02-06 06:35:49,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:36:20] 2026-02-06 06:35:49,187 | INFO     | will abort loop
[2026-02-05 22:36:20] 2026-02-06 06:35:49,583 | INFO     | all data control threads have been joined
[2026-02-05 22:36:20] 2026-02-06 06:35:49,844 | INFO     | [job] control thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:49,844 | INFO     | [job] retrieve thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:49,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 22:36:20] 2026-02-06 06:35:49,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:49,899 | INFO     | all payload control threads have been joined
[2026-02-05 22:36:20] 2026-02-06 06:35:49,999 | INFO     | [data] copytool_in thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:50,192 | INFO     | [job] job monitor thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:50,588 | INFO     | [data] control thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:50,598 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:50,883 | INFO     | [payload] failed_post thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:50,904 | INFO     | [payload] control thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:51,071 | INFO     | [job] validate thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:51,229 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:51,317 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:51,329 | INFO     | [payload] validate_post thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:51,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:36:20] 2026-02-06 06:35:51,884 | INFO     | [data] copytool_out thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:52,654 | INFO     | [job] queue monitor thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:35:52,845 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 22:36:20] 2026-02-06 06:36:11,884 | INFO     | [monitor] cgroup control has ended
[2026-02-05 22:36:20] 2026-02-06 06:36:13,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859880499008)>', '<ExcThread(monitor, started 139859335296768)>']
[2026-02-05 22:36:20] 2026-02-06 06:36:18,290 | INFO     | all workflow threads have been joined
[2026-02-05 22:36:20] 2026-02-06 06:36:18,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 22:36:20] 2026-02-06 06:36:18,291 | INFO     | traces error code: 0
[2026-02-05 22:36:20] 2026-02-06 06:36:18,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 22:36:20] 2026-02-06 06:36:20,107 | INFO     | PID=329088 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-05 22:36:20] 2026-02-06 06:36:20,108 | INFO     | .. there are 35 such processes running
[2026-02-05 22:36:20] 2026-02-06 06:36:20,108 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 22:36:20] 2026-02-06 06:36:20,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 22:36:20] 2026-02-06 06:36:20,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 22:36:20] 2026-02-06 06:36:20,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 22:36:20] 2026-02-06 06:36:20,109 | INFO     | [monitor] control thread has ended
[2026-02-05 22:36:20] 2026-02-06 06:36:20,239 [wrapper] ==== pilot stdout END ====
[2026-02-05 22:36:20] 2026-02-06 06:36:20,242 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 22:36:20] 2026-02-06 06:36:20,244 [wrapper] pilotpid: 329088
[2026-02-05 22:36:20] 2026-02-06 06:36:20,246 [wrapper] Pilot exit status: 0
[2026-02-05 22:36:20] 2026-02-06 06:36:20,254 [wrapper] pandaids: 7000923262
[2026-02-05 22:36:20] 2026-02-06 06:36:20,303 [wrapper] cleanup supervisor_pilot  329097 329089
[2026-02-05 22:36:20] 2026-02-06 06:36:20,306 [wrapper] Test setup, not cleaning
[2026-02-05 22:36:20] 2026-02-06 06:36:20,308 [wrapper] apfmon messages muted
[2026-02-05 22:36:20] 2026-02-06 06:36:20,310 [wrapper] ==== wrapper stdout END ====
[2026-02-05 22:36:20] 2026-02-06 06:36:20,312 [wrapper] ==== wrapper stderr END ====
[2026-02-05 22:36:20]  *** Error codes and diagnostics ***
[2026-02-05 22:36:20]     "exeErrorCode": 65,
[2026-02-05 22:36:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-05 22:36:20]     "pilotErrorCode": 1305,
[2026-02-05 22:36:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-05 22:36:20]  *** Listing of results directory ***
[2026-02-05 22:36:20] total 667700
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc    584627 Feb  5 20:30 pilot3.tar.gz
[2026-02-05 22:36:20] -rwx------. 1 boinc boinc     36322 Feb  5 20:33 runpilot2-wrapper.sh
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc      5111 Feb  5 20:36 queuedata.json
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc       100 Feb  5 22:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 22:36:20] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 22:32 run_atlas
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc       105 Feb  5 22:32 job.xml
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc      6594 Feb  5 22:32 init_data.xml
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc 679591303 Feb  5 22:32 EVNT.48431094._000271.pool.root.1
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc     15845 Feb  5 22:32 start_atlas.sh
[2026-02-05 22:36:20] drwxrwx--x. 2 boinc boinc      4096 Feb  5 22:32 shared
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc    597958 Feb  5 22:32 input.tar.gz
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc         0 Feb  5 22:32 boinc_lockfile
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc      2553 Feb  5 22:32 pandaJob.out
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc   1007445 Feb  5 22:33 agis_schedconf.cvmfs.json
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc   1513144 Feb  5 22:33 agis_ddmendpoints.agis.ALL.json
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc       444 Feb  5 22:33 workernode_map.json
[2026-02-05 22:36:20] drwx------. 5 boinc boinc      4096 Feb  5 22:33 pilot3
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc       521 Feb  5 22:33 boinc_task_state.xml
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc       964 Feb  5 22:33 memory_monitor_summary.json
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc     20667 Feb  5 22:33 log.48431096._005988.job.log.tgz.1
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc      7029 Feb  5 22:35 heartbeat.json
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc      8192 Feb  5 22:36 boinc_mmap_file
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc        22 Feb  5 22:36 wrapper_checkpoint.txt
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc        95 Feb  5 22:36 pilot_heartbeat.json
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc       822 Feb  5 22:36 pilotlog.txt
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc     80233 Feb  5 22:36 log.48431096._005988.job.log.1
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc       188 Feb  5 22:36 output.list
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc       620 Feb  5 22:36 runtime_log
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc    122880 Feb  5 22:36 result.tar.gz
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc      8635 Feb  5 22:36 runtime_log.err
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc       645 Feb  5 22:36 7WCLDmWiS88n9Rq4apOajLDm4fhM0noT9bVooX4SDmpDXKDm9XIdLo.diag
[2026-02-05 22:36:20] -rw-r--r--. 1 boinc boinc     21735 Feb  5 22:36 stderr.txt
[2026-02-05 22:36:20] No HITS result produced
[2026-02-05 22:36:20]  *** Contents of shared directory: ***
[2026-02-05 22:36:20] total 664388
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc 679591303 Feb  5 22:32 ATLAS.root_0
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc     15845 Feb  5 22:32 start_atlas.sh
[2026-02-05 22:36:20] -rw-r--r--. 2 boinc boinc    597958 Feb  5 22:32 input.tar.gz
[2026-02-05 22:36:20] -rw-------. 1 boinc boinc    122880 Feb  5 22:36 result.tar.gz
22:36:21 (325230): run_atlas exited; CPU time 17.280197
22:36:21 (325230): called boinc_finish(0)

</stderr_txt>
]]>

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