Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:51:54 (3793464): wrapper (7.7.26015): starting
16:51:54 (3793464): wrapper: running run_atlas (--nthreads 4)
[2026-02-06 16:51:54] Arguments: --nthreads 4
[2026-02-06 16:51:54] Threads: 4
[2026-02-06 16:51:54] Checking for CVMFS
[2026-02-06 16:51:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 16:51:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 16:51:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 16:51:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 16:51:55] 2.9.2.0 3652207 672 78784 155951 1 50 23973280 36864001 0 130560 0 396869 99.987 28887 5974 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 16:51:55] CVMFS is ok
[2026-02-06 16:51:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 16:51:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 16:51:55] Further information can be found at the LHC@home message board.
[2026-02-06 16:51:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 16:51:55] Checking for apptainer binary...
[2026-02-06 16:51:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 16:51:55] Running /usr/bin/apptainer --version
[2026-02-06 16:51:55] apptainer version 1.4.1-1.1
[2026-02-06 16:51:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 16:51:55] magicA244a
[2026-02-06 16:51:55] apptainer works
[2026-02-06 16:51:55] Set ATHENA_PROC_NUMBER=4
[2026-02-06 16:51:55] Set ATHENA_CORE_NUMBER=4
[2026-02-06 16:51:55] Starting ATLAS job with PandaID=6996408624
[2026-02-06 16:51:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 18:20:18]  *** The last 200 lines of the pilot log: ***
[2026-02-06 18:20:18] 2026-02-06 17:19:36,999 | INFO     | all data control threads have been joined
[2026-02-06 18:20:18] 2026-02-06 17:19:37,415 | INFO     | [job] retrieve thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:37,415 | INFO     | [job] queue monitor thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:37,493 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:37,508 | INFO     | all job control threads have been joined
[2026-02-06 18:20:18] 2026-02-06 17:19:37,672 | INFO     | all payload control threads have been joined
[2026-02-06 18:20:18] 2026-02-06 17:19:37,783 | INFO     | [job] job monitor thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:37,826 | INFO     | [payload] validate_post thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,003 | INFO     | [payload] failed_post thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,004 | INFO     | [data] control thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,394 | INFO     | [job] validate thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,415 | INFO     | [data] copytool_out thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,449 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,449 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,513 | INFO     | [job] control thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,637 | INFO     | [data] copytool_in thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:38,677 | INFO     | [payload] control thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:39,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 18:20:18] 2026-02-06 17:19:43,625 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:19:46,623 | INFO     | job.realtimelogging is not enabled
[2026-02-06 18:20:18] 2026-02-06 17:19:47,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 18:20:18] 2026-02-06 17:20:06,352 | INFO     | PID=3797562 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 18:20:18] 2026-02-06 17:20:06,353 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 18:20:18] 2026-02-06 17:20:06,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 18:20:18] 2026-02-06 17:20:06,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 18:20:18] 2026-02-06 17:20:11,844 | INFO     | [monitor] cgroup control has ended
[2026-02-06 18:20:18] 2026-02-06 17:20:13,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491016824640)>', '<ExcThread(monitor, started 140490359944960)>']
[2026-02-06 18:20:18] 2026-02-06 17:20:14,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 18:20:18] 2026-02-06 17:20:14,396 | INFO     | [monitor] control thread has ended
[2026-02-06 18:20:18] 2026-02-06 17:20:18,854 | INFO     | all workflow threads have been joined
[2026-02-06 18:20:18] 2026-02-06 17:20:18,854 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 18:20:18] 2026-02-06 17:20:18,855 | INFO     | traces error code: 0
[2026-02-06 18:20:18] 2026-02-06 17:20:18,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 18:20:18] 2026-02-06 17:20:18,909 [wrapper] ==== pilot stdout END ====
[2026-02-06 18:20:18] 2026-02-06 17:20:18,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 18:20:18] 2026-02-06 17:20:18,914 [wrapper] pilotpid: 3797562
[2026-02-06 18:20:18] 2026-02-06 17:20:18,917 [wrapper] Pilot exit status: 0
[2026-02-06 18:20:18] 2026-02-06 17:20:18,924 [wrapper] pandaids: 6996408624
[2026-02-06 18:20:18] 2026-02-06 17:20:18,942 [wrapper] cleanup supervisor_pilot 3807311 3797563
[2026-02-06 18:20:18] 2026-02-06 17:20:18,945 [wrapper] Test setup, not cleaning
[2026-02-06 18:20:18] 2026-02-06 17:20:18,947 [wrapper] apfmon messages muted
[2026-02-06 18:20:18] 2026-02-06 17:20:18,950 [wrapper] ==== wrapper stdout END ====
[2026-02-06 18:20:18] 2026-02-06 17:20:18,952 [wrapper] ==== wrapper stderr END ====
[2026-02-06 18:20:18]  *** Error codes and diagnostics ***
[2026-02-06 18:20:18]     "exeErrorCode": 0,
[2026-02-06 18:20:18]     "exeErrorDiag": "",
[2026-02-06 18:20:18]     "pilotErrorCode": 0,
[2026-02-06 18:20:18]     "pilotErrorDiag": "",
[2026-02-06 18:20:18]  *** Listing of results directory ***
[2026-02-06 18:20:18] total 892740
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc    584627 Feb  6 06:55 pilot3.tar.gz
[2026-02-06 18:20:18] -rwx------ 1 boinc boinc     36322 Feb  6 06:58 runpilot2-wrapper.sh
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      5111 Feb  6 06:58 queuedata.json
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc       100 Feb  6 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 18:20:18] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 16:51 run_atlas
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc       105 Feb  6 16:51 job.xml
[2026-02-06 18:20:18] -rw-r--r-- 2 boinc boinc 649662492 Feb  6 16:51 EVNT.48431111._000050.pool.root.1
[2026-02-06 18:20:18] -rw-r--r-- 2 boinc boinc    597956 Feb  6 16:51 input.tar.gz
[2026-02-06 18:20:18] -rw-r--r-- 2 boinc boinc     15845 Feb  6 16:51 start_atlas.sh
[2026-02-06 18:20:18] drwxrwx--x 2 boinc boinc      4096 Feb  6 16:51 shared
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc         0 Feb  6 16:51 boinc_setup_complete
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      6438 Feb  6 16:51 init_data.xml
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc         0 Feb  6 16:51 boinc_lockfile
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      2544 Feb  6 16:51 pandaJob.out
[2026-02-06 18:20:18] -rw------- 1 boinc boinc   1009512 Feb  6 16:52 agis_schedconf.cvmfs.json
[2026-02-06 18:20:18] -rw------- 1 boinc boinc   1513144 Feb  6 16:52 agis_ddmendpoints.agis.ALL.json
[2026-02-06 18:20:18] -rw------- 1 boinc boinc       427 Feb  6 16:52 workernode_map.json
[2026-02-06 18:20:18] drwx------ 5 boinc boinc      4096 Feb  6 16:52 pilot3
[2026-02-06 18:20:18] -rw------- 1 boinc boinc 258443939 Feb  6 18:19 HITS.48431113._002490.pool.root.1
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc       530 Feb  6 18:19 boinc_task_state.xml
[2026-02-06 18:20:18] -rw------- 1 boinc boinc      1016 Feb  6 18:19 memory_monitor_summary.json
[2026-02-06 18:20:18] -rw------- 1 boinc boinc        95 Feb  6 18:19 pilot_heartbeat.json
[2026-02-06 18:20:18] -rw------- 1 boinc boinc    302672 Feb  6 18:19 log.48431113._002490.job.log.tgz.1
[2026-02-06 18:20:18] -rw------- 1 boinc boinc      6308 Feb  6 18:19 heartbeat.json
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      8192 Feb  6 18:19 boinc_mmap_file
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc        27 Feb  6 18:19 wrapper_checkpoint.txt
[2026-02-06 18:20:18] -rw------- 1 boinc boinc      5344 Feb  6 18:20 pilotlog.txt
[2026-02-06 18:20:18] -rw------- 1 boinc boinc    765718 Feb  6 18:20 log.48431113._002490.job.log.1
[2026-02-06 18:20:18] -rw------- 1 boinc boinc       357 Feb  6 18:20 output.list
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc       620 Feb  6 18:20 runtime_log
[2026-02-06 18:20:18] -rw------- 1 boinc boinc   1085440 Feb  6 18:20 result.tar.gz
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      8916 Feb  6 18:20 runtime_log.err
[2026-02-06 18:20:18] -rw------- 1 boinc boinc       661 Feb  6 18:20 6BCMDmY2T88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkFYKDmBFiOGo.diag
[2026-02-06 18:20:18] -rw-r--r-- 1 boinc boinc      6832 Feb  6 18:20 stderr.txt
[2026-02-06 18:20:19] HITS file was successfully produced:
[2026-02-06 18:20:19] -rw------- 1 boinc boinc 258443939 Feb  6 18:19 shared/HITS.pool.root.1
[2026-02-06 18:20:19]  *** Contents of shared directory: ***
[2026-02-06 18:20:19] total 888496
[2026-02-06 18:20:19] -rw-r--r-- 2 boinc boinc 649662492 Feb  6 16:51 ATLAS.root_0
[2026-02-06 18:20:19] -rw-r--r-- 2 boinc boinc    597956 Feb  6 16:51 input.tar.gz
[2026-02-06 18:20:19] -rw-r--r-- 2 boinc boinc     15845 Feb  6 16:51 start_atlas.sh
[2026-02-06 18:20:19] -rw------- 1 boinc boinc 258443939 Feb  6 18:19 HITS.pool.root.1
[2026-02-06 18:20:19] -rw------- 1 boinc boinc   1085440 Feb  6 18:20 result.tar.gz
18:20:20 (3793464): run_atlas exited; CPU time 19952.926004
18:20:20 (3793464): called boinc_finish(0)

</stderr_txt>
]]>

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